RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 SLC52A2Q9HAB3 445 aa9□□□□□ -0.97
SMC5-202ENST00000471372 LRRC4BQ9NT99 713 aa9□□□□□ -0.97
SMC5-202ENST00000471372 WHRNQ9P202 907 aa9□□□□□ -0.97
SMC5-202ENST00000471372 BLACEA4D250 179 aa8.99□□□□□ -0.97
SMC5-202ENST00000471372 NOP56O00567 594 aaKnown RBP8.99□□□□□ -0.97
SMC5-202ENST00000471372 RNGTTO60942 597 aaKnown RBP8.99□□□□□ -0.97
SMC5-202ENST00000471372 DRD2P14416 443 aa8.99□□□□□ -0.97
SMC5-202ENST00000471372 GSK3AP49840 483 aa8.99□□□□□ -0.97
SMC5-202ENST00000471372 STRN3Q13033 797 aa8.99□□□□□ -0.97
SMC5-202ENST00000471372 ZNF460Q14592 562 aa8.99□□□□□ -0.97
SMC5-202ENST00000471372 SF1Q15637 639 aaKnown RBP8.99□□□□□ -0.97
SMC5-202ENST00000471372 NBPF12Q5TAG4 269 aaPredicted RBP8.99□□□□□ -0.97
SMC5-202ENST00000471372 LHFPL2Q6ZUX7 228 aa8.99□□□□□ -0.97
SMC5-202ENST00000471372 PPM1KQ8N3J5 372 aa8.99□□□□□ -0.97
SMC5-202ENST00000471372 SVOPQ8N4V2 548 aa8.99□□□□□ -0.97
SMC5-202ENST00000471372 BTN2A2Q8WVV5 523 aa8.99□□□□□ -0.97
SMC5-202ENST00000471372 ADAMTS8Q9UP79 889 aa8.99□□□□□ -0.97
SMC5-202ENST00000471372 AKT3Q9Y243 479 aa8.99□□□□□ -0.97
SMC5-202ENST00000471372 EMC9Q9Y3B6 208 aa8.99□□□□□ -0.97
SMC5-202ENST00000471372 TNPO3Q9Y5L0 923 aaKnown RBP8.99□□□□□ -0.97
SMC5-202ENST00000471372 DLX3O60479 287 aa8.98□□□□□ -0.97
SMC5-202ENST00000471372 PEX14O75381 377 aa8.98□□□□□ -0.97
SMC5-202ENST00000471372 AUHQ13825 339 aaKnown RBP8.98□□□□□ -0.97
SMC5-202ENST00000471372 NUTM2GQ5VZR2 741 aa8.98□□□□□ -0.97
SMC5-202ENST00000471372 PKN3Q6P5Z2 889 aa8.98□□□□□ -0.97
SMC5-202ENST00000471372 KIAA1211Q6ZU35 1233 aa8.98□□□□□ -0.97
SMC5-202ENST00000471372 DYMQ7RTS9 669 aa8.98□□□□□ -0.97
SMC5-202ENST00000471372 TRIM59Q8IWR1 403 aa8.98□□□□□ -0.97
SMC5-202ENST00000471372 CCDC146Q8IYE0 955 aa8.98□□□□□ -0.97
SMC5-202ENST00000471372 C7orf61Q8IZ16 206 aa8.98□□□□□ -0.97
SMC5-202ENST00000471372 TMEM151AQ8N4L1 468 aa8.98□□□□□ -0.97
SMC5-202ENST00000471372 FOXQ1Q9C009 403 aa8.98□□□□□ -0.97
SMC5-202ENST00000471372 GP6Q9HCN6 339 aa8.98□□□□□ -0.97
SMC5-202ENST00000471372 COL17A1Q9UMD9 1497 aaPredicted RBP8.97□□□□□ -0.97
SMC5-202ENST00000471372 MEGF11A6BM72 1044 aa8.97□□□□□ -0.97
SMC5-202ENST00000471372 OIP5O43482 229 aa8.97□□□□□ -0.97
SMC5-202ENST00000471372 ADAMTS2O95450 1211 aa8.97□□□□□ -0.97
SMC5-202ENST00000471372 SOX4Q06945 474 aaPredicted RBP8.97□□□□□ -0.97
SMC5-202ENST00000471372 NFE2Q16621 373 aaPredicted RBP8.97□□□□□ -0.97
SMC5-202ENST00000471372 ZNF385CQ66K41 422 aaPredicted RBP8.97□□□□□ -0.97
SMC5-202ENST00000471372 ARMCX6Q7L4S7 300 aa8.97□□□□□ -0.97
SMC5-202ENST00000471372 WDR75Q8IWA0 830 aaKnown RBP8.97□□□□□ -0.97
SMC5-202ENST00000471372 GSTCDQ8NEC7 633 aa8.97□□□□□ -0.97
SMC5-202ENST00000471372 BRF1Q92994 677 aa8.97□□□□□ -0.97
SMC5-202ENST00000471372 VWCEQ96DN2 955 aa8.97□□□□□ -0.97
SMC5-202ENST00000471372 SCLYQ96I15 445 aa8.97□□□□□ -0.97
SMC5-202ENST00000471372 RCC1LQ96I51 464 aaKnown RBP8.97□□□□□ -0.97
SMC5-202ENST00000471372 C8orf48Q96LL4 319 aa8.97□□□□□ -0.97
SMC5-202ENST00000471372 ASPSCR1Q9BZE9 553 aa8.97□□□□□ -0.97
SMC5-202ENST00000471372 PIDD1Q9HB75 910 aa8.97□□□□□ -0.97
SMC5-202ENST00000471372 RIPOR2Q9Y4F9 1068 aa8.97□□□□□ -0.97
SMC5-202ENST00000471372 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.96□□□□□ -0.98
SMC5-202ENST00000471372 OPA1O60313 960 aa8.96□□□□□ -0.98
SMC5-202ENST00000471372 KCNH1O95259 989 aa8.96□□□□□ -0.98
SMC5-202ENST00000471372 GDF11O95390 407 aa8.96□□□□□ -0.98
SMC5-202ENST00000471372 AMPD1P23109 780 aa8.96□□□□□ -0.98
SMC5-202ENST00000471372 NEK4P51957 841 aa8.96□□□□□ -0.98
SMC5-202ENST00000471372 EPHB1P54762 984 aa8.96□□□□□ -0.98
SMC5-202ENST00000471372 RASSF7Q02833 373 aa8.96□□□□□ -0.98
SMC5-202ENST00000471372 LRRC41Q15345 812 aa8.96□□□□□ -0.98
SMC5-202ENST00000471372 SEPT7Q16181 437 aaKnown RBP8.96□□□□□ -0.98
SMC5-202ENST00000471372 TRAPPC3LQ5T215 181 aa8.96□□□□□ -0.98
SMC5-202ENST00000471372 ACAD11Q709F0 780 aa8.96□□□□□ -0.98
SMC5-202ENST00000471372 ARHGEF39Q8N4T4 335 aa8.96□□□□□ -0.98
SMC5-202ENST00000471372 DTWD1Q8N5C7 304 aa8.96□□□□□ -0.98
SMC5-202ENST00000471372 SMG8Q8ND04 991 aaKnown RBP8.96□□□□□ -0.98
SMC5-202ENST00000471372 DNAJB8Q8NHS0 232 aa8.96□□□□□ -0.98
SMC5-202ENST00000471372 KREMEN1Q96MU8 473 aa8.96□□□□□ -0.98
SMC5-202ENST00000471372 MTFR1LQ9H019 292 aa8.96□□□□□ -0.98
SMC5-202ENST00000471372 GSX1Q9H4S2 264 aaPredicted RBP8.96□□□□□ -0.98
SMC5-202ENST00000471372 SUGCTQ9HAC7 445 aa8.96□□□□□ -0.98
SMC5-202ENST00000471372 CYP4F12Q9HCS2 524 aa8.96□□□□□ -0.98
SMC5-202ENST00000471372 SSU72Q9NP77 194 aaKnown RBP8.96□□□□□ -0.98
SMC5-202ENST00000471372 CGGBP1Q9UFW8 167 aaPredicted RBP8.96□□□□□ -0.98
SMC5-202ENST00000471372 KRBA1A5PL33 1030 aa8.95□□□□□ -0.98
SMC5-202ENST00000471372 RBAK-RBAKDNI3L0D1 243 aa8.95□□□□□ -0.98
SMC5-202ENST00000471372 TSPAN6O43657 245 aa8.95□□□□□ -0.98
SMC5-202ENST00000471372 PRC1O43663 620 aa8.95□□□□□ -0.98
SMC5-202ENST00000471372 KPNA6O60684 536 aa8.95□□□□□ -0.98
SMC5-202ENST00000471372 ITGA4P13612 1032 aa8.95□□□□□ -0.98
SMC5-202ENST00000471372 CPEP16870 476 aa8.95□□□□□ -0.98
SMC5-202ENST00000471372 POU3F2P20265 443 aaPredicted RBP8.95□□□□□ -0.98
SMC5-202ENST00000471372 ASPAP45381 313 aa8.95□□□□□ -0.98
SMC5-202ENST00000471372 GABREP78334 506 aa8.95□□□□□ -0.98
SMC5-202ENST00000471372 MCL1Q07820 350 aa8.95□□□□□ -0.98
SMC5-202ENST00000471372 NTRK3Q16288 839 aa8.95□□□□□ -0.98
SMC5-202ENST00000471372 FBXO11Q86XK2 927 aa8.95□□□□□ -0.98
SMC5-202ENST00000471372 AHI1Q8N157 1196 aa8.95□□□□□ -0.98
SMC5-202ENST00000471372 WDR66Q8TBY9 1149 aa8.95□□□□□ -0.98
SMC5-202ENST00000471372 RNF208Q9H0X6 261 aa8.95□□□□□ -0.98
SMC5-202ENST00000471372 FAM105AQ9NUU6 356 aa8.95□□□□□ -0.98
SMC5-202ENST00000471372 CEP131Q9UPN4 1083 aa8.95□□□□□ -0.98
SMC5-202ENST00000471372 ACTL7BQ9Y614 415 aa8.95□□□□□ -0.98
SMC5-202ENST00000471372 PHLDB1Q86UU1 1377 aa8.95□□□□□ -0.98
SMC5-202ENST00000471372 TPD52L2O43399 206 aaKnown RBP8.94□□□□□ -0.98
SMC5-202ENST00000471372 LRIG2O94898 1065 aa8.94□□□□□ -0.98
SMC5-202ENST00000471372 TIAF1O95411 115 aa8.94□□□□□ -0.98
SMC5-202ENST00000471372 SLURP2P0DP57 97 aa8.94□□□□□ -0.98
SMC5-202ENST00000471372 ZNF445P59923 1031 aa8.94□□□□□ -0.98
SMC5-202ENST00000471372 MTMR1Q13613 665 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms