RNA–Protein interactions for RNA: ENST00000470117.2

USP30-205, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-205ENST00000470117 FBXO28Q9NVF7 368 aa11.21□□□□□ -0.61
USP30-205ENST00000470117 SLC5A4Q9NY91 659 aa11.21□□□□□ -0.61
USP30-205ENST00000470117 GREB1LQ9C091 1923 aaPredicted RBP11.21□□□□□ -0.62
USP30-205ENST00000470117 TTC41PQ6P2S7 1318 aa11.2□□□□□ -0.62
USP30-205ENST00000470117 GSG1L2A8MUP6 293 aa11.2□□□□□ -0.62
USP30-205ENST00000470117 M0R2C6 588 aa11.2□□□□□ -0.62
USP30-205ENST00000470117 ERC2O15083 957 aa11.2□□□□□ -0.62
USP30-205ENST00000470117 MYCNP04198 464 aaPredicted RBP11.2□□□□□ -0.62
USP30-205ENST00000470117 COL6A1P12109 1028 aa11.2□□□□□ -0.62
USP30-205ENST00000470117 CYBAP13498 195 aa11.2□□□□□ -0.62
USP30-205ENST00000470117 GNAT2P19087 354 aa11.2□□□□□ -0.62
USP30-205ENST00000470117 RASA1P20936 1047 aa11.2□□□□□ -0.62
USP30-205ENST00000470117 SBK1Q52WX2 424 aa11.2□□□□□ -0.62
USP30-205ENST00000470117 OLFML2BQ68BL8 750 aa11.2□□□□□ -0.62
USP30-205ENST00000470117 GIMAP6Q6P9H5 292 aa11.2□□□□□ -0.62
USP30-205ENST00000470117 FSD1Q9BTV5 496 aa11.2□□□□□ -0.62
USP30-205ENST00000470117 EPB41L4AQ9HCS5 686 aaPredicted RBP11.2□□□□□ -0.62
USP30-205ENST00000470117 ZBTB47Q9UFB7 747 aaPredicted RBP11.2□□□□□ -0.62
USP30-205ENST00000470117 COL11A1P12107 1806 aaPredicted RBP11.2□□□□□ -0.62
USP30-205ENST00000470117 COBLO75128 1261 aa11.19□□□□□ -0.62
USP30-205ENST00000470117 SLC25A27O95847 323 aa11.19□□□□□ -0.62
USP30-205ENST00000470117 FCER1AP12319 257 aa11.19□□□□□ -0.62
USP30-205ENST00000470117 MAGEA10P43363 369 aaPredicted RBP11.19□□□□□ -0.62
USP30-205ENST00000470117 RRP1P56182 461 aaKnown RBP11.19□□□□□ -0.62
USP30-205ENST00000470117 KCTD2Q14681 263 aa11.19□□□□□ -0.62
USP30-205ENST00000470117 TMEM132BQ14DG7 1078 aa11.19□□□□□ -0.62
USP30-205ENST00000470117 LRRC26Q2I0M4 334 aa11.19□□□□□ -0.62
USP30-205ENST00000470117 ANO1Q5XXA6 986 aa11.19□□□□□ -0.62
USP30-205ENST00000470117 ABRAQ8N0Z2 381 aa11.19□□□□□ -0.62
USP30-205ENST00000470117 TRPV1Q8NER1 839 aa11.19□□□□□ -0.62
USP30-205ENST00000470117 OTUD7AQ8TE49 926 aaPredicted RBP11.19□□□□□ -0.62
USP30-205ENST00000470117 MMP19Q99542 508 aa11.19□□□□□ -0.62
USP30-205ENST00000470117 NUP88Q99567 741 aaPredicted RBP11.19□□□□□ -0.62
USP30-205ENST00000470117 GDF15Q99988 308 aa11.19□□□□□ -0.62
USP30-205ENST00000470117 NACAP1Q9BZK3 213 aa11.19□□□□□ -0.62
USP30-205ENST00000470117 SENP6Q9GZR1 1112 aaPredicted RBP11.19□□□□□ -0.62
USP30-205ENST00000470117 ZNF287Q9HBT7 754 aa11.19□□□□□ -0.62
USP30-205ENST00000470117 FOXD4L1Q9NU39 408 aa11.19□□□□□ -0.62
USP30-205ENST00000470117 PPP1R9AQ9ULJ8 1098 aa11.19□□□□□ -0.62
USP30-205ENST00000470117 ISY1Q9ULR0 285 aaKnown RBP11.19□□□□□ -0.62
USP30-205ENST00000470117 PCDHB15Q9Y5E8 787 aa11.19□□□□□ -0.62
USP30-205ENST00000470117 KBTBD13C9JR72 458 aa11.18□□□□□ -0.62
USP30-205ENST00000470117 DNM1LO00429 736 aa11.18□□□□□ -0.62
USP30-205ENST00000470117 VWA5AO00534 786 aa11.18□□□□□ -0.62
USP30-205ENST00000470117 PRDM1O75626 825 aa11.18□□□□□ -0.62
USP30-205ENST00000470117 MX1P20591 662 aa11.18□□□□□ -0.62
USP30-205ENST00000470117 ATN1P54259 1190 aaPredicted RBP11.18□□□□□ -0.62
USP30-205ENST00000470117 RIOX2Q8IUF8 465 aa11.18□□□□□ -0.62
USP30-205ENST00000470117 ZNF444Q8N0Y2 327 aaPredicted RBP11.18□□□□□ -0.62
USP30-205ENST00000470117 PI4K2BQ8TCG2 481 aa11.18□□□□□ -0.62
USP30-205ENST00000470117 MAML3Q96JK9 1138 aa11.18□□□□□ -0.62
USP30-205ENST00000470117 SLF1Q9BQI6 1058 aa11.18□□□□□ -0.62
USP30-205ENST00000470117 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.18□□□□□ -0.62
USP30-205ENST00000470117 NAPBQ9H115 298 aa11.18□□□□□ -0.62
USP30-205ENST00000470117 CTDP1Q9Y5B0 961 aaPredicted RBP11.18□□□□□ -0.62
USP30-205ENST00000470117 MYH4Q9Y623 1939 aa11.17□□□□□ -0.62
USP30-205ENST00000470117 SOX1O00570 391 aaPredicted RBP11.17□□□□□ -0.62
USP30-205ENST00000470117 SEPT4O43236 478 aa11.17□□□□□ -0.62
USP30-205ENST00000470117 NDUFB10O96000 172 aa11.17□□□□□ -0.62
USP30-205ENST00000470117 PGK2P07205 417 aa11.17□□□□□ -0.62
USP30-205ENST00000470117 BMP8BP34820 402 aa11.17□□□□□ -0.62
USP30-205ENST00000470117 COPB2P35606 906 aa11.17□□□□□ -0.62
USP30-205ENST00000470117 STAT3P40763 770 aa11.17□□□□□ -0.62
USP30-205ENST00000470117 SLC4A3P48751 1232 aa11.17□□□□□ -0.62
USP30-205ENST00000470117 GJC2Q5T442 439 aaPredicted RBP11.17□□□□□ -0.62
USP30-205ENST00000470117 LRRC47Q8N1G4 583 aaKnown RBP11.17□□□□□ -0.62
USP30-205ENST00000470117 ARRDC4Q8NCT1 418 aa11.17□□□□□ -0.62
USP30-205ENST00000470117 LRCH3Q96II8 777 aa11.17□□□□□ -0.62
USP30-205ENST00000470117 SEC62Q99442 399 aaKnown RBP11.17□□□□□ -0.62
USP30-205ENST00000470117 UBE2OQ9C0C9 1292 aaKnown RBP11.17□□□□□ -0.62
USP30-205ENST00000470117 NYAP2Q9P242 653 aa11.17□□□□□ -0.62
USP30-205ENST00000470117 CLIP2Q9UDT6 1046 aa11.17□□□□□ -0.62
USP30-205ENST00000470117 F5H6K3 240 aa11.16□□□□□ -0.62
USP30-205ENST00000470117 IGHA2P01877 340 aa11.16□□□□□ -0.62
USP30-205ENST00000470117 SLC3A2P08195 630 aaKnown RBP11.16□□□□□ -0.62
USP30-205ENST00000470117 TSPY3P0CV98 308 aa11.16□□□□□ -0.62
USP30-205ENST00000470117 TSPY8P0CW00 308 aa11.16□□□□□ -0.62
USP30-205ENST00000470117 MDM2Q00987 491 aaPredicted RBP11.16□□□□□ -0.62
USP30-205ENST00000470117 PDE4BQ07343 736 aa11.16□□□□□ -0.62
USP30-205ENST00000470117 KLRC3Q07444 240 aa11.16□□□□□ -0.62
USP30-205ENST00000470117 PRAMEF19Q5SWL8 479 aa11.16□□□□□ -0.62
USP30-205ENST00000470117 SNRNP48Q6IEG0 339 aaKnown RBP11.16□□□□□ -0.62
USP30-205ENST00000470117 IFNL3Q8IZI9 196 aa11.16□□□□□ -0.62
USP30-205ENST00000470117 CEP95Q96GE4 821 aa11.16□□□□□ -0.62
USP30-205ENST00000470117 CRBNQ96SW2 442 aa11.16□□□□□ -0.62
USP30-205ENST00000470117 TEX13BQ9BXU2 312 aa11.16□□□□□ -0.62
USP30-205ENST00000470117 PRKAG2Q9UGJ0 569 aa11.16□□□□□ -0.62
USP30-205ENST00000470117 ZNF214Q9UL59 606 aaPredicted RBP11.16□□□□□ -0.62
USP30-205ENST00000470117 ADAMTS5Q9UNA0 930 aa11.16□□□□□ -0.62
USP30-205ENST00000470117 ATP11BQ9Y2G3 1177 aa11.16□□□□□ -0.62
USP30-205ENST00000470117 PLXNA1Q9UIW2 1896 aa11.16□□□□□ -0.62
USP30-205ENST00000470117 IGKV6D-41A0A0C4DH26 115 aa11.15□□□□□ -0.62
USP30-205ENST00000470117 PATL2C9JE40 543 aaKnown RBP11.15□□□□□ -0.62
USP30-205ENST00000470117 TTLL1O95922 423 aa11.15□□□□□ -0.62
USP30-205ENST00000470117 RTP1P59025 263 aa11.15□□□□□ -0.62
USP30-205ENST00000470117 PPARAQ07869 468 aa11.15□□□□□ -0.62
USP30-205ENST00000470117 FAM47AQ5JRC9 791 aa11.15□□□□□ -0.62
USP30-205ENST00000470117 ZMYM1Q5SVZ6 1142 aa11.15□□□□□ -0.62
USP30-205ENST00000470117 TDHQ8IZJ6 230 aa11.15□□□□□ -0.62
USP30-205ENST00000470117 CPXCR1Q8N123 301 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms