RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 SUCOQ9UBS9 1254 aaKnown RBP5.96□□□□□ -1.46
BRCA1-212ENST00000473961 TJP2Q9UDY2 1190 aa5.96□□□□□ -1.46
BRCA1-212ENST00000473961 LEMD3Q9Y2U8 911 aa5.96□□□□□ -1.46
BRCA1-212ENST00000473961 LTBP3Q9NS15 1303 aa5.96□□□□□ -1.46
BRCA1-212ENST00000473961 FAM86C2PA6NEL3 165 aa5.95□□□□□ -1.46
BRCA1-212ENST00000473961 WDR64B1ANS9 1081 aa5.95□□□□□ -1.46
BRCA1-212ENST00000473961 TM4SF5O14894 197 aa5.95□□□□□ -1.46
BRCA1-212ENST00000473961 DIAPH1O60610 1272 aaKnown RBP5.95□□□□□ -1.46
BRCA1-212ENST00000473961 DNAJA2O60884 412 aa5.95□□□□□ -1.46
BRCA1-212ENST00000473961 RNGTTO60942 597 aaKnown RBP5.95□□□□□ -1.46
BRCA1-212ENST00000473961 ASMTLO95671 621 aa5.95□□□□□ -1.46
BRCA1-212ENST00000473961 RNF4P78317 190 aa5.95□□□□□ -1.46
BRCA1-212ENST00000473961 SOX4Q06945 474 aaPredicted RBP5.95□□□□□ -1.46
BRCA1-212ENST00000473961 SLC10A6Q3KNW5 377 aa5.95□□□□□ -1.46
BRCA1-212ENST00000473961 SV2CQ496J9 727 aa5.95□□□□□ -1.46
BRCA1-212ENST00000473961 HEATR6Q6AI08 1181 aaKnown RBP5.95□□□□□ -1.46
BRCA1-212ENST00000473961 VSIG10LQ86VR7 867 aa5.95□□□□□ -1.46
BRCA1-212ENST00000473961 MFSD2AQ8NA29 543 aa5.95□□□□□ -1.46
BRCA1-212ENST00000473961 ZBTB38Q8NAP3 1195 aaPredicted RBP5.95□□□□□ -1.46
BRCA1-212ENST00000473961 FBXL18Q96ME1 805 aa5.95□□□□□ -1.46
BRCA1-212ENST00000473961 CDC6Q99741 560 aa5.95□□□□□ -1.46
BRCA1-212ENST00000473961 PCDH12Q9NPG4 1184 aa5.95□□□□□ -1.46
BRCA1-212ENST00000473961 PIM2Q9P1W9 311 aa5.95□□□□□ -1.46
BRCA1-212ENST00000473961 PCDHB10Q9UN67 800 aa5.95□□□□□ -1.46
BRCA1-212ENST00000473961 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.95□□□□□ -1.46
BRCA1-212ENST00000473961 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-212ENST00000473961 DLGAP3O95886 979 aa5.94□□□□□ -1.46
BRCA1-212ENST00000473961 APPP05067 770 aa5.94□□□□□ -1.46
BRCA1-212ENST00000473961 BUD31P41223 144 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-212ENST00000473961 ASPAP45381 313 aa5.94□□□□□ -1.46
BRCA1-212ENST00000473961 HSP90AA2PQ14568 343 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-212ENST00000473961 TTLL4Q14679 1199 aa5.94□□□□□ -1.46
BRCA1-212ENST00000473961 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
BRCA1-212ENST00000473961 LILRA6Q6PI73 481 aa5.94□□□□□ -1.46
BRCA1-212ENST00000473961 DYMQ7RTS9 669 aa5.94□□□□□ -1.46
BRCA1-212ENST00000473961 CLEC10AQ8IUN9 316 aa5.94□□□□□ -1.46
BRCA1-212ENST00000473961 TP53INP2Q8IXH6 220 aa5.94□□□□□ -1.46
BRCA1-212ENST00000473961 C12orf50Q8NA57 414 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-212ENST00000473961 GPATCH3Q96I76 525 aa5.94□□□□□ -1.46
BRCA1-212ENST00000473961 KIF2CQ99661 725 aa5.94□□□□□ -1.46
BRCA1-212ENST00000473961 FAM83CQ9BQN1 747 aa5.94□□□□□ -1.46
BRCA1-212ENST00000473961 DISC1Q9NRI5 854 aa5.94□□□□□ -1.46
BRCA1-212ENST00000473961 KCNK4Q9NYG8 393 aa5.94□□□□□ -1.46
BRCA1-212ENST00000473961 PCOLCE2Q9UKZ9 415 aa5.94□□□□□ -1.46
BRCA1-212ENST00000473961 PPP1R9AQ9ULJ8 1098 aa5.94□□□□□ -1.46
BRCA1-212ENST00000473961 TRAV20A0A0B4J274 112 aa5.93□□□□□ -1.46
BRCA1-212ENST00000473961 B8ZZF3 427 aa5.93□□□□□ -1.46
BRCA1-212ENST00000473961 SART1O43290 800 aaKnown RBP5.93□□□□□ -1.46
BRCA1-212ENST00000473961 PPM1BO75688 479 aa5.93□□□□□ -1.46
BRCA1-212ENST00000473961 LRIG2O94898 1065 aa5.93□□□□□ -1.46
BRCA1-212ENST00000473961 CST3P01034 146 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-212ENST00000473961 HCLS1P14317 486 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-212ENST00000473961 POLR2BP30876 1174 aaKnown RBP5.93□□□□□ -1.46
BRCA1-212ENST00000473961 POMZP3Q6PJE2 187 aa5.93□□□□□ -1.46
BRCA1-212ENST00000473961 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.93□□□□□ -1.46
BRCA1-212ENST00000473961 FAM20CQ8IXL6 584 aa5.93□□□□□ -1.46
BRCA1-212ENST00000473961 CCDC144CPQ8IYA2 1237 aa5.93□□□□□ -1.46
BRCA1-212ENST00000473961 SMYD4Q8IYR2 804 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-212ENST00000473961 KLHL6Q8WZ60 621 aa5.93□□□□□ -1.46
BRCA1-212ENST00000473961 PPP1R14AQ96A00 147 aa5.93□□□□□ -1.46
BRCA1-212ENST00000473961 HAUS7Q99871 368 aa5.93□□□□□ -1.46
BRCA1-212ENST00000473961 FOXQ1Q9C009 403 aa5.93□□□□□ -1.46
BRCA1-212ENST00000473961 MKRN2Q9H000 416 aaKnown RBP5.93□□□□□ -1.46
BRCA1-212ENST00000473961 KANSL2Q9H9L4 492 aa5.93□□□□□ -1.46
BRCA1-212ENST00000473961 NOP56O00567 594 aaKnown RBP5.92□□□□□ -1.46
BRCA1-212ENST00000473961 GAS2O43903 313 aaKnown RBP5.92□□□□□ -1.46
BRCA1-212ENST00000473961 ETV3P41162 512 aa5.92□□□□□ -1.46
BRCA1-212ENST00000473961 PRAMEF13Q5VWM6 474 aa5.92□□□□□ -1.46
BRCA1-212ENST00000473961 KIAA1211Q6ZU35 1233 aa5.92□□□□□ -1.46
BRCA1-212ENST00000473961 ADAT2Q7Z6V5 191 aaKnown RBP5.92□□□□□ -1.46
BRCA1-212ENST00000473961 MFSD3Q96ES6 412 aa5.92□□□□□ -1.46
BRCA1-212ENST00000473961 AARSD1Q9BTE6 412 aaKnown RBP5.92□□□□□ -1.46
BRCA1-212ENST00000473961 SUGT1Q9Y2Z0 365 aa5.92□□□□□ -1.46
BRCA1-212ENST00000473961 CARMIL2Q6F5E8 1435 aa5.91□□□□□ -1.46
BRCA1-212ENST00000473961 TIAF1O95411 115 aa5.91□□□□□ -1.46
BRCA1-212ENST00000473961 TP53P04637 393 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-212ENST00000473961 FAM153BP0C7A2 387 aa5.91□□□□□ -1.46
BRCA1-212ENST00000473961 NTF4P34130 210 aa5.91□□□□□ -1.46
BRCA1-212ENST00000473961 USP11P51784 963 aa5.91□□□□□ -1.46
BRCA1-212ENST00000473961 BEND4Q6ZU67 534 aa5.91□□□□□ -1.46
BRCA1-212ENST00000473961 NIM1KQ8IY84 436 aa5.91□□□□□ -1.46
BRCA1-212ENST00000473961 TMEM192Q8IY95 271 aa5.91□□□□□ -1.46
BRCA1-212ENST00000473961 NINJ1Q92982 152 aa5.91□□□□□ -1.46
BRCA1-212ENST00000473961 ISL2Q96A47 359 aa5.91□□□□□ -1.46
BRCA1-212ENST00000473961 DPH2Q9BQC3 489 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-212ENST00000473961 GSX1Q9H4S2 264 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-212ENST00000473961 FBRSQ9HAH7 460 aa5.91□□□□□ -1.46
BRCA1-212ENST00000473961 WHRNQ9P202 907 aa5.91□□□□□ -1.46
BRCA1-212ENST00000473961 PLD2O14939 933 aa5.9□□□□□ -1.46
BRCA1-212ENST00000473961 ADCY3O60266 1144 aa5.9□□□□□ -1.46
BRCA1-212ENST00000473961 RAB11FIP3O75154 756 aa5.9□□□□□ -1.46
BRCA1-212ENST00000473961 RFPL3O75679 317 aa5.9□□□□□ -1.46
BRCA1-212ENST00000473961 FARP2O94887 1054 aaPredicted RBP5.9□□□□□ -1.46
BRCA1-212ENST00000473961 UBOX5O94941 541 aa5.9□□□□□ -1.46
BRCA1-212ENST00000473961 ITGA4P13612 1032 aa5.9□□□□□ -1.46
BRCA1-212ENST00000473961 CYP7A1P22680 504 aa5.9□□□□□ -1.46
BRCA1-212ENST00000473961 CNGA1P29973 690 aa5.9□□□□□ -1.46
BRCA1-212ENST00000473961 SOX5P35711 763 aa5.9□□□□□ -1.46
BRCA1-212ENST00000473961 MASP1P48740 699 aa5.9□□□□□ -1.46
BRCA1-212ENST00000473961 SUMO1P63165 101 aaKnown RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms