RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 BTBD18B2RXH4 712 aa11.72□□□□□ -0.53
RRP1B-202ENST00000470886 SARNPP82979 210 aaKnown RBP11.72□□□□□ -0.53
RRP1B-202ENST00000470886 NCBP1Q09161 790 aaKnown RBP11.72□□□□□ -0.53
RRP1B-202ENST00000470886 CALCOCO2Q13137 446 aa11.72□□□□□ -0.53
RRP1B-202ENST00000470886 RABL6Q3YEC7 729 aaPredicted RBP11.72□□□□□ -0.53
RRP1B-202ENST00000470886 NALCNQ8IZF0 1738 aa11.72□□□□□ -0.53
RRP1B-202ENST00000470886 CABLES1Q8TDN4 633 aa11.72□□□□□ -0.53
RRP1B-202ENST00000470886 NT5C3AQ9H0P0 336 aa11.72□□□□□ -0.53
RRP1B-202ENST00000470886 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.72□□□□□ -0.53
RRP1B-202ENST00000470886 COL15A1P39059 1388 aa11.72□□□□□ -0.53
RRP1B-202ENST00000470886 FLOT1O75955 427 aa11.71□□□□□ -0.53
RRP1B-202ENST00000470886 VPS54Q9P1Q0 977 aa11.71□□□□□ -0.53
RRP1B-202ENST00000470886 SETD1AO15047 1707 aaKnown RBP11.71□□□□□ -0.53
RRP1B-202ENST00000470886 H7C1W4 665 aa11.71□□□□□ -0.53
RRP1B-202ENST00000470886 SLFN14P0C7P3 912 aa11.71□□□□□ -0.53
RRP1B-202ENST00000470886 SFMBT2Q5VUG0 894 aa11.71□□□□□ -0.53
RRP1B-202ENST00000470886 USPL1Q5W0Q7 1092 aa11.71□□□□□ -0.53
RRP1B-202ENST00000470886 BLIDQ8IZY5 108 aa11.71□□□□□ -0.53
RRP1B-202ENST00000470886 PLCB1Q9NQ66 1216 aa11.71□□□□□ -0.53
RRP1B-202ENST00000470886 A0A1W2PRG0 241 aa11.71□□□□□ -0.54
RRP1B-202ENST00000470886 COPB1P53618 953 aaKnown RBP11.71□□□□□ -0.54
RRP1B-202ENST00000470886 SEL1L2Q5TEA6 688 aa11.71□□□□□ -0.54
RRP1B-202ENST00000470886 SND1Q7KZF4 910 aaKnown RBP eCLIP11.71□□□□□ -0.54
RRP1B-202ENST00000470886 IFT74Q96LB3 600 aa11.71□□□□□ -0.54
RRP1B-202ENST00000470886 UTP11Q9Y3A2 253 aaKnown RBP11.71□□□□□ -0.54
RRP1B-202ENST00000470886 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.71□□□□□ -0.54
RRP1B-202ENST00000470886 PDE8BO95263 885 aa11.71□□□□□ -0.54
RRP1B-202ENST00000470886 RCAN1P53805 252 aa11.71□□□□□ -0.54
RRP1B-202ENST00000470886 ARID5AQ03989 594 aa11.71□□□□□ -0.54
RRP1B-202ENST00000470886 STK36Q9NRP7 1315 aa11.7□□□□□ -0.54
RRP1B-202ENST00000470886 KDM3AQ9Y4C1 1321 aa11.7□□□□□ -0.54
RRP1B-202ENST00000470886 SH2B2O14492 632 aaPredicted RBP11.7□□□□□ -0.54
RRP1B-202ENST00000470886 CCNT1O60563 726 aaKnown RBP11.7□□□□□ -0.54
RRP1B-202ENST00000470886 LONRF2Q1L5Z9 754 aa11.7□□□□□ -0.54
RRP1B-202ENST00000470886 LRRC24Q50LG9 513 aa11.7□□□□□ -0.54
RRP1B-202ENST00000470886 ZBTB12Q9Y330 459 aaPredicted RBP11.7□□□□□ -0.54
RRP1B-202ENST00000470886 TNKSO95271 1327 aa11.7□□□□□ -0.54
RRP1B-202ENST00000470886 KIF1AQ12756 1690 aa11.7□□□□□ -0.54
RRP1B-202ENST00000470886 SCG2P13521 617 aa11.7□□□□□ -0.54
RRP1B-202ENST00000470886 ADD2P35612 726 aa11.7□□□□□ -0.54
RRP1B-202ENST00000470886 ZNF579Q8NAF0 562 aaKnown RBP11.7□□□□□ -0.54
RRP1B-202ENST00000470886 RNF14Q9UBS8 474 aa11.7□□□□□ -0.54
RRP1B-202ENST00000470886 SRPRBQ9Y5M8 271 aaKnown RBP11.7□□□□□ -0.54
RRP1B-202ENST00000470886 RIMS1Q86UR5 1692 aaKnown RBP11.7□□□□□ -0.54
RRP1B-202ENST00000470886 MMP1P03956 469 aa11.7□□□□□ -0.54
RRP1B-202ENST00000470886 RPN1P04843 607 aaKnown RBP11.7□□□□□ -0.54
RRP1B-202ENST00000470886 RPS6KA1Q15418 735 aa11.7□□□□□ -0.54
RRP1B-202ENST00000470886 DNAJC10Q8IXB1 793 aa11.7□□□□□ -0.54
RRP1B-202ENST00000470886 UBLCP1Q8WVY7 318 aaPredicted RBP11.7□□□□□ -0.54
RRP1B-202ENST00000470886 DHTKD1Q96HY7 919 aaPredicted RBP11.7□□□□□ -0.54
RRP1B-202ENST00000470886 ZFP91Q96JP5 570 aaPredicted RBP11.7□□□□□ -0.54
RRP1B-202ENST00000470886 DESI2Q9BSY9 194 aa11.7□□□□□ -0.54
RRP1B-202ENST00000470886 FRMD4BQ9Y2L6 1034 aa11.7□□□□□ -0.54
RRP1B-202ENST00000470886 IKBKGQ9Y6K9 419 aa11.7□□□□□ -0.54
RRP1B-202ENST00000470886 ACTN2P35609 894 aa11.69□□□□□ -0.54
RRP1B-202ENST00000470886 ADCY7P51828 1080 aa11.69□□□□□ -0.54
RRP1B-202ENST00000470886 AK8Q96MA6 479 aa11.69□□□□□ -0.54
RRP1B-202ENST00000470886 CLIC6Q96NY7 704 aa11.69□□□□□ -0.54
RRP1B-202ENST00000470886 CCDC87Q9NVE4 849 aa11.69□□□□□ -0.54
RRP1B-202ENST00000470886 TNS3Q68CZ2 1445 aa11.69□□□□□ -0.54
RRP1B-202ENST00000470886 DTNBO60941 627 aa11.69□□□□□ -0.54
RRP1B-202ENST00000470886 UBL4BQ8N7F7 174 aa11.69□□□□□ -0.54
RRP1B-202ENST00000470886 PGBD1Q96JS3 809 aa11.69□□□□□ -0.54
RRP1B-202ENST00000470886 PLIN2Q99541 437 aa11.69□□□□□ -0.54
RRP1B-202ENST00000470886 SELENOSQ9BQE4 189 aa11.69□□□□□ -0.54
RRP1B-202ENST00000470886 MAP3K15Q6ZN16 1313 aa11.69□□□□□ -0.54
RRP1B-202ENST00000470886 IGKV5-2P06315 115 aa11.69□□□□□ -0.54
RRP1B-202ENST00000470886 SEMA3FQ13275 785 aa11.69□□□□□ -0.54
RRP1B-202ENST00000470886 ZNF622Q969S3 477 aaKnown RBP eCLIP11.69□□□□□ -0.547e-10■■□□□ 13
RRP1B-202ENST00000470886 MAN1B1Q9UKM7 699 aa11.69□□□□□ -0.54
RRP1B-202ENST00000470886 NDC80O14777 642 aa11.69□□□□□ -0.54
RRP1B-202ENST00000470886 CLCN6P51797 869 aa11.69□□□□□ -0.54
RRP1B-202ENST00000470886 TERF2Q15554 542 aa11.69□□□□□ -0.54
RRP1B-202ENST00000470886 TTLL7Q6ZT98 887 aa11.69□□□□□ -0.54
RRP1B-202ENST00000470886 TEX11Q8IYF3 940 aa11.69□□□□□ -0.54
RRP1B-202ENST00000470886 FMR1NBQ8N0W7 255 aaPredicted RBP11.69□□□□□ -0.54
RRP1B-202ENST00000470886 RSRC1Q96IZ7 334 aaKnown RBP11.69□□□□□ -0.54
RRP1B-202ENST00000470886 CARD10Q9BWT7 1032 aa11.69□□□□□ -0.54
RRP1B-202ENST00000470886 PARP2Q9UGN5 583 aa11.69□□□□□ -0.54
RRP1B-202ENST00000470886 MAPK8IP1Q9UQF2 711 aa11.69□□□□□ -0.54
RRP1B-202ENST00000470886 WDR17Q8IZU2 1322 aa11.69□□□□□ -0.54
RRP1B-202ENST00000470886 M0R2C6 588 aa11.68□□□□□ -0.54
RRP1B-202ENST00000470886 KLHL30Q0D2K2 578 aa11.68□□□□□ -0.54
RRP1B-202ENST00000470886 CALCRLQ16602 461 aa11.68□□□□□ -0.54
RRP1B-202ENST00000470886 RESP18Q5W5W9 173 aa11.68□□□□□ -0.54
RRP1B-202ENST00000470886 SNX29Q8TEQ0 813 aa11.68□□□□□ -0.54
RRP1B-202ENST00000470886 RAB17Q9H0T7 212 aa11.68□□□□□ -0.54
RRP1B-202ENST00000470886 CSRNP2Q9H175 543 aa11.68□□□□□ -0.54
RRP1B-202ENST00000470886 RWDD2AQ9UIY3 292 aa11.68□□□□□ -0.54
RRP1B-202ENST00000470886 MORC2Q9Y6X9 1032 aaPredicted RBP11.68□□□□□ -0.54
RRP1B-202ENST00000470886 TAOK1Q7L7X3 1001 aa11.68□□□□□ -0.54
RRP1B-202ENST00000470886 CCDC170Q8IYT3 715 aa11.68□□□□□ -0.54
RRP1B-202ENST00000470886 REXO1Q8N1G1 1221 aaKnown RBP11.68□□□□□ -0.54
RRP1B-202ENST00000470886 SYMPKQ92797 1274 aaKnown RBP11.68□□□□□ -0.54
RRP1B-202ENST00000470886 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.68□□□□□ -0.54
RRP1B-202ENST00000470886 FAM208AQ9UK61 1670 aaKnown RBP11.68□□□□□ -0.54
RRP1B-202ENST00000470886 A0A1B0GUA9 196 aa11.68□□□□□ -0.54
RRP1B-202ENST00000470886 MAP3K9P80192 1104 aa11.68□□□□□ -0.54
RRP1B-202ENST00000470886 SETDB1Q15047 1291 aa11.68□□□□□ -0.54
RRP1B-202ENST00000470886 FBXO38Q6PIJ6 1188 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms