RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 TRIML1Q8N9V2 468 aa16.03■□□□□ 0.16
UBXN11-214ENST00000475591 UBR3Q6ZT12 1888 aa16.03■□□□□ 0.16
UBXN11-214ENST00000475591 ZBTB22O15209 634 aa16.03■□□□□ 0.16
UBXN11-214ENST00000475591 ADRA2BP18089 450 aa16.03■□□□□ 0.16
UBXN11-214ENST00000475591 HEATR3Q7Z4Q2 680 aa16.03■□□□□ 0.16
UBXN11-214ENST00000475591 AMOTL1Q8IY63 956 aa16.03■□□□□ 0.16
UBXN11-214ENST00000475591 TBC1D16Q8TBP0 767 aa16.03■□□□□ 0.16
UBXN11-214ENST00000475591 ANKS1AQ92625 1134 aa16.03■□□□□ 0.16
UBXN11-214ENST00000475591 MTRQ99707 1265 aa16.03■□□□□ 0.16
UBXN11-214ENST00000475591 KCND1Q9NSA2 647 aa16.03■□□□□ 0.16
UBXN11-214ENST00000475591 SNED1Q8TER0 1413 aa16.03■□□□□ 0.16
UBXN11-214ENST00000475591 LDHCP07864 332 aa16.02■□□□□ 0.16
UBXN11-214ENST00000475591 IL1R1P14778 569 aa16.02■□□□□ 0.16
UBXN11-214ENST00000475591 CDK8P49336 464 aa16.02■□□□□ 0.16
UBXN11-214ENST00000475591 NCBP1Q09161 790 aaKnown RBP16.02■□□□□ 0.16
UBXN11-214ENST00000475591 E2F4Q16254 413 aa16.02■□□□□ 0.16
UBXN11-214ENST00000475591 RBM17Q96I25 401 aaKnown RBP16.02■□□□□ 0.16
UBXN11-214ENST00000475591 DACH1Q9UI36 760 aa16.02■□□□□ 0.16
UBXN11-214ENST00000475591 PCDHA4Q9UN74 947 aa16.02■□□□□ 0.16
UBXN11-214ENST00000475591 FLT1P17948 1338 aa16.02■□□□□ 0.16
UBXN11-214ENST00000475591 C6orf229H3BNL8 230 aa16.02■□□□□ 0.15
UBXN11-214ENST00000475591 ONECUT3O60422 494 aaPredicted RBP16.02■□□□□ 0.15
UBXN11-214ENST00000475591 ATP2B4P23634 1241 aa16.02■□□□□ 0.15
UBXN11-214ENST00000475591 C4orf32Q8N8J7 132 aa16.02■□□□□ 0.15
UBXN11-214ENST00000475591 MAP7D2Q96T17 732 aa16.02■□□□□ 0.15
UBXN11-214ENST00000475591 GPR75-ASB3A0A0A6YYF3 556 aa16.01■□□□□ 0.15
UBXN11-214ENST00000475591 RHBDL3P58872 404 aa16.01■□□□□ 0.15
UBXN11-214ENST00000475591 EYA3Q99504 573 aa16.01■□□□□ 0.15
UBXN11-214ENST00000475591 ZMYND15Q9H091 742 aa16.01■□□□□ 0.15
UBXN11-214ENST00000475591 CDK5RAP2Q96SN8 1893 aa16.01■□□□□ 0.15
UBXN11-214ENST00000475591 DDX60LQ5H9U9 1706 aaKnown RBP16.01■□□□□ 0.15
UBXN11-214ENST00000475591 PP2D1A8MPX8 630 aa16.01■□□□□ 0.15
UBXN11-214ENST00000475591 RIMBP2O15034 1052 aa16.01■□□□□ 0.15
UBXN11-214ENST00000475591 TRIM37O94972 964 aa16.01■□□□□ 0.15
UBXN11-214ENST00000475591 TRAPPC10P48553 1259 aa16.01■□□□□ 0.15
UBXN11-214ENST00000475591 CUL4BQ13620 913 aa16.01■□□□□ 0.15
UBXN11-214ENST00000475591 TMX1Q9H3N1 280 aa16.01■□□□□ 0.15
UBXN11-214ENST00000475591 M0R2N6 131 aa16■□□□□ 0.15
UBXN11-214ENST00000475591 STXBP3O00186 592 aa16■□□□□ 0.15
UBXN11-214ENST00000475591 CALML3P27482 149 aa16■□□□□ 0.15
UBXN11-214ENST00000475591 ADKP55263 362 aaKnown RBP16■□□□□ 0.15
UBXN11-214ENST00000475591 INF2Q27J81 1249 aa16■□□□□ 0.15
UBXN11-214ENST00000475591 PDXDC2PQ6P474 469 aa16■□□□□ 0.15
UBXN11-214ENST00000475591 USP17L2Q6R6M4 530 aa16■□□□□ 0.15
UBXN11-214ENST00000475591 ANKRD7Q92527 254 aa16■□□□□ 0.15
UBXN11-214ENST00000475591 TMEM60Q9H2L4 133 aa16■□□□□ 0.15
UBXN11-214ENST00000475591 TCP11L1Q9NUJ3 509 aa16■□□□□ 0.15
UBXN11-214ENST00000475591 PCDHA6Q9UN73 950 aa16■□□□□ 0.15
UBXN11-214ENST00000475591 PCDHA8Q9Y5H6 950 aa16■□□□□ 0.15
UBXN11-214ENST00000475591 SYNRGQ9UMZ2 1314 aa16■□□□□ 0.15
UBXN11-214ENST00000475591 PALM3A6NDB9 673 aaPredicted RBP16■□□□□ 0.15
UBXN11-214ENST00000475591 PPP1R3GB7ZBB8 358 aa16■□□□□ 0.15
UBXN11-214ENST00000475591 F8W031 263 aaPredicted RBP16■□□□□ 0.15
UBXN11-214ENST00000475591 POLRMTO00411 1230 aaKnown RBP16■□□□□ 0.15
UBXN11-214ENST00000475591 TEX33O43247 280 aa16■□□□□ 0.15
UBXN11-214ENST00000475591 MYO1BO43795 1136 aa16■□□□□ 0.15
UBXN11-214ENST00000475591 HSPA1LP34931 641 aa16■□□□□ 0.15
UBXN11-214ENST00000475591 TBX2Q13207 712 aaPredicted RBP16■□□□□ 0.15
UBXN11-214ENST00000475591 SYT10Q6XYQ8 523 aa16■□□□□ 0.15
UBXN11-214ENST00000475591 C16orf86Q6ZW13 317 aa16■□□□□ 0.15
UBXN11-214ENST00000475591 TMEM139Q8IV31 216 aa16■□□□□ 0.15
UBXN11-214ENST00000475591 NOL12Q9UGY1 213 aaKnown RBP eCLIP16■□□□□ 0.15
UBXN11-214ENST00000475591 V9GYY5 206 aaPredicted RBP16■□□□□ 0.15
UBXN11-214ENST00000475591 A0A0U1RQG5 324 aaPredicted RBP15.99■□□□□ 0.15
UBXN11-214ENST00000475591 PSDA5PKW4 1024 aaPredicted RBP15.99■□□□□ 0.15
UBXN11-214ENST00000475591 KLRF2D3W0D1 207 aa15.99■□□□□ 0.15
UBXN11-214ENST00000475591 ERCC5P28715 1186 aaPredicted RBP15.99■□□□□ 0.15
UBXN11-214ENST00000475591 GTF2IP78347 998 aa15.99■□□□□ 0.15
UBXN11-214ENST00000475591 KARSQ15046 597 aaKnown RBP15.99■□□□□ 0.15
UBXN11-214ENST00000475591 HOMER1Q86YM7 354 aa15.99■□□□□ 0.15
UBXN11-214ENST00000475591 TRPC5Q9UL62 973 aaPredicted RBP15.99■□□□□ 0.15
UBXN11-214ENST00000475591 CCDC194A0A1B0GVG4 234 aa15.99■□□□□ 0.15
UBXN11-214ENST00000475591 PICALMQ13492 652 aa15.99■□□□□ 0.15
UBXN11-214ENST00000475591 APTXQ7Z2E3 356 aaKnown RBP15.99■□□□□ 0.15
UBXN11-214ENST00000475591 IQUBQ8NA54 791 aa15.99■□□□□ 0.15
UBXN11-214ENST00000475591 CEP95Q96GE4 821 aa15.99■□□□□ 0.15
UBXN11-214ENST00000475591 GSDMAQ96QA5 445 aa15.99■□□□□ 0.15
UBXN11-214ENST00000475591 MXD3Q9BW11 206 aa15.99■□□□□ 0.15
UBXN11-214ENST00000475591 SH3GLB2Q9NR46 395 aa15.99■□□□□ 0.15
UBXN11-214ENST00000475591 BARHL2Q9NY43 387 aa15.99■□□□□ 0.15
UBXN11-214ENST00000475591 ZNF215Q9UL58 517 aaPredicted RBP15.99■□□□□ 0.15
UBXN11-214ENST00000475591 CTNND2Q9UQB3 1225 aa15.99■□□□□ 0.15
UBXN11-214ENST00000475591 NRDCO43847 1150 aa15.98■□□□□ 0.15
UBXN11-214ENST00000475591 AEBP2Q6ZN18 517 aaPredicted RBP15.98■□□□□ 0.15
UBXN11-214ENST00000475591 MTERF4Q7Z6M4 381 aaKnown RBP15.98■□□□□ 0.15
UBXN11-214ENST00000475591 KIF18AQ8NI77 898 aa15.98■□□□□ 0.15
UBXN11-214ENST00000475591 CCDC34Q96HJ3 373 aa15.98■□□□□ 0.15
UBXN11-214ENST00000475591 VAT1LQ9HCJ6 419 aa15.98■□□□□ 0.15
UBXN11-214ENST00000475591 BBOX1O75936 387 aa15.98■□□□□ 0.15
UBXN11-214ENST00000475591 KCNJ6P48051 423 aa15.98■□□□□ 0.15
UBXN11-214ENST00000475591 GNAQP50148 359 aa15.98■□□□□ 0.15
UBXN11-214ENST00000475591 NR1I3Q14994 352 aa15.98■□□□□ 0.15
UBXN11-214ENST00000475591 SPECC1LQ69YQ0 1117 aa15.98■□□□□ 0.15
UBXN11-214ENST00000475591 CLEC10AQ8IUN9 316 aa15.98■□□□□ 0.15
UBXN11-214ENST00000475591 TC2NQ8N9U0 490 aa15.98■□□□□ 0.15
UBXN11-214ENST00000475591 PLIN2Q99541 437 aa15.98■□□□□ 0.15
UBXN11-214ENST00000475591 SPATA1Q5VX52 437 aa15.97■□□□□ 0.15
UBXN11-214ENST00000475591 MAPK8IP1Q9UQF2 711 aa15.97■□□□□ 0.15
UBXN11-214ENST00000475591 DAGLAQ9Y4D2 1042 aa15.97■□□□□ 0.15
UBXN11-214ENST00000475591 A0A1B0GTH6 734 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms