RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 TRIM32Q13049 653 aa18.95■□□□□ 0.62
ITGB1-210ENST00000474568 CENPQQ7L2Z9 268 aaPredicted RBP18.95■□□□□ 0.62
ITGB1-210ENST00000474568 SPATC1LQ9H0A9 340 aa18.95■□□□□ 0.62
ITGB1-210ENST00000474568 RNF208Q9H0X6 261 aa18.95■□□□□ 0.62
ITGB1-210ENST00000474568 UNC93B1Q9H1C4 597 aa18.95■□□□□ 0.62
ITGB1-210ENST00000474568 IL17RBQ9NRM6 502 aa18.95■□□□□ 0.62
ITGB1-210ENST00000474568 GREB1LQ9C091 1923 aaPredicted RBP18.95■□□□□ 0.62
ITGB1-210ENST00000474568 ZNF213O14771 459 aa18.94■□□□□ 0.62
ITGB1-210ENST00000474568 CHMLP26374 656 aa18.94■□□□□ 0.62
ITGB1-210ENST00000474568 SLFN13Q68D06 897 aa18.94■□□□□ 0.62
ITGB1-210ENST00000474568 NKX2-3Q8TAU0 364 aa18.94■□□□□ 0.62
ITGB1-210ENST00000474568 PXYLP1Q8TE99 480 aa18.94■□□□□ 0.62
ITGB1-210ENST00000474568 SOCS4Q8WXH5 440 aa18.94■□□□□ 0.62
ITGB1-210ENST00000474568 MKL1Q969V6 931 aa18.94■□□□□ 0.62
ITGB1-210ENST00000474568 PPP1R9AQ9ULJ8 1098 aa18.94■□□□□ 0.62
ITGB1-210ENST00000474568 ERCC3P19447 782 aa18.93■□□□□ 0.62
ITGB1-210ENST00000474568 TMEM132BQ14DG7 1078 aa18.93■□□□□ 0.62
ITGB1-210ENST00000474568 MORN1Q5T089 497 aa18.93■□□□□ 0.62
ITGB1-210ENST00000474568 AKNAD1Q5T1N1 836 aa18.93■□□□□ 0.62
ITGB1-210ENST00000474568 MFSD6Q6ZSS7 791 aa18.93■□□□□ 0.62
ITGB1-210ENST00000474568 RASGRP2Q7LDG7 609 aa18.93■□□□□ 0.62
ITGB1-210ENST00000474568 NCAPG2Q86XI2 1143 aa18.93■□□□□ 0.62
ITGB1-210ENST00000474568 MB21D1Q8N884 522 aa18.93■□□□□ 0.62
ITGB1-210ENST00000474568 STAG1Q8WVM7 1258 aa18.93■□□□□ 0.62
ITGB1-210ENST00000474568 TRIB2Q92519 343 aa18.93■□□□□ 0.62
ITGB1-210ENST00000474568 SLF1Q9BQI6 1058 aa18.93■□□□□ 0.62
ITGB1-210ENST00000474568 DSCC1Q9BVC3 393 aa18.93■□□□□ 0.62
ITGB1-210ENST00000474568 IVNS1ABPQ9Y6Y0 642 aa18.93■□□□□ 0.62
ITGB1-210ENST00000474568 NEDD4P46934 1319 aa18.93■□□□□ 0.62
ITGB1-210ENST00000474568 FGRP09769 529 aa18.92■□□□□ 0.62
ITGB1-210ENST00000474568 PTPREP23469 700 aa18.92■□□□□ 0.62
ITGB1-210ENST00000474568 RGS2P41220 211 aa18.92■□□□□ 0.62
ITGB1-210ENST00000474568 SLC4A3P48751 1232 aa18.92■□□□□ 0.62
ITGB1-210ENST00000474568 CCL14Q16627 93 aa18.92■□□□□ 0.62
ITGB1-210ENST00000474568 GMCL1P1Q8NEA9 526 aa18.92■□□□□ 0.62
ITGB1-210ENST00000474568 KIFC2Q96AC6 838 aa18.92■□□□□ 0.62
ITGB1-210ENST00000474568 VWA5AO00534 786 aa18.91■□□□□ 0.62
ITGB1-210ENST00000474568 HMGCRP04035 888 aa18.91■□□□□ 0.62
ITGB1-210ENST00000474568 NEFLP07196 543 aa18.91■□□□□ 0.62
ITGB1-210ENST00000474568 BMP3P12645 472 aa18.91■□□□□ 0.62
ITGB1-210ENST00000474568 ZKSCAN1P17029 563 aaPredicted RBP18.91■□□□□ 0.62
ITGB1-210ENST00000474568 MCCP23508 829 aa18.91■□□□□ 0.62
ITGB1-210ENST00000474568 MAP2K5Q13163 448 aa18.91■□□□□ 0.62
ITGB1-210ENST00000474568 RUFY2Q8WXA3 655 aa18.91■□□□□ 0.62
ITGB1-210ENST00000474568 USP6NLQ92738 828 aa18.91■□□□□ 0.62
ITGB1-210ENST00000474568 CCDC136Q96JN2 1154 aa18.91■□□□□ 0.62
ITGB1-210ENST00000474568 DOCK3Q8IZD9 2030 aa18.9■□□□□ 0.62
ITGB1-210ENST00000474568 SLC15A5A6NIM6 579 aa18.9■□□□□ 0.62
ITGB1-210ENST00000474568 TMEM232C9JQI7 657 aa18.9■□□□□ 0.62
ITGB1-210ENST00000474568 IKQ13123 557 aaPredicted RBP18.9■□□□□ 0.62
ITGB1-210ENST00000474568 PPP4R3BQ5MIZ7 849 aa18.9■□□□□ 0.62
ITGB1-210ENST00000474568 APBA2Q99767 749 aa18.9■□□□□ 0.62
ITGB1-210ENST00000474568 ZKSCAN3Q9BRR0 538 aa18.9■□□□□ 0.62
ITGB1-210ENST00000474568 RNF41Q9H4P4 317 aaPredicted RBP18.9■□□□□ 0.62
ITGB1-210ENST00000474568 CTDP1Q9Y5B0 961 aaPredicted RBP18.9■□□□□ 0.62
ITGB1-210ENST00000474568 RAD50Q92878 1312 aa18.9■□□□□ 0.62
ITGB1-210ENST00000474568 SLC1A4P43007 532 aa18.89■□□□□ 0.61
ITGB1-210ENST00000474568 PTH1RQ03431 593 aa18.89■□□□□ 0.61
ITGB1-210ENST00000474568 GRB14Q14449 540 aa18.89■□□□□ 0.61
ITGB1-210ENST00000474568 IMMTQ16891 758 aaKnown RBP18.89■□□□□ 0.61
ITGB1-210ENST00000474568 KCTD1Q719H9 257 aa18.89■□□□□ 0.61
ITGB1-210ENST00000474568 CPXCR1Q8N123 301 aa18.89■□□□□ 0.61
ITGB1-210ENST00000474568 SHCBP1Q8NEM2 672 aa18.89■□□□□ 0.61
ITGB1-210ENST00000474568 REPS2Q8NFH8 660 aa18.89■□□□□ 0.61
ITGB1-210ENST00000474568 SHISA4Q96DD7 197 aa18.89■□□□□ 0.61
ITGB1-210ENST00000474568 DEFB118Q96PH6 123 aa18.89■□□□□ 0.61
ITGB1-210ENST00000474568 CTNNA3Q9UI47 895 aa18.89■□□□□ 0.61
ITGB1-210ENST00000474568 FEM1BQ9UK73 627 aa18.89■□□□□ 0.61
ITGB1-210ENST00000474568 SYNPO2Q9UMS6 1093 aa18.89■□□□□ 0.61
ITGB1-210ENST00000474568 ADAMTS5Q9UNA0 930 aa18.89■□□□□ 0.61
ITGB1-210ENST00000474568 KIAA0100Q14667 2235 aaKnown RBP18.89■□□□□ 0.61
ITGB1-210ENST00000474568 BRCA2P51587 3418 aa18.88■□□□□ 0.61
ITGB1-210ENST00000474568 GJB1P08034 283 aa18.88■□□□□ 0.61
ITGB1-210ENST00000474568 ADORA2AP29274 412 aa18.88■□□□□ 0.61
ITGB1-210ENST00000474568 STAT3P40763 770 aa18.88■□□□□ 0.61
ITGB1-210ENST00000474568 CCDC96Q2M329 555 aa18.88■□□□□ 0.61
ITGB1-210ENST00000474568 PRPF38AQ8NAV1 312 aaKnown RBP18.88■□□□□ 0.61
ITGB1-210ENST00000474568 NPLOC4Q8TAT6 608 aa18.88■□□□□ 0.61
ITGB1-210ENST00000474568 ESR2Q92731 530 aa18.88■□□□□ 0.61
ITGB1-210ENST00000474568 TMEM47Q9BQJ4 181 aa18.88■□□□□ 0.61
ITGB1-210ENST00000474568 RAVER2Q9HCJ3 691 aaKnown RBP18.88■□□□□ 0.61
ITGB1-210ENST00000474568 FLRT1Q9NZU1 646 aa18.88■□□□□ 0.61
ITGB1-210ENST00000474568 ZNF214Q9UL59 606 aaPredicted RBP18.88■□□□□ 0.61
ITGB1-210ENST00000474568 RLFQ13129 1914 aa18.88■□□□□ 0.61
ITGB1-210ENST00000474568 B4E1Z4 1266 aa18.87■□□□□ 0.61
ITGB1-210ENST00000474568 PLXNB2O15031 1838 aa18.87■□□□□ 0.61
ITGB1-210ENST00000474568 SGSM2O43147 1006 aa18.87■□□□□ 0.61
ITGB1-210ENST00000474568 ZBED4O75132 1171 aa18.87■□□□□ 0.61
ITGB1-210ENST00000474568 KDM4AO75164 1064 aa18.87■□□□□ 0.61
ITGB1-210ENST00000474568 PCP11498 1178 aaKnown RBP18.87■□□□□ 0.61
ITGB1-210ENST00000474568 XRCC5P13010 732 aaKnown RBP18.87■□□□□ 0.61
ITGB1-210ENST00000474568 PRKAR2AP13861 404 aaKnown RBP18.87■□□□□ 0.61
ITGB1-210ENST00000474568 SNAP25P60880 206 aa18.87■□□□□ 0.61
ITGB1-210ENST00000474568 SNRNP48Q6IEG0 339 aaKnown RBP18.87■□□□□ 0.61
ITGB1-210ENST00000474568 DPP9Q86TI2 863 aa18.87■□□□□ 0.61
ITGB1-210ENST00000474568 RIOX2Q8IUF8 465 aa18.87■□□□□ 0.61
ITGB1-210ENST00000474568 U2AF1L4Q8WU68 220 aaKnown RBP18.87■□□□□ 0.61
ITGB1-210ENST00000474568 GMCL1Q96IK5 515 aa18.87■□□□□ 0.61
ITGB1-210ENST00000474568 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.87■□□□□ 0.611e-13■■■■□ 20.9
ITGB1-210ENST00000474568 MROH8Q9H579 483 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms