RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 SH2D4AQ9H788 454 aa19.93■□□□□ 0.78
USP40-212ENST00000473191 ADAMTS5Q9UNA0 930 aa19.93■□□□□ 0.78
USP40-212ENST00000473191 IVNS1ABPQ9Y6Y0 642 aa19.93■□□□□ 0.78
USP40-212ENST00000473191 EVI5O60447 810 aa19.92■□□□□ 0.78
USP40-212ENST00000473191 IGHDP01880 384 aa19.92■□□□□ 0.78
USP40-212ENST00000473191 GNAT2P19087 354 aa19.92■□□□□ 0.78
USP40-212ENST00000473191 PDE1AP54750 535 aa19.92■□□□□ 0.78
USP40-212ENST00000473191 FAM47AQ5JRC9 791 aa19.92■□□□□ 0.78
USP40-212ENST00000473191 ANKLE1Q8NAG6 615 aa19.92■□□□□ 0.78
USP40-212ENST00000473191 REPS2Q8NFH8 660 aa19.92■□□□□ 0.78
USP40-212ENST00000473191 ZNF236Q9UL36 1845 aa19.92■□□□□ 0.78
USP40-212ENST00000473191 F5H6K3 240 aa19.91■□□□□ 0.78
USP40-212ENST00000473191 NDUFB10O96000 172 aa19.91■□□□□ 0.78
USP40-212ENST00000473191 KLRC3Q07444 240 aa19.91■□□□□ 0.78
USP40-212ENST00000473191 DPP9Q86TI2 863 aa19.91■□□□□ 0.78
USP40-212ENST00000473191 SHCBP1Q8NEM2 672 aa19.91■□□□□ 0.78
USP40-212ENST00000473191 EXOC6Q8TAG9 804 aa19.91■□□□□ 0.78
USP40-212ENST00000473191 CEP95Q96GE4 821 aa19.91■□□□□ 0.78
USP40-212ENST00000473191 LNPKQ9C0E8 428 aa19.91■□□□□ 0.78
USP40-212ENST00000473191 PRO3102Q9H379 93 aa19.91■□□□□ 0.78
USP40-212ENST00000473191 C11orf49Q9H6J7 331 aa19.91■□□□□ 0.78
USP40-212ENST00000473191 GOPCQ9HD26 462 aa19.91■□□□□ 0.78
USP40-212ENST00000473191 NYAP2Q9P242 653 aa19.91■□□□□ 0.78
USP40-212ENST00000473191 CLIP2Q9UDT6 1046 aa19.91■□□□□ 0.78
USP40-212ENST00000473191 STAP2Q9UGK3 403 aa19.91■□□□□ 0.78
USP40-212ENST00000473191 PPP1R9AQ9ULJ8 1098 aa19.91■□□□□ 0.78
USP40-212ENST00000473191 MYH4Q9Y623 1939 aa19.91■□□□□ 0.78
USP40-212ENST00000473191 VWA5AO00534 786 aa19.9■□□□□ 0.78
USP40-212ENST00000473191 PPARAQ07869 468 aa19.9■□□□□ 0.78
USP40-212ENST00000473191 PRAMEF19Q5SWL8 479 aa19.9■□□□□ 0.78
USP40-212ENST00000473191 MFSD14CQ5VZR4 134 aa19.9■□□□□ 0.78
USP40-212ENST00000473191 ANO1Q5XXA6 986 aa19.9■□□□□ 0.78
USP40-212ENST00000473191 B4GALNT3Q6L9W6 998 aa19.9■□□□□ 0.78
USP40-212ENST00000473191 C7orf61Q8IZ16 206 aa19.9■□□□□ 0.78
USP40-212ENST00000473191 LRRC47Q8N1G4 583 aaKnown RBP19.9■□□□□ 0.78
USP40-212ENST00000473191 MB21D1Q8N884 522 aa19.9■□□□□ 0.78
USP40-212ENST00000473191 CHMP4CQ96CF2 233 aa19.9■□□□□ 0.78
USP40-212ENST00000473191 NBPF3Q9H094 633 aa19.9■□□□□ 0.78
USP40-212ENST00000473191 ZNF214Q9UL59 606 aaPredicted RBP19.9■□□□□ 0.78
USP40-212ENST00000473191 CTDSPL2Q05D32 466 aa19.89■□□□□ 0.77
USP40-212ENST00000473191 ZNF444Q8N0Y2 327 aaPredicted RBP19.89■□□□□ 0.77
USP40-212ENST00000473191 FAM227BQ96M60 508 aa19.89■□□□□ 0.77
USP40-212ENST00000473191 NAPBQ9H115 298 aa19.89■□□□□ 0.77
USP40-212ENST00000473191 ZMYND8Q9ULU4 1186 aaPredicted RBP19.89■□□□□ 0.77
USP40-212ENST00000473191 ZNFX1Q9P2E3 1918 aaKnown RBP19.88■□□□□ 0.77
USP40-212ENST00000473191 A0A0D9SFI3 127 aa19.88■□□□□ 0.77
USP40-212ENST00000473191 PGK2P07205 417 aa19.88■□□□□ 0.77
USP40-212ENST00000473191 COL6A1P12109 1028 aa19.88■□□□□ 0.77
USP40-212ENST00000473191 CYBAP13498 195 aa19.88■□□□□ 0.77
USP40-212ENST00000473191 CNGA1P29973 690 aa19.88■□□□□ 0.77
USP40-212ENST00000473191 MROH8Q9H579 483 aa19.88■□□□□ 0.77
USP40-212ENST00000473191 MTMR4Q9NYA4 1195 aa19.88■□□□□ 0.77
USP40-212ENST00000473191 DDX20Q9UHI6 824 aaKnown RBP19.88■□□□□ 0.77
USP40-212ENST00000473191 RIPK3Q9Y572 518 aa19.88■□□□□ 0.77
USP40-212ENST00000473191 NR2E3Q9Y5X4 410 aa19.88■□□□□ 0.77
USP40-212ENST00000473191 RANBP2P49792 3224 aaKnown RBP19.87■□□□□ 0.77
USP40-212ENST00000473191 STRNO43815 780 aa19.87■□□□□ 0.77
USP40-212ENST00000473191 SYN1P17600 705 aa19.87■□□□□ 0.77
USP40-212ENST00000473191 CAPN2P17655 700 aa19.87■□□□□ 0.77
USP40-212ENST00000473191 LRRFIP1Q32MZ4 808 aaKnown RBP19.87■□□□□ 0.77
USP40-212ENST00000473191 RASGRP2Q7LDG7 609 aa19.87■□□□□ 0.77
USP40-212ENST00000473191 RIOX2Q8IUF8 465 aa19.87■□□□□ 0.77
USP40-212ENST00000473191 EVI5LQ96CN4 794 aa19.87■□□□□ 0.77
USP40-212ENST00000473191 NMT2O60551 498 aa19.86■□□□□ 0.77
USP40-212ENST00000473191 STAT3P40763 770 aa19.86■□□□□ 0.77
USP40-212ENST00000473191 TFAP4Q01664 338 aa19.86■□□□□ 0.77
USP40-212ENST00000473191 LRRC26Q2I0M4 334 aa19.86■□□□□ 0.77
USP40-212ENST00000473191 OLFML2BQ68BL8 750 aa19.86■□□□□ 0.77
USP40-212ENST00000473191 ZNF589Q86UQ0 364 aaPredicted RBP19.86■□□□□ 0.77
USP40-212ENST00000473191 SMC5Q8IY18 1101 aa19.86■□□□□ 0.77
USP40-212ENST00000473191 NEDD1Q8NHV4 660 aa19.86■□□□□ 0.77
USP40-212ENST00000473191 MKL1Q969V6 931 aa19.86■□□□□ 0.77
USP40-212ENST00000473191 MAML3Q96JK9 1138 aa19.86■□□□□ 0.77
USP40-212ENST00000473191 SLF1Q9BQI6 1058 aa19.86■□□□□ 0.77
USP40-212ENST00000473191 NACAP1Q9BZK3 213 aa19.86■□□□□ 0.77
USP40-212ENST00000473191 ZBTB47Q9UFB7 747 aaPredicted RBP19.86■□□□□ 0.77
USP40-212ENST00000473191 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.86■□□□□ 0.77
USP40-212ENST00000473191 SZT2Q5T011 3432 aa19.86■□□□□ 0.77
USP40-212ENST00000473191 PLIN4Q96Q06 1357 aa19.85■□□□□ 0.77
USP40-212ENST00000473191 TSPY3P0CV98 308 aa19.85■□□□□ 0.77
USP40-212ENST00000473191 TSPY8P0CW00 308 aa19.85■□□□□ 0.77
USP40-212ENST00000473191 MMP19Q99542 508 aa19.85■□□□□ 0.77
USP40-212ENST00000473191 IL17RBQ9NRM6 502 aa19.85■□□□□ 0.77
USP40-212ENST00000473191 SLC25A27O95847 323 aa19.84■□□□□ 0.77
USP40-212ENST00000473191 TTLL1O95922 423 aa19.84■□□□□ 0.77
USP40-212ENST00000473191 FCER1AP12319 257 aa19.84■□□□□ 0.77
USP40-212ENST00000473191 SLC4A3P48751 1232 aa19.84■□□□□ 0.77
USP40-212ENST00000473191 PDE4BQ07343 736 aa19.84■□□□□ 0.77
USP40-212ENST00000473191 ABRAQ8N0Z2 381 aa19.84■□□□□ 0.77
USP40-212ENST00000473191 KIFC2Q96AC6 838 aa19.84■□□□□ 0.77
USP40-212ENST00000473191 PLXNA1Q9UIW2 1896 aa19.84■□□□□ 0.77
USP40-212ENST00000473191 CEP290O15078 2479 aa19.83■□□□□ 0.77
USP40-212ENST00000473191 TAL1P17542 331 aaPredicted RBP19.83■□□□□ 0.77
USP40-212ENST00000473191 NMIQ13287 307 aaPredicted RBP19.83■□□□□ 0.77
USP40-212ENST00000473191 ZNF792Q3KQV3 632 aa19.83■□□□□ 0.77
USP40-212ENST00000473191 GJC2Q5T442 439 aaPredicted RBP19.83■□□□□ 0.77
USP40-212ENST00000473191 CPXCR1Q8N123 301 aa19.83■□□□□ 0.77
USP40-212ENST00000473191 RAVER2Q9HCJ3 691 aaKnown RBP19.83■□□□□ 0.77
USP40-212ENST00000473191 SLFN13Q68D06 897 aa19.82■□□□□ 0.76
USP40-212ENST00000473191 SNRNP48Q6IEG0 339 aaKnown RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms