RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 ADM5C9JUS6 153 aa17.49■□□□□ 0.39
COL4A5-203ENST00000470339 CYTH3O43739 400 aa17.49■□□□□ 0.39
COL4A5-203ENST00000470339 USP2O75604 605 aaPredicted RBP17.49■□□□□ 0.39
COL4A5-203ENST00000470339 NDUFB10O96000 172 aa17.49■□□□□ 0.39
COL4A5-203ENST00000470339 GOLGA8HP0CJ92 632 aa17.49■□□□□ 0.39
COL4A5-203ENST00000470339 INPP5BP32019 993 aa17.49■□□□□ 0.39
COL4A5-203ENST00000470339 RESTQ13127 1097 aa17.49■□□□□ 0.39
COL4A5-203ENST00000470339 EAPPQ56P03 285 aaPredicted RBP17.49■□□□□ 0.39
COL4A5-203ENST00000470339 FOXD4L5Q5VV16 416 aaPredicted RBP17.49■□□□□ 0.39
COL4A5-203ENST00000470339 KRT40Q6A162 431 aa17.49■□□□□ 0.39
COL4A5-203ENST00000470339 ACER1Q8TDN7 264 aa17.49■□□□□ 0.39
COL4A5-203ENST00000470339 FOXD4L4Q8WXT5 416 aaPredicted RBP17.49■□□□□ 0.39
COL4A5-203ENST00000470339 RRP36Q96EU6 259 aaKnown RBP17.49■□□□□ 0.39
COL4A5-203ENST00000470339 AIFM3Q96NN9 605 aa17.49■□□□□ 0.39
COL4A5-203ENST00000470339 WRNIP1Q96S55 665 aa17.49■□□□□ 0.39
COL4A5-203ENST00000470339 PICK1Q9NRD5 415 aa17.49■□□□□ 0.39
COL4A5-203ENST00000470339 PLA2G6O60733 806 aa17.48■□□□□ 0.39
COL4A5-203ENST00000470339 BMP3P12645 472 aa17.48■□□□□ 0.39
COL4A5-203ENST00000470339 MCM4P33991 863 aa17.48■□□□□ 0.39
COL4A5-203ENST00000470339 SAFBQ15424 915 aaKnown RBP eCLIP17.48■□□□□ 0.39
COL4A5-203ENST00000470339 NFKBIBQ15653 356 aa17.48■□□□□ 0.39
COL4A5-203ENST00000470339 CCDC96Q2M329 555 aa17.48■□□□□ 0.39
COL4A5-203ENST00000470339 SLC35G1Q2M3R5 365 aa17.48■□□□□ 0.39
COL4A5-203ENST00000470339 ATL3Q6DD88 541 aa17.48■□□□□ 0.39
COL4A5-203ENST00000470339 BTNL9Q6UXG8 535 aa17.48■□□□□ 0.39
COL4A5-203ENST00000470339 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.48■□□□□ 0.39
COL4A5-203ENST00000470339 CDCA5Q96FF9 252 aa17.48■□□□□ 0.39
COL4A5-203ENST00000470339 KIAA1683Q9H0B3 1180 aa17.48■□□□□ 0.39
COL4A5-203ENST00000470339 VCPKMTQ9H867 229 aa17.48■□□□□ 0.39
COL4A5-203ENST00000470339 AS3MTQ9HBK9 375 aa17.48■□□□□ 0.39
COL4A5-203ENST00000470339 GPCPD1Q9NPB8 672 aa17.48■□□□□ 0.39
COL4A5-203ENST00000470339 FRMPD2Q68DX3 1309 aaPredicted RBP17.47■□□□□ 0.39
COL4A5-203ENST00000470339 GOLGA6L22H0YM25 854 aa17.47■□□□□ 0.39
COL4A5-203ENST00000470339 hCG_1984214I3L0E3 225 aa17.47■□□□□ 0.39
COL4A5-203ENST00000470339 MMP1P03956 469 aa17.47■□□□□ 0.39
COL4A5-203ENST00000470339 PTMSP20962 102 aa17.47■□□□□ 0.39
COL4A5-203ENST00000470339 ECE1P42892 770 aa17.47■□□□□ 0.39
COL4A5-203ENST00000470339 MAP3K9P80192 1104 aa17.47■□□□□ 0.39
COL4A5-203ENST00000470339 BRAPQ7Z569 592 aa17.47■□□□□ 0.39
COL4A5-203ENST00000470339 ZNF713Q8N859 430 aaPredicted RBP17.47■□□□□ 0.39
COL4A5-203ENST00000470339 LPAR1Q92633 364 aa17.47■□□□□ 0.39
COL4A5-203ENST00000470339 MTMR8Q96EF0 704 aa17.47■□□□□ 0.39
COL4A5-203ENST00000470339 OTOFQ9HC10 1997 aa17.46■□□□□ 0.39
COL4A5-203ENST00000470339 DDX11L8A8MPP1 907 aa17.46■□□□□ 0.39
COL4A5-203ENST00000470339 UBE2Q2LH0YL09 131 aa17.46■□□□□ 0.39
COL4A5-203ENST00000470339 PTPRAP18433 802 aa17.46■□□□□ 0.39
COL4A5-203ENST00000470339 U2AF2P26368 475 aaKnown RBP eCLIP17.46■□□□□ 0.396e-6■□□□□ 9.7
COL4A5-203ENST00000470339 IREB2P48200 963 aaKnown RBP17.46■□□□□ 0.39
COL4A5-203ENST00000470339 USP14P54578 494 aa17.46■□□□□ 0.39
COL4A5-203ENST00000470339 GUCY1B3Q02153 619 aa17.46■□□□□ 0.39
COL4A5-203ENST00000470339 MAP3K11Q16584 847 aa17.46■□□□□ 0.39
COL4A5-203ENST00000470339 MCTP1Q6DN14 999 aa17.46■□□□□ 0.39
COL4A5-203ENST00000470339 GALNT17Q6IS24 598 aa17.46■□□□□ 0.39
COL4A5-203ENST00000470339 KCTD1Q719H9 257 aa17.46■□□□□ 0.39
COL4A5-203ENST00000470339 RASGRP2Q7LDG7 609 aa17.46■□□□□ 0.39
COL4A5-203ENST00000470339 FERMT3Q86UX7 667 aa17.46■□□□□ 0.39
COL4A5-203ENST00000470339 ZKSCAN4Q969J2 545 aaPredicted RBP17.46■□□□□ 0.39
COL4A5-203ENST00000470339 PHF20Q9BVI0 1012 aa17.46■□□□□ 0.39
COL4A5-203ENST00000470339 UBA5Q9GZZ9 404 aa17.46■□□□□ 0.39
COL4A5-203ENST00000470339 FOXP1Q9H334 677 aaPredicted RBP17.46■□□□□ 0.39
COL4A5-203ENST00000470339 RRAGCQ9HB90 399 aa17.46■□□□□ 0.39
COL4A5-203ENST00000470339 SEC63Q9UGP8 760 aaKnown RBP17.46■□□□□ 0.39
COL4A5-203ENST00000470339 PNMA6FA0A0J9YX94 578 aa17.45■□□□□ 0.38
COL4A5-203ENST00000470339 UNCXA6NJT0 531 aa17.45■□□□□ 0.38
COL4A5-203ENST00000470339 USP17L10C9JJH3 530 aa17.45■□□□□ 0.38
COL4A5-203ENST00000470339 CALML3P27482 149 aa17.45■□□□□ 0.38
COL4A5-203ENST00000470339 FOSBP53539 338 aa17.45■□□□□ 0.38
COL4A5-203ENST00000470339 KIF23Q02241 960 aaPredicted RBP17.45■□□□□ 0.38
COL4A5-203ENST00000470339 OTUD7BQ6GQQ9 843 aa17.45■□□□□ 0.38
COL4A5-203ENST00000470339 TTBK2Q6IQ55 1244 aa17.45■□□□□ 0.38
COL4A5-203ENST00000470339 LDHDQ86WU2 507 aa17.45■□□□□ 0.38
COL4A5-203ENST00000470339 ADGRF4Q8IZF3 695 aa17.45■□□□□ 0.38
COL4A5-203ENST00000470339 ZNF280CQ8ND82 737 aa17.45■□□□□ 0.38
COL4A5-203ENST00000470339 CCDC12Q8WUD4 166 aaPredicted RBP17.45■□□□□ 0.38
COL4A5-203ENST00000470339 CHURC1Q8WUH1 139 aa17.45■□□□□ 0.38
COL4A5-203ENST00000470339 FEZ1Q99689 392 aa17.45■□□□□ 0.38
COL4A5-203ENST00000470339 JMJD4Q9H9V9 463 aa17.45■□□□□ 0.38
COL4A5-203ENST00000470339 GJB4Q9NTQ9 266 aa17.45■□□□□ 0.38
COL4A5-203ENST00000470339 BARHL2Q9NY43 387 aa17.45■□□□□ 0.38
COL4A5-203ENST00000470339 CLEC11AQ9Y240 323 aa17.45■□□□□ 0.38
COL4A5-203ENST00000470339 hCG_1642624A0A1W2PR95 340 aa17.44■□□□□ 0.38
COL4A5-203ENST00000470339 C19orf81C9J6K1 198 aa17.44■□□□□ 0.38
COL4A5-203ENST00000470339 RAD21O60216 631 aa17.44■□□□□ 0.38
COL4A5-203ENST00000470339 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.44■□□□□ 0.38
COL4A5-203ENST00000470339 FAM160B2Q86V87 743 aa17.44■□□□□ 0.38
COL4A5-203ENST00000470339 CCDC148Q8NFR7 591 aa17.44■□□□□ 0.38
COL4A5-203ENST00000470339 GLIS2Q9BZE0 524 aaPredicted RBP17.44■□□□□ 0.38
COL4A5-203ENST00000470339 VPS54Q9P1Q0 977 aa17.44■□□□□ 0.38
COL4A5-203ENST00000470339 CSADQ9Y600 493 aa17.44■□□□□ 0.38
COL4A5-203ENST00000470339 WDR46O15213 610 aaKnown RBP17.43■□□□□ 0.38
COL4A5-203ENST00000470339 BACE1P56817 501 aa17.43■□□□□ 0.38
COL4A5-203ENST00000470339 KRT85P78386 507 aa17.43■□□□□ 0.38
COL4A5-203ENST00000470339 CSPP1Q1MSJ5 1256 aa17.43■□□□□ 0.38
COL4A5-203ENST00000470339 KIAA1755Q5JYT7 1200 aa17.43■□□□□ 0.38
COL4A5-203ENST00000470339 ZNF396Q96N95 335 aaPredicted RBP17.43■□□□□ 0.38
COL4A5-203ENST00000470339 PIGSQ96S52 555 aa17.43■□□□□ 0.38
COL4A5-203ENST00000470339 CPVLQ9H3G5 476 aa17.43■□□□□ 0.38
COL4A5-203ENST00000470339 VAT1LQ9HCJ6 419 aa17.43■□□□□ 0.38
COL4A5-203ENST00000470339 BRMS1Q9HCU9 246 aa17.43■□□□□ 0.38
COL4A5-203ENST00000470339 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms