RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 TOB2Q14106 344 aaPredicted RBP12.36□□□□□ -0.43
SMC1A-206ENST00000470241 OTUD7BQ6GQQ9 843 aa12.36□□□□□ -0.43
SMC1A-206ENST00000470241 NFXL1Q6ZNB6 911 aa12.36□□□□□ -0.43
SMC1A-206ENST00000470241 KCTD1Q719H9 257 aa12.36□□□□□ -0.43
SMC1A-206ENST00000470241 ZNF654Q8IZM8 581 aa12.36□□□□□ -0.43
SMC1A-206ENST00000470241 TMTC2Q8N394 836 aa12.36□□□□□ -0.43
SMC1A-206ENST00000470241 JMYQ8N9B5 988 aa12.36□□□□□ -0.43
SMC1A-206ENST00000470241 ASCC2Q9H1I8 757 aaPredicted RBP12.36□□□□□ -0.43
SMC1A-206ENST00000470241 FBXO28Q9NVF7 368 aa12.36□□□□□ -0.43
SMC1A-206ENST00000470241 RNF186Q9NXI6 227 aa12.36□□□□□ -0.43
SMC1A-206ENST00000470241 BRPF3Q9ULD4 1205 aa12.36□□□□□ -0.43
SMC1A-206ENST00000470241 CCDC69A6NI79 296 aa12.35□□□□□ -0.43
SMC1A-206ENST00000470241 ALDH1A1P00352 501 aa12.35□□□□□ -0.43
SMC1A-206ENST00000470241 OSBPP22059 807 aa12.35□□□□□ -0.43
SMC1A-206ENST00000470241 FGD1P98174 961 aa12.35□□□□□ -0.43
SMC1A-206ENST00000470241 ZNF543Q08ER8 600 aa12.35□□□□□ -0.43
SMC1A-206ENST00000470241 APOBRQ0VD83 1088 aa12.35□□□□□ -0.43
SMC1A-206ENST00000470241 CATIPQ7Z7H3 387 aa12.35□□□□□ -0.43
SMC1A-206ENST00000470241 BRF1Q92994 677 aa12.35□□□□□ -0.43
SMC1A-206ENST00000470241 P2RX7Q99572 595 aaKnown RBP12.35□□□□□ -0.43
SMC1A-206ENST00000470241 MYL10Q9BUA6 226 aa12.35□□□□□ -0.43
SMC1A-206ENST00000470241 TANGO6Q9C0B7 1094 aa12.35□□□□□ -0.43
SMC1A-206ENST00000470241 ALDH8A1Q9H2A2 487 aaPredicted RBP12.35□□□□□ -0.43
SMC1A-206ENST00000470241 PTPRFP10586 1907 aa12.35□□□□□ -0.43
SMC1A-206ENST00000470241 FRMPD2Q68DX3 1309 aaPredicted RBP12.35□□□□□ -0.43
SMC1A-206ENST00000470241 ADGRA2Q96PE1 1338 aa12.35□□□□□ -0.43
SMC1A-206ENST00000470241 KLF18A0A0U1RQI7 1052 aa12.34□□□□□ -0.43
SMC1A-206ENST00000470241 TMEM232C9JQI7 657 aa12.34□□□□□ -0.43
SMC1A-206ENST00000470241 CA12O43570 354 aa12.34□□□□□ -0.43
SMC1A-206ENST00000470241 FLOT1O75955 427 aa12.34□□□□□ -0.43
SMC1A-206ENST00000470241 DDAH1O94760 285 aa12.34□□□□□ -0.43
SMC1A-206ENST00000470241 GOLGA8HP0CJ92 632 aa12.34□□□□□ -0.43
SMC1A-206ENST00000470241 RXRAP19793 462 aa12.34□□□□□ -0.43
SMC1A-206ENST00000470241 NEK4P51957 841 aa12.34□□□□□ -0.43
SMC1A-206ENST00000470241 EVCP57679 992 aa12.34□□□□□ -0.43
SMC1A-206ENST00000470241 IRX3P78415 501 aaPredicted RBP12.34□□□□□ -0.43
SMC1A-206ENST00000470241 MAP2K1Q02750 393 aaPredicted RBP12.34□□□□□ -0.43
SMC1A-206ENST00000470241 CRHR2Q13324 411 aa12.34□□□□□ -0.43
SMC1A-206ENST00000470241 COG2Q14746 738 aa12.34□□□□□ -0.43
SMC1A-206ENST00000470241 GRM4Q14833 912 aa12.34□□□□□ -0.43
SMC1A-206ENST00000470241 TAF1CQ15572 869 aaPredicted RBP12.34□□□□□ -0.43
SMC1A-206ENST00000470241 CCDC96Q2M329 555 aa12.34□□□□□ -0.43
SMC1A-206ENST00000470241 TTBK2Q6IQ55 1244 aa12.34□□□□□ -0.43
SMC1A-206ENST00000470241 APOA5Q6Q788 366 aa12.34□□□□□ -0.43
SMC1A-206ENST00000470241 POTEEQ6S8J3 1075 aa12.34□□□□□ -0.43
SMC1A-206ENST00000470241 RAB11FIP4Q86YS3 637 aa12.34□□□□□ -0.43
SMC1A-206ENST00000470241 NUP133Q8WUM0 1156 aa12.34□□□□□ -0.43
SMC1A-206ENST00000470241 PARK7Q99497 189 aaKnown RBP12.34□□□□□ -0.43
SMC1A-206ENST00000470241 LARP6Q9BRS8 491 aaKnown RBP12.34□□□□□ -0.43
SMC1A-206ENST00000470241 R3HDMLQ9H3Y0 253 aa12.34□□□□□ -0.43
SMC1A-206ENST00000470241 GPCPD1Q9NPB8 672 aa12.34□□□□□ -0.43
SMC1A-206ENST00000470241 WBP1LQ9NX94 342 aa12.34□□□□□ -0.43
SMC1A-206ENST00000470241 PNMA3Q9UL41 463 aa12.34□□□□□ -0.43
SMC1A-206ENST00000470241 SLC12A7Q9Y666 1083 aa12.34□□□□□ -0.43
SMC1A-206ENST00000470241 PALM3A6NDB9 673 aaPredicted RBP12.33□□□□□ -0.44
SMC1A-206ENST00000470241 SPDYE16A6NNV3 312 aaPredicted RBP12.33□□□□□ -0.44
SMC1A-206ENST00000470241 PLA2G6O60733 806 aa12.33□□□□□ -0.44
SMC1A-206ENST00000470241 TRPA1O75762 1119 aa12.33□□□□□ -0.44
SMC1A-206ENST00000470241 PARP1P09874 1014 aaKnown RBP12.33□□□□□ -0.44
SMC1A-206ENST00000470241 DSG3P32926 999 aa12.33□□□□□ -0.44
SMC1A-206ENST00000470241 AK2P54819 239 aa12.33□□□□□ -0.44
SMC1A-206ENST00000470241 HERVK_113P62684 666 aa12.33□□□□□ -0.44
SMC1A-206ENST00000470241 RABEP1Q15276 862 aa12.33□□□□□ -0.44
SMC1A-206ENST00000470241 ASPRV1Q53RT3 343 aa12.33□□□□□ -0.44
SMC1A-206ENST00000470241 BTNL9Q6UXG8 535 aa12.33□□□□□ -0.44
SMC1A-206ENST00000470241 STAG2Q8N3U4 1231 aa12.33□□□□□ -0.44
SMC1A-206ENST00000470241 MAP3K14Q99558 947 aa12.33□□□□□ -0.44
SMC1A-206ENST00000470241 SLF1Q9BQI6 1058 aa12.33□□□□□ -0.44
SMC1A-206ENST00000470241 CFHR5Q9BXR6 569 aa12.33□□□□□ -0.44
SMC1A-206ENST00000470241 ZFYVE28Q9HCC9 887 aa12.33□□□□□ -0.44
SMC1A-206ENST00000470241 SAGE1Q9NXZ1 904 aa12.33□□□□□ -0.44
SMC1A-206ENST00000470241 MAD2L2Q9UI95 211 aa12.33□□□□□ -0.44
SMC1A-206ENST00000470241 FEM1BQ9UK73 627 aa12.33□□□□□ -0.44
SMC1A-206ENST00000470241 PPP1R9AQ9ULJ8 1098 aa12.33□□□□□ -0.44
SMC1A-206ENST00000470241 HPS5Q9UPZ3 1129 aa12.33□□□□□ -0.44
SMC1A-206ENST00000470241 MYPNQ86TC9 1320 aa12.33□□□□□ -0.44
SMC1A-206ENST00000470241 ZBTB43O43298 467 aa12.32□□□□□ -0.44
SMC1A-206ENST00000470241 TLR2O60603 784 aa12.32□□□□□ -0.44
SMC1A-206ENST00000470241 TBC1D8O95759 1140 aa12.32□□□□□ -0.44
SMC1A-206ENST00000470241 CALM1P0DP23 149 aa12.32□□□□□ -0.44
SMC1A-206ENST00000470241 CALM2P0DP24 149 aa12.32□□□□□ -0.44
SMC1A-206ENST00000470241 CALM3P0DP25 149 aa12.32□□□□□ -0.44
SMC1A-206ENST00000470241 SLC16A2P36021 539 aa12.32□□□□□ -0.44
SMC1A-206ENST00000470241 STAT2P52630 851 aa12.32□□□□□ -0.44
SMC1A-206ENST00000470241 SLC35G1Q2M3R5 365 aa12.32□□□□□ -0.44
SMC1A-206ENST00000470241 GPATCH4Q5T3I0 446 aaKnown RBP12.32□□□□□ -0.44
SMC1A-206ENST00000470241 LBX2Q6XYB7 198 aa12.32□□□□□ -0.44
SMC1A-206ENST00000470241 SYNE3Q6ZMZ3 975 aa12.32□□□□□ -0.44
SMC1A-206ENST00000470241 FAM160B2Q86V87 743 aa12.32□□□□□ -0.44
SMC1A-206ENST00000470241 MICU3Q86XE3 530 aa12.32□□□□□ -0.44
SMC1A-206ENST00000470241 CCDC144CPQ8IYA2 1237 aa12.32□□□□□ -0.44
SMC1A-206ENST00000470241 CHURC1Q8WUH1 139 aa12.32□□□□□ -0.44
SMC1A-206ENST00000470241 ATG4CQ96DT6 458 aa12.32□□□□□ -0.44
SMC1A-206ENST00000470241 CPVLQ9H3G5 476 aa12.32□□□□□ -0.44
SMC1A-206ENST00000470241 HOXC10Q9NYD6 342 aa12.32□□□□□ -0.44
SMC1A-206ENST00000470241 TPCN1Q9ULQ1 816 aa12.32□□□□□ -0.44
SMC1A-206ENST00000470241 ISY1Q9ULR0 285 aaKnown RBP12.32□□□□□ -0.44
SMC1A-206ENST00000470241 ADAMTS5Q9UNA0 930 aa12.32□□□□□ -0.44
SMC1A-206ENST00000470241 MYH4Q9Y623 1939 aa12.31□□□□□ -0.44
SMC1A-206ENST00000470241 GOLGA8BA8MQT2 603 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms