RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 ZKSCAN1P17029 563 aaPredicted RBP13.66□□□□□ -0.22
CPNE1-222ENST00000473373 LRRC47Q8N1G4 583 aaKnown RBP13.66□□□□□ -0.22
CPNE1-222ENST00000473373 MB21D1Q8N884 522 aa13.66□□□□□ -0.22
CPNE1-222ENST00000473373 CHMP4CQ96CF2 233 aa13.66□□□□□ -0.22
CPNE1-222ENST00000473373 ATG4CQ96DT6 458 aa13.66□□□□□ -0.22
CPNE1-222ENST00000473373 CEP95Q96GE4 821 aa13.66□□□□□ -0.22
CPNE1-222ENST00000473373 OSBPL3Q9H4L5 887 aa13.66□□□□□ -0.22
CPNE1-222ENST00000473373 NYAP2Q9P242 653 aa13.66□□□□□ -0.22
CPNE1-222ENST00000473373 STX8Q9UNK0 236 aa13.66□□□□□ -0.22
CPNE1-222ENST00000473373 TFRCP02786 760 aaKnown RBP13.65□□□□□ -0.22
CPNE1-222ENST00000473373 DSG3P32926 999 aa13.65□□□□□ -0.22
CPNE1-222ENST00000473373 HAND2P61296 217 aa13.65□□□□□ -0.22
CPNE1-222ENST00000473373 KIAA1755Q5JYT7 1200 aa13.65□□□□□ -0.22
CPNE1-222ENST00000473373 DPP9Q86TI2 863 aa13.65□□□□□ -0.22
CPNE1-222ENST00000473373 TICAM2Q86XR7 235 aa13.65□□□□□ -0.22
CPNE1-222ENST00000473373 TRMT44Q8IYL2 757 aaKnown RBP13.65□□□□□ -0.22
CPNE1-222ENST00000473373 SPATC1LQ9H0A9 340 aa13.65□□□□□ -0.22
CPNE1-222ENST00000473373 UNC93B1Q9H1C4 597 aa13.65□□□□□ -0.22
CPNE1-222ENST00000473373 HMX1Q9NP08 348 aaPredicted RBP13.65□□□□□ -0.22
CPNE1-222ENST00000473373 BTBD7Q9P203 1132 aa13.65□□□□□ -0.22
CPNE1-222ENST00000473373 MYH6P13533 1939 aa13.64□□□□□ -0.23
CPNE1-222ENST00000473373 F5H6K3 240 aa13.64□□□□□ -0.23
CPNE1-222ENST00000473373 HSPD1P10809 573 aaKnown RBP13.64□□□□□ -0.23
CPNE1-222ENST00000473373 KLRC3Q07444 240 aa13.64□□□□□ -0.23
CPNE1-222ENST00000473373 LBX2Q6XYB7 198 aa13.64□□□□□ -0.23
CPNE1-222ENST00000473373 ZNF589Q86UQ0 364 aaPredicted RBP13.64□□□□□ -0.23
CPNE1-222ENST00000473373 DEFB118Q96PH6 123 aa13.64□□□□□ -0.23
CPNE1-222ENST00000473373 NUP88Q99567 741 aaPredicted RBP13.64□□□□□ -0.23
CPNE1-222ENST00000473373 APBA2Q99767 749 aa13.64□□□□□ -0.23
CPNE1-222ENST00000473373 SLF1Q9BQI6 1058 aa13.64□□□□□ -0.23
CPNE1-222ENST00000473373 SLC5A4Q9NY91 659 aa13.64□□□□□ -0.23
CPNE1-222ENST00000473373 FRMPD3Q5JV73 1810 aa13.63□□□□□ -0.23
CPNE1-222ENST00000473373 SLC15A5A6NIM6 579 aa13.63□□□□□ -0.23
CPNE1-222ENST00000473373 CNMDO75829 334 aa13.63□□□□□ -0.23
CPNE1-222ENST00000473373 NDUFB10O96000 172 aa13.63□□□□□ -0.23
CPNE1-222ENST00000473373 FGAP02671 866 aa13.63□□□□□ -0.23
CPNE1-222ENST00000473373 NEFLP07196 543 aa13.63□□□□□ -0.23
CPNE1-222ENST00000473373 GJB1P08034 283 aa13.63□□□□□ -0.23
CPNE1-222ENST00000473373 GJA8P48165 433 aa13.63□□□□□ -0.23
CPNE1-222ENST00000473373 MAP2K5Q13163 448 aa13.63□□□□□ -0.23
CPNE1-222ENST00000473373 TTC22Q5TAA0 569 aa13.63□□□□□ -0.23
CPNE1-222ENST00000473373 MFSD14CQ5VZR4 134 aa13.63□□□□□ -0.23
CPNE1-222ENST00000473373 MFSD6Q6ZSS7 791 aa13.63□□□□□ -0.23
CPNE1-222ENST00000473373 SIAH1Q8IUQ4 282 aa13.63□□□□□ -0.23
CPNE1-222ENST00000473373 NEDD1Q8NHV4 660 aa13.63□□□□□ -0.23
CPNE1-222ENST00000473373 U2AF1L4Q8WU68 220 aaKnown RBP13.63□□□□□ -0.23
CPNE1-222ENST00000473373 RUFY2Q8WXA3 655 aa13.63□□□□□ -0.23
CPNE1-222ENST00000473373 KIFC2Q96AC6 838 aa13.63□□□□□ -0.23
CPNE1-222ENST00000473373 HTATIP2Q9BUP3 242 aa13.63□□□□□ -0.23
CPNE1-222ENST00000473373 MOV10L1Q9BXT6 1211 aaKnown RBP13.63□□□□□ -0.23
CPNE1-222ENST00000473373 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.63□□□□□ -0.23
CPNE1-222ENST00000473373 FBXO28Q9NVF7 368 aa13.63□□□□□ -0.23
CPNE1-222ENST00000473373 MTMR4Q9NYA4 1195 aa13.63□□□□□ -0.23
CPNE1-222ENST00000473373 GJD2Q9UKL4 321 aa13.63□□□□□ -0.23
CPNE1-222ENST00000473373 ZNF213O14771 459 aa13.62□□□□□ -0.23
CPNE1-222ENST00000473373 ZBED4O75132 1171 aa13.62□□□□□ -0.23
CPNE1-222ENST00000473373 PRKAR2AP13861 404 aaKnown RBP13.62□□□□□ -0.23
CPNE1-222ENST00000473373 ERCC3P19447 782 aa13.62□□□□□ -0.23
CPNE1-222ENST00000473373 PTPREP23469 700 aa13.62□□□□□ -0.23
CPNE1-222ENST00000473373 CNGA1P29973 690 aa13.62□□□□□ -0.23
CPNE1-222ENST00000473373 ALX1Q15699 326 aa13.62□□□□□ -0.23
CPNE1-222ENST00000473373 CCDC96Q2M329 555 aa13.62□□□□□ -0.23
CPNE1-222ENST00000473373 SLFN13Q68D06 897 aa13.62□□□□□ -0.23
CPNE1-222ENST00000473373 UBE2Q1Q7Z7E8 422 aa13.62□□□□□ -0.23
CPNE1-222ENST00000473373 CPXCR1Q8N123 301 aa13.62□□□□□ -0.23
CPNE1-222ENST00000473373 TRIB2Q92519 343 aa13.62□□□□□ -0.23
CPNE1-222ENST00000473373 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.62□□□□□ -0.23
CPNE1-222ENST00000473373 RNF41Q9H4P4 317 aaPredicted RBP13.62□□□□□ -0.23
CPNE1-222ENST00000473373 INCENPQ9NQS7 918 aa13.62□□□□□ -0.23
CPNE1-222ENST00000473373 PPP1R9AQ9ULJ8 1098 aa13.62□□□□□ -0.23
CPNE1-222ENST00000473373 RPTORQ8N122 1335 aa13.62□□□□□ -0.23
CPNE1-222ENST00000473373 PLIN4Q96Q06 1357 aa13.61□□□□□ -0.23
CPNE1-222ENST00000473373 STRNO43815 780 aa13.61□□□□□ -0.23
CPNE1-222ENST00000473373 FARP2O94887 1054 aaPredicted RBP13.61□□□□□ -0.23
CPNE1-222ENST00000473373 SLC25A27O95847 323 aa13.61□□□□□ -0.23
CPNE1-222ENST00000473373 FCER1AP12319 257 aa13.61□□□□□ -0.23
CPNE1-222ENST00000473373 BMP3P12645 472 aa13.61□□□□□ -0.23
CPNE1-222ENST00000473373 XRCC5P13010 732 aaKnown RBP13.61□□□□□ -0.23
CPNE1-222ENST00000473373 SLC1A4P43007 532 aa13.61□□□□□ -0.23
CPNE1-222ENST00000473373 MMP19Q99542 508 aa13.61□□□□□ -0.23
CPNE1-222ENST00000473373 MROH8Q9H579 483 aa13.61□□□□□ -0.23
CPNE1-222ENST00000473373 ANAPC4Q9UJX5 808 aa13.61□□□□□ -0.23
CPNE1-222ENST00000473373 FEM1BQ9UK73 627 aa13.61□□□□□ -0.23
CPNE1-222ENST00000473373 ZNF236Q9UL36 1845 aa13.61□□□□□ -0.23
CPNE1-222ENST00000473373 TRIOBPQ9H2D6 2365 aa13.6□□□□□ -0.23
CPNE1-222ENST00000473373 VWA5AO00534 786 aa13.6□□□□□ -0.23
CPNE1-222ENST00000473373 CEP290O15078 2479 aa13.6□□□□□ -0.23
CPNE1-222ENST00000473373 SGPL1O95470 568 aa13.6□□□□□ -0.23
CPNE1-222ENST00000473373 PDE4AP27815 886 aa13.6□□□□□ -0.23
CPNE1-222ENST00000473373 ADORA2AP29274 412 aa13.6□□□□□ -0.23
CPNE1-222ENST00000473373 COPB2P35606 906 aa13.6□□□□□ -0.23
CPNE1-222ENST00000473373 STAT3P40763 770 aa13.6□□□□□ -0.23
CPNE1-222ENST00000473373 STAT2P52630 851 aa13.6□□□□□ -0.23
CPNE1-222ENST00000473373 TRIM32Q13049 653 aa13.6□□□□□ -0.23
CPNE1-222ENST00000473373 KCTD2Q14681 263 aa13.6□□□□□ -0.23
CPNE1-222ENST00000473373 CCL14Q16627 93 aa13.6□□□□□ -0.23
CPNE1-222ENST00000473373 IMMTQ16891 758 aaKnown RBP13.6□□□□□ -0.23
CPNE1-222ENST00000473373 MORN1Q5T089 497 aa13.6□□□□□ -0.23
CPNE1-222ENST00000473373 AKNAD1Q5T1N1 836 aa13.6□□□□□ -0.23
CPNE1-222ENST00000473373 PRPF38AQ8NAV1 312 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms