RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 WDR63Q8IWG1 891 aa12.96□□□□□ -0.33
SSBP1-209ENST00000473783 KLHDC9Q8NEP7 349 aa12.96□□□□□ -0.33
SSBP1-209ENST00000473783 TGFBRAP1Q8WUH2 860 aa12.96□□□□□ -0.33
SSBP1-209ENST00000473783 FBXL18Q96ME1 805 aa12.96□□□□□ -0.33
SSBP1-209ENST00000473783 UIMC1Q96RL1 719 aa12.96□□□□□ -0.33
SSBP1-209ENST00000473783 TINF2Q9BSI4 451 aa12.96□□□□□ -0.33
SSBP1-209ENST00000473783 CD320Q9NPF0 282 aa12.96□□□□□ -0.33
SSBP1-209ENST00000473783 HMG20BQ9P0W2 317 aa12.96□□□□□ -0.33
SSBP1-209ENST00000473783 PARP14Q460N5 1801 aa12.96□□□□□ -0.33
SSBP1-209ENST00000473783 ZNF865P0CJ78 1059 aaPredicted RBP12.95□□□□□ -0.34
SSBP1-209ENST00000473783 ALADP13716 330 aa12.95□□□□□ -0.34
SSBP1-209ENST00000473783 CST5P28325 142 aaPredicted RBP12.95□□□□□ -0.34
SSBP1-209ENST00000473783 FOXK2Q01167 660 aa12.95□□□□□ -0.34
SSBP1-209ENST00000473783 RAB3GAP1Q15042 981 aa12.95□□□□□ -0.34
SSBP1-209ENST00000473783 KCNA10Q16322 511 aa12.95□□□□□ -0.34
SSBP1-209ENST00000473783 CSPP1Q1MSJ5 1256 aa12.95□□□□□ -0.34
SSBP1-209ENST00000473783 TATDN1Q6P1N9 297 aa12.95□□□□□ -0.34
SSBP1-209ENST00000473783 OTOP2Q7RTS6 562 aa12.95□□□□□ -0.34
SSBP1-209ENST00000473783 NCAPG2Q86XI2 1143 aa12.95□□□□□ -0.34
SSBP1-209ENST00000473783 FAM126BQ8IXS8 530 aa12.95□□□□□ -0.34
SSBP1-209ENST00000473783 SPATA5Q8NB90 893 aa12.95□□□□□ -0.34
SSBP1-209ENST00000473783 ACER1Q8TDN7 264 aa12.95□□□□□ -0.34
SSBP1-209ENST00000473783 LENG1Q96BZ8 264 aaPredicted RBP12.95□□□□□ -0.34
SSBP1-209ENST00000473783 SLC4A7Q9Y6M7 1214 aa12.95□□□□□ -0.34
SSBP1-209ENST00000473783 COL11A1P12107 1806 aaPredicted RBP12.95□□□□□ -0.34
SSBP1-209ENST00000473783 A0A0U1RQG5 324 aaPredicted RBP12.94□□□□□ -0.34
SSBP1-209ENST00000473783 A0A1B0GUL7 405 aa12.94□□□□□ -0.34
SSBP1-209ENST00000473783 ARVCFO00192 962 aa12.94□□□□□ -0.34
SSBP1-209ENST00000473783 MYOGP15173 224 aa12.94□□□□□ -0.34
SSBP1-209ENST00000473783 TAL1P17542 331 aaPredicted RBP12.94□□□□□ -0.34
SSBP1-209ENST00000473783 CYP2C18P33260 490 aa12.94□□□□□ -0.34
SSBP1-209ENST00000473783 PPP4CP60510 307 aa12.94□□□□□ -0.34
SSBP1-209ENST00000473783 TIMM10P62072 90 aa12.94□□□□□ -0.34
SSBP1-209ENST00000473783 TBC1D9Q6ZT07 1266 aa12.94□□□□□ -0.34
SSBP1-209ENST00000473783 XAGE2Q96GT9 111 aa12.94□□□□□ -0.34
SSBP1-209ENST00000473783 PRKRIP1Q9H875 184 aaPredicted RBP12.94□□□□□ -0.34
SSBP1-209ENST00000473783 AATFQ9NY61 560 aaKnown RBP eCLIP12.94□□□□□ -0.34
SSBP1-209ENST00000473783 CNPY2Q9Y2B0 182 aa12.94□□□□□ -0.34
SSBP1-209ENST00000473783 DIS3Q9Y2L1 958 aaKnown RBP12.94□□□□□ -0.34
SSBP1-209ENST00000473783 ATP2A2P16615 1042 aaKnown RBP12.93□□□□□ -0.34
SSBP1-209ENST00000473783 PLS1Q14651 629 aa12.93□□□□□ -0.34
SSBP1-209ENST00000473783 PI16Q6UXB8 463 aa12.93□□□□□ -0.34
SSBP1-209ENST00000473783 GJD3Q8N144 294 aa12.93□□□□□ -0.34
SSBP1-209ENST00000473783 PCSK9Q8NBP7 692 aaKnown RBP12.93□□□□□ -0.34
SSBP1-209ENST00000473783 TANGO6Q9C0B7 1094 aa12.93□□□□□ -0.34
SSBP1-209ENST00000473783 LRP2BPQ9P2M1 347 aa12.93□□□□□ -0.34
SSBP1-209ENST00000473783 AKAP2Q9Y2D5 859 aa12.93□□□□□ -0.34
SSBP1-209ENST00000473783 COL4A4P53420 1690 aaPredicted RBP12.93□□□□□ -0.34
SSBP1-209ENST00000473783 PTPRCP08575 1304 aa12.92□□□□□ -0.34
SSBP1-209ENST00000473783 RFXAPO00287 272 aa12.92□□□□□ -0.34
SSBP1-209ENST00000473783 ST18O60284 1047 aa12.92□□□□□ -0.34
SSBP1-209ENST00000473783 DUSP11O75319 330 aaKnown RBP12.92□□□□□ -0.34
SSBP1-209ENST00000473783 SLC25A27O95847 323 aa12.92□□□□□ -0.34
SSBP1-209ENST00000473783 CD4P01730 458 aa12.92□□□□□ -0.34
SSBP1-209ENST00000473783 ABCB5Q2M3G0 1257 aa12.92□□□□□ -0.34
SSBP1-209ENST00000473783 TMEM67Q5HYA8 995 aa12.92□□□□□ -0.34
SSBP1-209ENST00000473783 NAA16Q6N069 864 aaPredicted RBP12.92□□□□□ -0.34
SSBP1-209ENST00000473783 FAM178BQ8IXR5 827 aa12.92□□□□□ -0.34
SSBP1-209ENST00000473783 EHD4Q9H223 541 aa12.92□□□□□ -0.34
SSBP1-209ENST00000473783 HIPK3Q9H422 1215 aa12.92□□□□□ -0.34
SSBP1-209ENST00000473783 CABP5Q9NP86 173 aa12.92□□□□□ -0.34
SSBP1-209ENST00000473783 COPRSQ9NQ92 184 aa12.92□□□□□ -0.34
SSBP1-209ENST00000473783 SAP30BPQ9UHR5 308 aaKnown RBP12.92□□□□□ -0.34
SSBP1-209ENST00000473783 FAM184BQ9ULE4 1060 aa12.92□□□□□ -0.34
SSBP1-209ENST00000473783 MCM3APO60318 1980 aa12.92□□□□□ -0.34
SSBP1-209ENST00000473783 CFAP54Q96N23 3096 aa12.92□□□□□ -0.34
SSBP1-209ENST00000473783 MYO5AQ9Y4I1 1855 aaKnown RBP12.91□□□□□ -0.34
SSBP1-209ENST00000473783 ASGR1P07306 291 aa12.91□□□□□ -0.34
SSBP1-209ENST00000473783 CA3P07451 260 aa12.91□□□□□ -0.34
SSBP1-209ENST00000473783 ARID4AP29374 1257 aaPredicted RBP12.91□□□□□ -0.34
SSBP1-209ENST00000473783 DDX10Q13206 875 aaKnown RBP12.91□□□□□ -0.34
SSBP1-209ENST00000473783 KCTD2Q14681 263 aa12.91□□□□□ -0.34
SSBP1-209ENST00000473783 ZNF792Q3KQV3 632 aa12.91□□□□□ -0.34
SSBP1-209ENST00000473783 CERKLQ49MI3 558 aaPredicted RBP12.91□□□□□ -0.34
SSBP1-209ENST00000473783 KRT40Q6A162 431 aa12.91□□□□□ -0.34
SSBP1-209ENST00000473783 RPUSD2Q8IZ73 545 aaKnown RBP12.91□□□□□ -0.34
SSBP1-209ENST00000473783 MSL3Q8N5Y2 521 aaKnown RBP12.91□□□□□ -0.34
SSBP1-209ENST00000473783 VTI1AQ96AJ9 217 aa12.91□□□□□ -0.34
SSBP1-209ENST00000473783 MMP19Q99542 508 aa12.91□□□□□ -0.34
SSBP1-209ENST00000473783 SPC25Q9HBM1 224 aa12.91□□□□□ -0.34
SSBP1-209ENST00000473783 SERPINB13Q9UIV8 391 aa12.91□□□□□ -0.34
SSBP1-209ENST00000473783 PA2G4Q9UQ80 394 aaKnown RBP12.91□□□□□ -0.34
SSBP1-209ENST00000473783 CACNA1HO95180 2353 aa12.91□□□□□ -0.34
SSBP1-209ENST00000473783 MYADML2A6NDP7 307 aa12.9□□□□□ -0.34
SSBP1-209ENST00000473783 EPOPA6NHQ4 379 aa12.9□□□□□ -0.34
SSBP1-209ENST00000473783 ZBBXA8MT70 800 aa12.9□□□□□ -0.34
SSBP1-209ENST00000473783 PGK2P07205 417 aa12.9□□□□□ -0.34
SSBP1-209ENST00000473783 C6orf222P0C671 652 aaPredicted RBP12.9□□□□□ -0.34
SSBP1-209ENST00000473783 DSG3P32926 999 aa12.9□□□□□ -0.34
SSBP1-209ENST00000473783 CDCA7LQ96GN5 454 aa12.9□□□□□ -0.34
SSBP1-209ENST00000473783 PTPRZ1P23471 2315 aaPredicted RBP12.9□□□□□ -0.34
SSBP1-209ENST00000473783 IGSF3O75054 1194 aa12.89□□□□□ -0.35
SSBP1-209ENST00000473783 FLOT1O75955 427 aa12.89□□□□□ -0.35
SSBP1-209ENST00000473783 UBTFL1P0CB47 393 aaPredicted RBP12.89□□□□□ -0.35
SSBP1-209ENST00000473783 SSTR3P32745 418 aaPredicted RBP12.89□□□□□ -0.35
SSBP1-209ENST00000473783 ARNTL2Q8WYA1 636 aa12.89□□□□□ -0.35
SSBP1-209ENST00000473783 ATG4CQ96DT6 458 aa12.89□□□□□ -0.35
SSBP1-209ENST00000473783 UPF3AQ9H1J1 476 aaKnown RBP12.89□□□□□ -0.35
SSBP1-209ENST00000473783 CERS4Q9HA82 394 aa12.89□□□□□ -0.35
SSBP1-209ENST00000473783 USP34Q70CQ2 3546 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms