RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 CRNKL1Q9BZJ0 848 aaKnown RBP23.98■■□□□ 1.43
CCDC78-208ENST00000471861 VCPKMTQ9H867 229 aa23.98■■□□□ 1.43
CCDC78-208ENST00000471861 TMX2Q9Y320 296 aa23.98■■□□□ 1.43
CCDC78-208ENST00000471861 ZNFX1Q9P2E3 1918 aaKnown RBP23.98■■□□□ 1.43
CCDC78-208ENST00000471861 TCRBV5S4A2TA0A5A2 114 aa23.97■■□□□ 1.43
CCDC78-208ENST00000471861 PQBP1O60828 265 aaKnown RBP23.97■■□□□ 1.43
CCDC78-208ENST00000471861 ICA1Q05084 483 aa23.97■■□□□ 1.43
CCDC78-208ENST00000471861 FBXO28Q9NVF7 368 aa23.97■■□□□ 1.43
CCDC78-208ENST00000471861 EXOC6BQ9Y2D4 811 aa23.97■■□□□ 1.43
CCDC78-208ENST00000471861 PLXNA1Q9UIW2 1896 aa23.96■■□□□ 1.43
CCDC78-208ENST00000471861 ZNF532Q9HCE3 1301 aa23.96■■□□□ 1.43
CCDC78-208ENST00000471861 ADAMTS4O75173 837 aa23.96■■□□□ 1.43
CCDC78-208ENST00000471861 ZNF865P0CJ78 1059 aaPredicted RBP23.96■■□□□ 1.43
CCDC78-208ENST00000471861 RLBP1P12271 317 aa23.96■■□□□ 1.43
CCDC78-208ENST00000471861 RAG1P15918 1043 aa23.96■■□□□ 1.43
CCDC78-208ENST00000471861 DNAJB2P25686 324 aa23.96■■□□□ 1.43
CCDC78-208ENST00000471861 FPGSQ05932 587 aa23.96■■□□□ 1.43
CCDC78-208ENST00000471861 ZNF792Q3KQV3 632 aa23.96■■□□□ 1.43
CCDC78-208ENST00000471861 SLC9C2Q5TAH2 1124 aa23.96■■□□□ 1.43
CCDC78-208ENST00000471861 SAMD1Q6SPF0 538 aaPredicted RBP23.96■■□□□ 1.43
CCDC78-208ENST00000471861 MMP19Q99542 508 aa23.96■■□□□ 1.43
CCDC78-208ENST00000471861 TINF2Q9BSI4 451 aa23.96■■□□□ 1.43
CCDC78-208ENST00000471861 ADAMTS5Q9UNA0 930 aa23.96■■□□□ 1.43
CCDC78-208ENST00000471861 MYH8P13535 1937 aa23.95■■□□□ 1.42
CCDC78-208ENST00000471861 WDR46O15213 610 aaKnown RBP23.95■■□□□ 1.42
CCDC78-208ENST00000471861 FAAP100Q0VG06 881 aa23.95■■□□□ 1.42
CCDC78-208ENST00000471861 CEP85Q6P2H3 762 aa23.95■■□□□ 1.42
CCDC78-208ENST00000471861 RNF180Q86T96 592 aa23.95■■□□□ 1.42
CCDC78-208ENST00000471861 SYMPKQ92797 1274 aaKnown RBP23.95■■□□□ 1.42
CCDC78-208ENST00000471861 ARHGEF10LQ9HCE6 1279 aa23.95■■□□□ 1.42
CCDC78-208ENST00000471861 SWAP70Q9UH65 585 aa23.95■■□□□ 1.42
CCDC78-208ENST00000471861 SLC25A27O95847 323 aa23.94■■□□□ 1.42
CCDC78-208ENST00000471861 ANKRD33Q7Z3H0 272 aa23.94■■□□□ 1.42
CCDC78-208ENST00000471861 RIOX2Q8IUF8 465 aa23.94■■□□□ 1.42
CCDC78-208ENST00000471861 SLFNL1Q499Z3 407 aa23.93■■□□□ 1.42
CCDC78-208ENST00000471861 ITPRIPQ8IWB1 547 aa23.93■■□□□ 1.42
CCDC78-208ENST00000471861 REPS2Q8NFH8 660 aa23.93■■□□□ 1.42
CCDC78-208ENST00000471861 IL1RAPL2Q9NP60 686 aa23.93■■□□□ 1.42
CCDC78-208ENST00000471861 TMEM39AQ9NV64 488 aa23.93■■□□□ 1.42
CCDC78-208ENST00000471861 ZNF214Q9UL59 606 aaPredicted RBP23.93■■□□□ 1.42
CCDC78-208ENST00000471861 SYNRGQ9UMZ2 1314 aa23.92■■□□□ 1.42
CCDC78-208ENST00000471861 PRKAB2O43741 272 aa23.92■■□□□ 1.42
CCDC78-208ENST00000471861 AKR1A1P14550 325 aa23.92■■□□□ 1.42
CCDC78-208ENST00000471861 TTF1Q15361 905 aaPredicted RBP23.92■■□□□ 1.42
CCDC78-208ENST00000471861 TJAP1Q5JTD0 557 aa23.92■■□□□ 1.42
CCDC78-208ENST00000471861 ARMT1Q9H993 441 aa23.92■■□□□ 1.42
CCDC78-208ENST00000471861 DIS3Q9Y2L1 958 aaKnown RBP23.92■■□□□ 1.42
CCDC78-208ENST00000471861 BAZ2AQ9UIF9 1905 aaKnown RBP23.92■■□□□ 1.42
CCDC78-208ENST00000471861 CYP2D7A0A087X1C5 515 aa23.91■■□□□ 1.42
CCDC78-208ENST00000471861 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.91■■□□□ 1.42
CCDC78-208ENST00000471861 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.91■■□□□ 1.42
CCDC78-208ENST00000471861 ACLYP53396 1101 aa23.91■■□□□ 1.42
CCDC78-208ENST00000471861 CCSAPQ6IQ19 270 aaPredicted RBP23.91■■□□□ 1.42
CCDC78-208ENST00000471861 TOX2Q96NM4 488 aa23.91■■□□□ 1.42
CCDC78-208ENST00000471861 ZNF576Q9H609 170 aa23.91■■□□□ 1.42
CCDC78-208ENST00000471861 SH2D4AQ9H788 454 aa23.91■■□□□ 1.42
CCDC78-208ENST00000471861 TBX21Q9UL17 535 aa23.91■■□□□ 1.42
CCDC78-208ENST00000471861 MYADML2A6NDP7 307 aa23.9■■□□□ 1.42
CCDC78-208ENST00000471861 GOLIM4O00461 696 aa23.9■■□□□ 1.42
CCDC78-208ENST00000471861 VWA5AO00534 786 aa23.9■■□□□ 1.42
CCDC78-208ENST00000471861 EEF2P13639 858 aaKnown RBP23.9■■□□□ 1.42
CCDC78-208ENST00000471861 IRX5P78411 483 aaPredicted RBP23.9■■□□□ 1.42
CCDC78-208ENST00000471861 KCTD2Q14681 263 aa23.9■■□□□ 1.42
CCDC78-208ENST00000471861 ERC1Q8IUD2 1116 aa23.9■■□□□ 1.42
CCDC78-208ENST00000471861 KLHDC9Q8NEP7 349 aa23.9■■□□□ 1.42
CCDC78-208ENST00000471861 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.9■■□□□ 1.42
CCDC78-208ENST00000471861 STARD7Q9NQZ5 370 aa23.9■■□□□ 1.42
CCDC78-208ENST00000471861 PPP1R9AQ9ULJ8 1098 aa23.9■■□□□ 1.42
CCDC78-208ENST00000471861 CHD9Q3L8U1 2897 aa23.9■■□□□ 1.42
CCDC78-208ENST00000471861 STAT3P40763 770 aa23.89■■□□□ 1.41
CCDC78-208ENST00000471861 CDK8P49336 464 aa23.89■■□□□ 1.41
CCDC78-208ENST00000471861 C16orf59Q7L2K0 433 aa23.89■■□□□ 1.41
CCDC78-208ENST00000471861 FTSJ3Q8IY81 847 aaKnown RBP23.89■■□□□ 1.41
CCDC78-208ENST00000471861 TIFAQ96CG3 184 aa23.89■■□□□ 1.41
CCDC78-208ENST00000471861 DNAJC2Q99543 621 aaKnown RBP23.89■■□□□ 1.41
CCDC78-208ENST00000471861 TSEN34Q9BSV6 310 aaKnown RBP23.89■■□□□ 1.41
CCDC78-208ENST00000471861 TIMP1P01033 207 aa23.88■■□□□ 1.41
CCDC78-208ENST00000471861 CHGBP05060 677 aa23.88■■□□□ 1.41
CCDC78-208ENST00000471861 PBX2P40425 430 aa23.88■■□□□ 1.41
CCDC78-208ENST00000471861 RHPN1Q8TCX5 695 aa23.88■■□□□ 1.41
CCDC78-208ENST00000471861 GRXCR1A8MXD5 290 aa23.87■■□□□ 1.41
CCDC78-208ENST00000471861 DCDC2CA8MYV0 355 aa23.87■■□□□ 1.41
CCDC78-208ENST00000471861 TNFRSF10AO00220 468 aa23.87■■□□□ 1.41
CCDC78-208ENST00000471861 ADCY6O43306 1168 aa23.87■■□□□ 1.41
CCDC78-208ENST00000471861 MBD4O95243 580 aa23.87■■□□□ 1.41
CCDC78-208ENST00000471861 SNAI1O95863 264 aaPredicted RBP23.87■■□□□ 1.41
CCDC78-208ENST00000471861 FAM83BQ5T0W9 1011 aa23.87■■□□□ 1.41
CCDC78-208ENST00000471861 C12orf60Q5U649 245 aa23.87■■□□□ 1.41
CCDC78-208ENST00000471861 RASIP1Q5U651 963 aa23.87■■□□□ 1.41
CCDC78-208ENST00000471861 C16orf86Q6ZW13 317 aa23.87■■□□□ 1.41
CCDC78-208ENST00000471861 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.87■■□□□ 1.41
CCDC78-208ENST00000471861 CCDC17Q96LX7 622 aa23.87■■□□□ 1.41
CCDC78-208ENST00000471861 CNPY2Q9Y2B0 182 aa23.87■■□□□ 1.41
CCDC78-208ENST00000471861 GREB1LQ9C091 1923 aaPredicted RBP23.86■■□□□ 1.41
CCDC78-208ENST00000471861 MOXD2PA6NHM9 499 aa23.86■■□□□ 1.41
CCDC78-208ENST00000471861 COL9A1P20849 921 aa23.86■■□□□ 1.41
CCDC78-208ENST00000471861 KCNA10Q16322 511 aa23.86■■□□□ 1.41
CCDC78-208ENST00000471861 TMEM240Q5SV17 173 aa23.86■■□□□ 1.41
CCDC78-208ENST00000471861 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.86■■□□□ 1.41
CCDC78-208ENST00000471861 PBX4Q9BYU1 374 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms