RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 ZNF18P17022 549 aa22.83■■□□□ 1.25
CDHR3-207ENST00000470188 CDK11BP21127 795 aaKnown RBP22.83■■□□□ 1.25
CDHR3-207ENST00000470188 PPP4CP60510 307 aa22.83■■□□□ 1.25
CDHR3-207ENST00000470188 PRR5LQ6MZQ0 368 aa22.83■■□□□ 1.25
CDHR3-207ENST00000470188 C15orf52Q6ZUT6 534 aaKnown RBP22.83■■□□□ 1.25
CDHR3-207ENST00000470188 SH3RF1Q7Z6J0 888 aa22.83■■□□□ 1.25
CDHR3-207ENST00000470188 ANKS1AQ92625 1134 aa22.83■■□□□ 1.25
CDHR3-207ENST00000470188 INTS13Q9NVM9 706 aa22.83■■□□□ 1.25
CDHR3-207ENST00000470188 PHLPP2Q6ZVD8 1323 aa22.83■■□□□ 1.25
CDHR3-207ENST00000470188 LDHCP07864 332 aa22.83■■□□□ 1.24
CDHR3-207ENST00000470188 CALML3P27482 149 aa22.83■■□□□ 1.24
CDHR3-207ENST00000470188 ERCC5P28715 1186 aaPredicted RBP22.83■■□□□ 1.24
CDHR3-207ENST00000470188 QTRT2Q9H974 415 aaKnown RBP22.83■■□□□ 1.24
CDHR3-207ENST00000470188 ARGLU1Q9NWB6 273 aaPredicted RBP22.83■■□□□ 1.24
CDHR3-207ENST00000470188 FHOD1Q9Y613 1164 aa22.83■■□□□ 1.24
CDHR3-207ENST00000470188 CCDC178Q5BJE1 867 aa22.82■■□□□ 1.24
CDHR3-207ENST00000470188 TGFBRAP1Q8WUH2 860 aa22.82■■□□□ 1.24
CDHR3-207ENST00000470188 SRRTQ9BXP5 876 aaKnown RBP22.82■■□□□ 1.24
CDHR3-207ENST00000470188 ONECUT3O60422 494 aaPredicted RBP22.82■■□□□ 1.24
CDHR3-207ENST00000470188 TSPY3P0CV98 308 aa22.82■■□□□ 1.24
CDHR3-207ENST00000470188 TSPY8P0CW00 308 aa22.82■■□□□ 1.24
CDHR3-207ENST00000470188 ADRA2BP18089 450 aa22.82■■□□□ 1.24
CDHR3-207ENST00000470188 CLCN6P51797 869 aa22.82■■□□□ 1.24
CDHR3-207ENST00000470188 GPSM2P81274 684 aa22.82■■□□□ 1.24
CDHR3-207ENST00000470188 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.81■■□□□ 1.24
CDHR3-207ENST00000470188 GRM4Q14833 912 aa22.81■■□□□ 1.24
CDHR3-207ENST00000470188 PTPN21Q16825 1174 aa22.81■■□□□ 1.24
CDHR3-207ENST00000470188 USP17L3A6NCW0 530 aa22.8■■□□□ 1.24
CDHR3-207ENST00000470188 USP17L4A6NCW7 530 aa22.8■■□□□ 1.24
CDHR3-207ENST00000470188 ADAMTS3O15072 1205 aa22.8■■□□□ 1.24
CDHR3-207ENST00000470188 CYP2C19P33261 490 aa22.8■■□□□ 1.24
CDHR3-207ENST00000470188 MCM7P33993 719 aa22.8■■□□□ 1.24
CDHR3-207ENST00000470188 ETF1P62495 437 aaKnown RBP22.8■■□□□ 1.24
CDHR3-207ENST00000470188 CT47A1Q5JQC4 288 aaPredicted RBP22.8■■□□□ 1.24
CDHR3-207ENST00000470188 USP17L1Q7RTZ2 530 aa22.8■■□□□ 1.24
CDHR3-207ENST00000470188 ZNF444Q8N0Y2 327 aaPredicted RBP22.8■■□□□ 1.24
CDHR3-207ENST00000470188 STAG2Q8N3U4 1231 aa22.8■■□□□ 1.24
CDHR3-207ENST00000470188 MED15Q96RN5 788 aa22.8■■□□□ 1.24
CDHR3-207ENST00000470188 SH3GLB2Q9NR46 395 aa22.8■■□□□ 1.24
CDHR3-207ENST00000470188 LRRC4BQ9NT99 713 aa22.8■■□□□ 1.24
CDHR3-207ENST00000470188 UFL1O94874 794 aa22.8■■□□□ 1.24
CDHR3-207ENST00000470188 GNAQP50148 359 aa22.8■■□□□ 1.24
CDHR3-207ENST00000470188 DPYDQ12882 1025 aa22.8■■□□□ 1.24
CDHR3-207ENST00000470188 BLIDQ8IZY5 108 aa22.8■■□□□ 1.24
CDHR3-207ENST00000470188 GPKOWQ92917 476 aaPredicted RBP eCLIP22.8■■□□□ 1.24
CDHR3-207ENST00000470188 RTFDC1Q9BY42 306 aaPredicted RBP22.8■■□□□ 1.24
CDHR3-207ENST00000470188 TMX1Q9H3N1 280 aa22.8■■□□□ 1.24
CDHR3-207ENST00000470188 TCP11L1Q9NUJ3 509 aa22.8■■□□□ 1.24
CDHR3-207ENST00000470188 TMEM51Q9NW97 253 aa22.8■■□□□ 1.24
CDHR3-207ENST00000470188 BAZ2BQ9UIF8 2168 aaKnown RBP22.8■■□□□ 1.24
CDHR3-207ENST00000470188 TPM1P09493 284 aa22.79■■□□□ 1.24
CDHR3-207ENST00000470188 CASP1P29466 404 aa22.79■■□□□ 1.24
CDHR3-207ENST00000470188 ARHGAP29Q52LW3 1261 aa22.79■■□□□ 1.24
CDHR3-207ENST00000470188 MAPKAPK5Q8IW41 473 aa22.79■■□□□ 1.24
CDHR3-207ENST00000470188 GSDMAQ96QA5 445 aa22.79■■□□□ 1.24
CDHR3-207ENST00000470188 CD209Q9NNX6 404 aa22.79■■□□□ 1.24
CDHR3-207ENST00000470188 SAMSN1Q9NSI8 373 aaKnown RBP22.79■■□□□ 1.24
CDHR3-207ENST00000470188 SAP30BPQ9UHR5 308 aaKnown RBP22.79■■□□□ 1.24
CDHR3-207ENST00000470188 ATP8B1O43520 1251 aa22.79■■□□□ 1.24
CDHR3-207ENST00000470188 PNMA6AP0CW24 399 aaPredicted RBP22.79■■□□□ 1.24
CDHR3-207ENST00000470188 SLC44A5Q8NCS7 719 aa22.79■■□□□ 1.24
CDHR3-207ENST00000470188 MAD2L2Q9UI95 211 aa22.79■■□□□ 1.24
CDHR3-207ENST00000470188 PCDHA4Q9UN74 947 aa22.79■■□□□ 1.24
CDHR3-207ENST00000470188 ATP2B4P23634 1241 aa22.78■■□□□ 1.24
CDHR3-207ENST00000470188 ST5P78524 1137 aa22.78■■□□□ 1.24
CDHR3-207ENST00000470188 CRY2Q49AN0 593 aa22.78■■□□□ 1.24
CDHR3-207ENST00000470188 CERS3Q8IU89 383 aa22.78■■□□□ 1.24
CDHR3-207ENST00000470188 IQUBQ8NA54 791 aa22.78■■□□□ 1.24
CDHR3-207ENST00000470188 UBXN4Q92575 508 aa22.78■■□□□ 1.24
CDHR3-207ENST00000470188 ST7Q9NRC1 585 aa22.78■■□□□ 1.24
CDHR3-207ENST00000470188 ZRANB2O95218 330 aaKnown RBP eCLIP22.77■■□□□ 1.24
CDHR3-207ENST00000470188 BTDP43251 543 aa22.77■■□□□ 1.24
CDHR3-207ENST00000470188 GOLGA8FQ08AF8 430 aa22.77■■□□□ 1.24
CDHR3-207ENST00000470188 GOLGA8DPQ0D2H9 430 aa22.77■■□□□ 1.24
CDHR3-207ENST00000470188 TBX2Q13207 712 aaPredicted RBP22.77■■□□□ 1.24
CDHR3-207ENST00000470188 TMCO3Q6UWJ1 677 aa22.77■■□□□ 1.24
CDHR3-207ENST00000470188 HOMER1Q86YM7 354 aa22.77■■□□□ 1.24
CDHR3-207ENST00000470188 PYM1Q9BRP8 204 aaKnown RBP22.77■■□□□ 1.24
CDHR3-207ENST00000470188 GGA1Q9UJY5 639 aa22.77■■□□□ 1.24
CDHR3-207ENST00000470188 NAV1Q8NEY1 1877 aa22.77■■□□□ 1.24
CDHR3-207ENST00000470188 IL17AQ16552 155 aa22.77■■□□□ 1.24
CDHR3-207ENST00000470188 SPECC1LQ69YQ0 1117 aa22.77■■□□□ 1.24
CDHR3-207ENST00000470188 SEPT12Q8IYM1 358 aa22.77■■□□□ 1.24
CDHR3-207ENST00000470188 ZNF287Q9HBT7 754 aa22.77■■□□□ 1.24
CDHR3-207ENST00000470188 STX8Q9UNK0 236 aa22.77■■□□□ 1.24
CDHR3-207ENST00000470188 FAM205AQ6ZU69 1335 aa22.77■■□□□ 1.24
CDHR3-207ENST00000470188 SYNRGQ9UMZ2 1314 aa22.77■■□□□ 1.24
CDHR3-207ENST00000470188 CD44P16070 742 aaKnown RBP22.76■■□□□ 1.23
CDHR3-207ENST00000470188 RASA1P20936 1047 aa22.76■■□□□ 1.23
CDHR3-207ENST00000470188 E2F4Q16254 413 aa22.76■■□□□ 1.23
CDHR3-207ENST00000470188 SPATA1Q5VX52 437 aa22.76■■□□□ 1.23
CDHR3-207ENST00000470188 ARL6IP4Q66PJ3 421 aaKnown RBP22.76■■□□□ 1.23
CDHR3-207ENST00000470188 KLHL10Q6JEL2 608 aa22.76■■□□□ 1.23
CDHR3-207ENST00000470188 RBM17Q96I25 401 aaKnown RBP22.76■■□□□ 1.23
CDHR3-207ENST00000470188 ERICH4A6NGS2 130 aa22.76■■□□□ 1.23
CDHR3-207ENST00000470188 GYS1P13807 737 aa22.76■■□□□ 1.23
CDHR3-207ENST00000470188 IL1R1P14778 569 aa22.76■■□□□ 1.23
CDHR3-207ENST00000470188 CUL4BQ13620 913 aa22.76■■□□□ 1.23
CDHR3-207ENST00000470188 TEX35Q5T0J7 233 aa22.76■■□□□ 1.23
CDHR3-207ENST00000470188 BBXQ8WY36 941 aaPredicted RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms