RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 KLRC3Q07444 240 aa12.87□□□□□ -0.35
SEC13-214ENST00000476597 PLS1Q14651 629 aa12.87□□□□□ -0.35
SEC13-214ENST00000476597 FAM83BQ5T0W9 1011 aa12.87□□□□□ -0.35
SEC13-214ENST00000476597 DPP9Q86TI2 863 aa12.87□□□□□ -0.35
SEC13-214ENST00000476597 TICAM2Q86XR7 235 aa12.87□□□□□ -0.35
SEC13-214ENST00000476597 ABRAQ8N0Z2 381 aa12.87□□□□□ -0.35
SEC13-214ENST00000476597 NBPF3Q9H094 633 aa12.87□□□□□ -0.35
SEC13-214ENST00000476597 NAPBQ9H115 298 aa12.87□□□□□ -0.35
SEC13-214ENST00000476597 FBXO28Q9NVF7 368 aa12.87□□□□□ -0.35
SEC13-214ENST00000476597 MTMR4Q9NYA4 1195 aa12.87□□□□□ -0.35
SEC13-214ENST00000476597 PPP1R9AQ9ULJ8 1098 aa12.87□□□□□ -0.35
SEC13-214ENST00000476597 PLXNB2O15031 1838 aa12.86□□□□□ -0.35
SEC13-214ENST00000476597 VWA5AO00534 786 aa12.86□□□□□ -0.35
SEC13-214ENST00000476597 FOXP2O15409 715 aa12.86□□□□□ -0.35
SEC13-214ENST00000476597 RAD21O60216 631 aa12.86□□□□□ -0.35
SEC13-214ENST00000476597 EVI5O60447 810 aa12.86□□□□□ -0.35
SEC13-214ENST00000476597 COBLO75128 1261 aa12.86□□□□□ -0.35
SEC13-214ENST00000476597 IGHDP01880 384 aa12.86□□□□□ -0.35
SEC13-214ENST00000476597 SLC3A2P08195 630 aaKnown RBP12.86□□□□□ -0.35
SEC13-214ENST00000476597 CYP2C19P33261 490 aa12.86□□□□□ -0.35
SEC13-214ENST00000476597 STAT3P40763 770 aa12.86□□□□□ -0.35
SEC13-214ENST00000476597 PDE4BQ07343 736 aa12.86□□□□□ -0.35
SEC13-214ENST00000476597 PPARAQ07869 468 aa12.86□□□□□ -0.35
SEC13-214ENST00000476597 OLFML2BQ68BL8 750 aa12.86□□□□□ -0.35
SEC13-214ENST00000476597 SAMD1Q6SPF0 538 aaPredicted RBP12.86□□□□□ -0.35
SEC13-214ENST00000476597 CCDC129Q6ZRS4 1044 aa12.86□□□□□ -0.35
SEC13-214ENST00000476597 NCAPG2Q86XI2 1143 aa12.86□□□□□ -0.35
SEC13-214ENST00000476597 RIOX2Q8IUF8 465 aa12.86□□□□□ -0.35
SEC13-214ENST00000476597 REPS2Q8NFH8 660 aa12.86□□□□□ -0.35
SEC13-214ENST00000476597 NEDD1Q8NHV4 660 aa12.86□□□□□ -0.35
SEC13-214ENST00000476597 EXOC6Q8TAG9 804 aa12.86□□□□□ -0.35
SEC13-214ENST00000476597 HELLSQ9NRZ9 838 aa12.86□□□□□ -0.35
SEC13-214ENST00000476597 SYNPO2Q9UMS6 1093 aa12.86□□□□□ -0.35
SEC13-214ENST00000476597 NDUFB10O96000 172 aa12.85□□□□□ -0.35
SEC13-214ENST00000476597 TFAP4Q01664 338 aa12.85□□□□□ -0.35
SEC13-214ENST00000476597 VPS53Q5VIR6 699 aa12.85□□□□□ -0.35
SEC13-214ENST00000476597 B4GALNT3Q6L9W6 998 aa12.85□□□□□ -0.35
SEC13-214ENST00000476597 CEP95Q96GE4 821 aa12.85□□□□□ -0.35
SEC13-214ENST00000476597 NUP88Q99567 741 aaPredicted RBP12.85□□□□□ -0.35
SEC13-214ENST00000476597 LNPKQ9C0E8 428 aa12.85□□□□□ -0.35
SEC13-214ENST00000476597 C11orf49Q9H6J7 331 aa12.85□□□□□ -0.35
SEC13-214ENST00000476597 SLC5A4Q9NY91 659 aa12.85□□□□□ -0.35
SEC13-214ENST00000476597 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.85□□□□□ -0.35
SEC13-214ENST00000476597 BAZ2AQ9UIF9 1905 aaKnown RBP12.84□□□□□ -0.35
SEC13-214ENST00000476597 TTLL1O95922 423 aa12.84□□□□□ -0.35
SEC13-214ENST00000476597 TSPY3P0CV98 308 aa12.84□□□□□ -0.35
SEC13-214ENST00000476597 TSPY8P0CW00 308 aa12.84□□□□□ -0.35
SEC13-214ENST00000476597 COL6A1P12109 1028 aa12.84□□□□□ -0.35
SEC13-214ENST00000476597 FCER1AP12319 257 aa12.84□□□□□ -0.35
SEC13-214ENST00000476597 NUCB1Q02818 461 aa12.84□□□□□ -0.35
SEC13-214ENST00000476597 ALX1Q15699 326 aa12.84□□□□□ -0.35
SEC13-214ENST00000476597 FAM47AQ5JRC9 791 aa12.84□□□□□ -0.35
SEC13-214ENST00000476597 CHRDL2Q6WN34 429 aa12.84□□□□□ -0.35
SEC13-214ENST00000476597 CHD1LQ86WJ1 897 aa12.84□□□□□ -0.35
SEC13-214ENST00000476597 PRPF38AQ8NAV1 312 aaKnown RBP12.84□□□□□ -0.35
SEC13-214ENST00000476597 TRPV1Q8NER1 839 aa12.84□□□□□ -0.35
SEC13-214ENST00000476597 SLF1Q9BQI6 1058 aa12.84□□□□□ -0.35
SEC13-214ENST00000476597 PRO3102Q9H379 93 aa12.84□□□□□ -0.35
SEC13-214ENST00000476597 INCENPQ9NQS7 918 aa12.84□□□□□ -0.35
SEC13-214ENST00000476597 DDX20Q9UHI6 824 aaKnown RBP12.84□□□□□ -0.35
SEC13-214ENST00000476597 ANAPC4Q9UJX5 808 aa12.84□□□□□ -0.35
SEC13-214ENST00000476597 ZNF214Q9UL59 606 aaPredicted RBP12.84□□□□□ -0.35
SEC13-214ENST00000476597 MSCO60682 206 aa12.83□□□□□ -0.36
SEC13-214ENST00000476597 CYBAP13498 195 aa12.83□□□□□ -0.36
SEC13-214ENST00000476597 CNGA1P29973 690 aa12.83□□□□□ -0.36
SEC13-214ENST00000476597 COPB2P35606 906 aa12.83□□□□□ -0.36
SEC13-214ENST00000476597 MCMDC2Q4G0Z9 681 aa12.83□□□□□ -0.36
SEC13-214ENST00000476597 PLEKHM2Q8IWE5 1019 aa12.83□□□□□ -0.36
SEC13-214ENST00000476597 GMCL1P1Q8NEA9 526 aa12.83□□□□□ -0.36
SEC13-214ENST00000476597 FAM227BQ96M60 508 aa12.83□□□□□ -0.36
SEC13-214ENST00000476597 OSBPL3Q9H4L5 887 aa12.83□□□□□ -0.36
SEC13-214ENST00000476597 TACC3Q9Y6A5 838 aa12.83□□□□□ -0.36
SEC13-214ENST00000476597 TRIOBPQ9H2D6 2365 aa12.83□□□□□ -0.36
SEC13-214ENST00000476597 PLIN4Q96Q06 1357 aa12.82□□□□□ -0.36
SEC13-214ENST00000476597 A0A0D9SFI3 127 aa12.82□□□□□ -0.36
SEC13-214ENST00000476597 TRIM6-TRIM34B2RNG4 842 aa12.82□□□□□ -0.36
SEC13-214ENST00000476597 ATP2A1O14983 1001 aa12.82□□□□□ -0.36
SEC13-214ENST00000476597 ZBED4O75132 1171 aa12.82□□□□□ -0.36
SEC13-214ENST00000476597 FGAP02671 866 aa12.82□□□□□ -0.36
SEC13-214ENST00000476597 FGRP09769 529 aa12.82□□□□□ -0.36
SEC13-214ENST00000476597 FXR1P51114 621 aaKnown RBP eCLIP12.82□□□□□ -0.36
SEC13-214ENST00000476597 CTDSPL2Q05D32 466 aa12.82□□□□□ -0.36
SEC13-214ENST00000476597 KCTD2Q14681 263 aa12.82□□□□□ -0.36
SEC13-214ENST00000476597 ZNF792Q3KQV3 632 aa12.82□□□□□ -0.36
SEC13-214ENST00000476597 MAML3Q96JK9 1138 aa12.82□□□□□ -0.36
SEC13-214ENST00000476597 MMP19Q99542 508 aa12.82□□□□□ -0.36
SEC13-214ENST00000476597 TEX13BQ9BXU2 312 aa12.82□□□□□ -0.36
SEC13-214ENST00000476597 IL17RBQ9NRM6 502 aa12.82□□□□□ -0.36
SEC13-214ENST00000476597 RBM27Q9P2N5 1060 aaKnown RBP12.82□□□□□ -0.36
SEC13-214ENST00000476597 FEM1BQ9UK73 627 aa12.82□□□□□ -0.36
SEC13-214ENST00000476597 DIS3Q9Y2L1 958 aaKnown RBP12.82□□□□□ -0.36
SEC13-214ENST00000476597 PFASO15067 1338 aa12.82□□□□□ -0.36
SEC13-214ENST00000476597 SZT2Q5T011 3432 aa12.82□□□□□ -0.36
SEC13-214ENST00000476597 MYH7P12883 1935 aa12.82□□□□□ -0.36
SEC13-214ENST00000476597 RLFQ13129 1914 aa12.82□□□□□ -0.36
SEC13-214ENST00000476597 ORC4O43929 436 aa12.81□□□□□ -0.36
SEC13-214ENST00000476597 PGK2P07205 417 aa12.81□□□□□ -0.36
SEC13-214ENST00000476597 BMP3P12645 472 aa12.81□□□□□ -0.36
SEC13-214ENST00000476597 NOVP48745 357 aa12.81□□□□□ -0.36
SEC13-214ENST00000476597 NMIQ13287 307 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms