RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 OGDHLQ9ULD0 1010 aa18.34■□□□□ 0.53
COL1A1-203ENST00000471344 SZT2Q5T011 3432 aa18.34■□□□□ 0.53
COL1A1-203ENST00000471344 COBLO75128 1261 aa18.33■□□□□ 0.52
COL1A1-203ENST00000471344 IGHDP01880 384 aa18.33■□□□□ 0.52
COL1A1-203ENST00000471344 HOXC6P09630 235 aa18.33■□□□□ 0.52
COL1A1-203ENST00000471344 LRRFIP1Q32MZ4 808 aaKnown RBP18.33■□□□□ 0.52
COL1A1-203ENST00000471344 NCAPG2Q86XI2 1143 aa18.33■□□□□ 0.52
COL1A1-203ENST00000471344 MB21D1Q8N884 522 aa18.33■□□□□ 0.52
COL1A1-203ENST00000471344 TRPV1Q8NER1 839 aa18.33■□□□□ 0.52
COL1A1-203ENST00000471344 CEP95Q96GE4 821 aa18.33■□□□□ 0.52
COL1A1-203ENST00000471344 GOPCQ9HD26 462 aa18.33■□□□□ 0.52
COL1A1-203ENST00000471344 TACC3Q9Y6A5 838 aa18.33■□□□□ 0.52
COL1A1-203ENST00000471344 TRIOBPQ9H2D6 2365 aa18.32■□□□□ 0.52
COL1A1-203ENST00000471344 PFASO15067 1338 aa18.32■□□□□ 0.52
COL1A1-203ENST00000471344 NDUFB10O96000 172 aa18.32■□□□□ 0.52
COL1A1-203ENST00000471344 IGHA2P01877 340 aa18.32■□□□□ 0.52
COL1A1-203ENST00000471344 FAM47AQ5JRC9 791 aa18.32■□□□□ 0.52
COL1A1-203ENST00000471344 B4GALNT3Q6L9W6 998 aa18.32■□□□□ 0.52
COL1A1-203ENST00000471344 NECAB2Q7Z6G3 386 aa18.32■□□□□ 0.52
COL1A1-203ENST00000471344 LRRC47Q8N1G4 583 aaKnown RBP18.32■□□□□ 0.52
COL1A1-203ENST00000471344 SHCBP1Q8NEM2 672 aa18.32■□□□□ 0.52
COL1A1-203ENST00000471344 FAM227BQ96M60 508 aa18.32■□□□□ 0.52
COL1A1-203ENST00000471344 NAPBQ9H115 298 aa18.32■□□□□ 0.52
COL1A1-203ENST00000471344 INCENPQ9NQS7 918 aa18.32■□□□□ 0.52
COL1A1-203ENST00000471344 NYAP2Q9P242 653 aa18.32■□□□□ 0.52
COL1A1-203ENST00000471344 CLIP2Q9UDT6 1046 aa18.32■□□□□ 0.52
COL1A1-203ENST00000471344 ZBTB47Q9UFB7 747 aaPredicted RBP18.32■□□□□ 0.52
COL1A1-203ENST00000471344 PPP1R9AQ9ULJ8 1098 aa18.32■□□□□ 0.52
COL1A1-203ENST00000471344 ADAMTS5Q9UNA0 930 aa18.32■□□□□ 0.52
COL1A1-203ENST00000471344 PPARAQ07869 468 aa18.31■□□□□ 0.52
COL1A1-203ENST00000471344 ANKLE1Q8NAG6 615 aa18.31■□□□□ 0.52
COL1A1-203ENST00000471344 REPS2Q8NFH8 660 aa18.31■□□□□ 0.52
COL1A1-203ENST00000471344 PLIN4Q96Q06 1357 aa18.3■□□□□ 0.52
COL1A1-203ENST00000471344 LAMA3Q16787 3333 aa18.3■□□□□ 0.52
COL1A1-203ENST00000471344 A0A0D9SFI3 127 aa18.3■□□□□ 0.52
COL1A1-203ENST00000471344 F5H6K3 240 aa18.3■□□□□ 0.52
COL1A1-203ENST00000471344 VWA5AO00534 786 aa18.3■□□□□ 0.52
COL1A1-203ENST00000471344 EVI5O60447 810 aa18.3■□□□□ 0.52
COL1A1-203ENST00000471344 CTDSPL2Q05D32 466 aa18.3■□□□□ 0.52
COL1A1-203ENST00000471344 KLRC3Q07444 240 aa18.3■□□□□ 0.52
COL1A1-203ENST00000471344 MFSD14CQ5VZR4 134 aa18.3■□□□□ 0.52
COL1A1-203ENST00000471344 DPP9Q86TI2 863 aa18.3■□□□□ 0.52
COL1A1-203ENST00000471344 SMC5Q8IY18 1101 aa18.3■□□□□ 0.52
COL1A1-203ENST00000471344 ZNF444Q8N0Y2 327 aaPredicted RBP18.3■□□□□ 0.52
COL1A1-203ENST00000471344 CHMP4CQ96CF2 233 aa18.3■□□□□ 0.52
COL1A1-203ENST00000471344 EVI5LQ96CN4 794 aa18.3■□□□□ 0.52
COL1A1-203ENST00000471344 NACAP1Q9BZK3 213 aa18.3■□□□□ 0.52
COL1A1-203ENST00000471344 NBPF3Q9H094 633 aa18.3■□□□□ 0.52
COL1A1-203ENST00000471344 MTMR4Q9NYA4 1195 aa18.3■□□□□ 0.52
COL1A1-203ENST00000471344 ZNF214Q9UL59 606 aaPredicted RBP18.3■□□□□ 0.52
COL1A1-203ENST00000471344 ZNFX1Q9P2E3 1918 aaKnown RBP18.29■□□□□ 0.52
COL1A1-203ENST00000471344 CYBAP13498 195 aa18.29■□□□□ 0.52
COL1A1-203ENST00000471344 FXR1P51114 621 aaKnown RBP eCLIP18.29■□□□□ 0.52
COL1A1-203ENST00000471344 C7orf61Q8IZ16 206 aa18.29■□□□□ 0.52
COL1A1-203ENST00000471344 MROH8Q9H579 483 aa18.29■□□□□ 0.52
COL1A1-203ENST00000471344 C11orf49Q9H6J7 331 aa18.29■□□□□ 0.52
COL1A1-203ENST00000471344 RBM27Q9P2N5 1060 aaKnown RBP18.29■□□□□ 0.52
COL1A1-203ENST00000471344 STRNO43815 780 aa18.28■□□□□ 0.52
COL1A1-203ENST00000471344 PGK2P07205 417 aa18.28■□□□□ 0.52
COL1A1-203ENST00000471344 CAPN2P17655 700 aa18.28■□□□□ 0.52
COL1A1-203ENST00000471344 CNGA1P29973 690 aa18.28■□□□□ 0.52
COL1A1-203ENST00000471344 RASGRP2Q7LDG7 609 aa18.28■□□□□ 0.52
COL1A1-203ENST00000471344 ZNF589Q86UQ0 364 aaPredicted RBP18.28■□□□□ 0.52
COL1A1-203ENST00000471344 RIOX2Q8IUF8 465 aa18.28■□□□□ 0.52
COL1A1-203ENST00000471344 SLF1Q9BQI6 1058 aa18.28■□□□□ 0.52
COL1A1-203ENST00000471344 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.28■□□□□ 0.52
COL1A1-203ENST00000471344 NR2E3Q9Y5X4 410 aa18.28■□□□□ 0.52
COL1A1-203ENST00000471344 PLXNA1Q9UIW2 1896 aa18.28■□□□□ 0.52
COL1A1-203ENST00000471344 NMT2O60551 498 aa18.27■□□□□ 0.52
COL1A1-203ENST00000471344 TSPY3P0CV98 308 aa18.27■□□□□ 0.52
COL1A1-203ENST00000471344 TSPY8P0CW00 308 aa18.27■□□□□ 0.52
COL1A1-203ENST00000471344 COL6A1P12109 1028 aa18.27■□□□□ 0.52
COL1A1-203ENST00000471344 TFAP4Q01664 338 aa18.27■□□□□ 0.52
COL1A1-203ENST00000471344 PDE4BQ07343 736 aa18.27■□□□□ 0.52
COL1A1-203ENST00000471344 NMIQ13287 307 aaPredicted RBP18.27■□□□□ 0.52
COL1A1-203ENST00000471344 PRAMEF19Q5SWL8 479 aa18.27■□□□□ 0.52
COL1A1-203ENST00000471344 ANO1Q5XXA6 986 aa18.27■□□□□ 0.52
COL1A1-203ENST00000471344 OLFML2BQ68BL8 750 aa18.27■□□□□ 0.52
COL1A1-203ENST00000471344 NEDD1Q8NHV4 660 aa18.27■□□□□ 0.52
COL1A1-203ENST00000471344 PRO3102Q9H379 93 aa18.27■□□□□ 0.52
COL1A1-203ENST00000471344 DDX20Q9UHI6 824 aaKnown RBP18.27■□□□□ 0.52
COL1A1-203ENST00000471344 ZMYND8Q9ULU4 1186 aaPredicted RBP18.27■□□□□ 0.52
COL1A1-203ENST00000471344 TTLL1O95922 423 aa18.26■□□□□ 0.51
COL1A1-203ENST00000471344 FCER1AP12319 257 aa18.26■□□□□ 0.51
COL1A1-203ENST00000471344 STAT3P40763 770 aa18.26■□□□□ 0.51
COL1A1-203ENST00000471344 ABRAQ8N0Z2 381 aa18.26■□□□□ 0.51
COL1A1-203ENST00000471344 MKL1Q969V6 931 aa18.26■□□□□ 0.51
COL1A1-203ENST00000471344 KIFC2Q96AC6 838 aa18.26■□□□□ 0.51
COL1A1-203ENST00000471344 MAML3Q96JK9 1138 aa18.26■□□□□ 0.51
COL1A1-203ENST00000471344 MMP19Q99542 508 aa18.26■□□□□ 0.51
COL1A1-203ENST00000471344 RWDD1Q9H446 243 aaPredicted RBP18.26■□□□□ 0.51
COL1A1-203ENST00000471344 ZNF287Q9HBT7 754 aa18.26■□□□□ 0.51
COL1A1-203ENST00000471344 RIPK3Q9Y572 518 aa18.26■□□□□ 0.51
COL1A1-203ENST00000471344 TRIM6-TRIM34B2RNG4 842 aa18.25■□□□□ 0.51
COL1A1-203ENST00000471344 SLC25A27O95847 323 aa18.25■□□□□ 0.51
COL1A1-203ENST00000471344 SYN1P17600 705 aa18.25■□□□□ 0.51
COL1A1-203ENST00000471344 NUCB1Q02818 461 aa18.25■□□□□ 0.51
COL1A1-203ENST00000471344 LRRC26Q2I0M4 334 aa18.25■□□□□ 0.51
COL1A1-203ENST00000471344 CHD1LQ86WJ1 897 aa18.25■□□□□ 0.51
COL1A1-203ENST00000471344 PLEKHM2Q8IWE5 1019 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms