RNA–Protein interactions for RNA: ENST00000469882.5

FXR1-208, Transcript of FMR1 autosomal homolog 1, human

TSL 3

Gene FXR1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-208	ENST00000469882	TMEM132B	Q14DG7	1078 aa		13.42	□□□□□ -0.26
FXR1-208	ENST00000469882	FAM47A	Q5JRC9	791 aa		13.42	□□□□□ -0.26
FXR1-208	ENST00000469882	PLEKHM2	Q8IWE5	1019 aa		13.42	□□□□□ -0.26
FXR1-208	ENST00000469882	TRMT44	Q8IYL2	757 aa	Known RBP	13.42	□□□□□ -0.26
FXR1-208	ENST00000469882	NPLOC4	Q8TAT6	608 aa		13.42	□□□□□ -0.26
FXR1-208	ENST00000469882	DIS3L	Q8TF46	1054 aa	Known RBP	13.42	□□□□□ -0.26
FXR1-208	ENST00000469882	ZNF287	Q9HBT7	754 aa		13.42	□□□□□ -0.26
FXR1-208	ENST00000469882	HMX1	Q9NP08	348 aa	Predicted RBP	13.42	□□□□□ -0.26
FXR1-208	ENST00000469882	HELLS	Q9NRZ9	838 aa		13.42	□□□□□ -0.26
FXR1-208	ENST00000469882	PPP1R9A	Q9ULJ8	1098 aa		13.42	□□□□□ -0.26
FXR1-208	ENST00000469882	ADAMTS5	Q9UNA0	930 aa		13.42	□□□□□ -0.26
FXR1-208	ENST00000469882	TACC3	Q9Y6A5	838 aa		13.42	□□□□□ -0.26
FXR1-208	ENST00000469882	IVNS1ABP	Q9Y6Y0	642 aa		13.42	□□□□□ -0.26
FXR1-208	ENST00000469882	ALPK3	Q96L96	1907 aa		13.42	□□□□□ -0.26
FXR1-208	ENST00000469882	HOXC6	P09630	235 aa		13.41	□□□□□ -0.26
FXR1-208	ENST00000469882	CCND3	P30281	292 aa	Predicted RBP	13.41	□□□□□ -0.26
FXR1-208	ENST00000469882	IRX6	P78412	446 aa	Predicted RBP	13.41	□□□□□ -0.26
FXR1-208	ENST00000469882	CTDSPL2	Q05D32	466 aa		13.41	□□□□□ -0.26
FXR1-208	ENST00000469882	PDE4B	Q07343	736 aa		13.41	□□□□□ -0.26
FXR1-208	ENST00000469882	NMI	Q13287	307 aa	Predicted RBP	13.41	□□□□□ -0.26
FXR1-208	ENST00000469882	PLS1	Q14651	629 aa		13.41	□□□□□ -0.26
FXR1-208	ENST00000469882	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.41	□□□□□ -0.26
FXR1-208	ENST00000469882	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.41	□□□□□ -0.26
FXR1-208	ENST00000469882	LRRC47	Q8N1G4	583 aa	Known RBP	13.41	□□□□□ -0.26
FXR1-208	ENST00000469882	SHCBP1	Q8NEM2	672 aa		13.41	□□□□□ -0.26
FXR1-208	ENST00000469882	REPS2	Q8NFH8	660 aa		13.41	□□□□□ -0.26
FXR1-208	ENST00000469882	INCENP	Q9NQS7	918 aa		13.41	□□□□□ -0.26
FXR1-208	ENST00000469882	MTMR4	Q9NYA4	1195 aa		13.41	□□□□□ -0.26
FXR1-208	ENST00000469882	CLIP2	Q9UDT6	1046 aa		13.41	□□□□□ -0.26
FXR1-208	ENST00000469882	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.41	□□□□□ -0.26
FXR1-208	ENST00000469882	TRIM6-TRIM34	B2RNG4	842 aa		13.4	□□□□□ -0.26
FXR1-208	ENST00000469882		F5H6K3	240 aa		13.4	□□□□□ -0.26
FXR1-208	ENST00000469882		H0YGN5	161 aa		13.4	□□□□□ -0.26
FXR1-208	ENST00000469882	VWA5A	O00534	786 aa		13.4	□□□□□ -0.26
FXR1-208	ENST00000469882	IGHA2	P01877	340 aa		13.4	□□□□□ -0.26
FXR1-208	ENST00000469882	SLC3A2	P08195	630 aa	Known RBP	13.4	□□□□□ -0.26
FXR1-208	ENST00000469882	ADORA2A	P29274	412 aa		13.4	□□□□□ -0.26
FXR1-208	ENST00000469882	MNX1	P50219	401 aa	Predicted RBP	13.4	□□□□□ -0.26
FXR1-208	ENST00000469882	TFAP4	Q01664	338 aa		13.4	□□□□□ -0.26
FXR1-208	ENST00000469882	KLRC3	Q07444	240 aa		13.4	□□□□□ -0.26
FXR1-208	ENST00000469882	MCMDC2	Q4G0Z9	681 aa		13.4	□□□□□ -0.26
FXR1-208	ENST00000469882	NCAPG2	Q86XI2	1143 aa		13.4	□□□□□ -0.26
FXR1-208	ENST00000469882	NEDD1	Q8NHV4	660 aa		13.4	□□□□□ -0.26
FXR1-208	ENST00000469882	RILPL2	Q969X0	211 aa		13.4	□□□□□ -0.26
FXR1-208	ENST00000469882	OSBPL3	Q9H4L5	887 aa		13.4	□□□□□ -0.26
FXR1-208	ENST00000469882	LAMA3	Q16787	3333 aa		13.39	□□□□□ -0.27
FXR1-208	ENST00000469882	SZT2	Q5T011	3432 aa		13.39	□□□□□ -0.27
FXR1-208	ENST00000469882	COBL	O75128	1261 aa		13.39	□□□□□ -0.27
FXR1-208	ENST00000469882	TTLL1	O95922	423 aa		13.39	□□□□□ -0.27
FXR1-208	ENST00000469882	TSPY3	P0CV98	308 aa		13.39	□□□□□ -0.27
FXR1-208	ENST00000469882	TSPY8	P0CW00	308 aa		13.39	□□□□□ -0.27
FXR1-208	ENST00000469882	ALX1	Q15699	326 aa		13.39	□□□□□ -0.27
FXR1-208	ENST00000469882	TICAM2	Q86XR7	235 aa		13.39	□□□□□ -0.27
FXR1-208	ENST00000469882	MKL1	Q969V6	931 aa		13.39	□□□□□ -0.27
FXR1-208	ENST00000469882	PAWR	Q96IZ0	340 aa	Known RBP	13.39	□□□□□ -0.27
FXR1-208	ENST00000469882	SLF1	Q9BQI6	1058 aa		13.39	□□□□□ -0.27
FXR1-208	ENST00000469882	MROH8	Q9H579	483 aa		13.39	□□□□□ -0.27
FXR1-208	ENST00000469882	ANAPC4	Q9UJX5	808 aa		13.39	□□□□□ -0.27
FXR1-208	ENST00000469882	ZNF214	Q9UL59	606 aa	Predicted RBP	13.39	□□□□□ -0.27
FXR1-208	ENST00000469882	OGDHL	Q9ULD0	1010 aa		13.39	□□□□□ -0.27
FXR1-208	ENST00000469882	LAMA4	Q16363	1823 aa		13.39	□□□□□ -0.27
FXR1-208	ENST00000469882	CCDC171	Q6TFL3	1326 aa		13.39	□□□□□ -0.27
FXR1-208	ENST00000469882	NMT2	O60551	498 aa		13.38	□□□□□ -0.27
FXR1-208	ENST00000469882	HSPD1	P10809	573 aa	Known RBP	13.38	□□□□□ -0.27
FXR1-208	ENST00000469882	CAPN2	P17655	700 aa		13.38	□□□□□ -0.27
FXR1-208	ENST00000469882	MFSD14C	Q5VZR4	134 aa		13.38	□□□□□ -0.27
FXR1-208	ENST00000469882	LHX8	Q68G74	356 aa		13.38	□□□□□ -0.27
FXR1-208	ENST00000469882	ANKLE1	Q8NAG6	615 aa		13.38	□□□□□ -0.27
FXR1-208	ENST00000469882	GMCL1P1	Q8NEA9	526 aa		13.38	□□□□□ -0.27
FXR1-208	ENST00000469882	TRPV1	Q8NER1	839 aa		13.38	□□□□□ -0.27
FXR1-208	ENST00000469882	DPF3	Q92784	378 aa		13.38	□□□□□ -0.27
FXR1-208	ENST00000469882	HTATIP2	Q9BUP3	242 aa		13.38	□□□□□ -0.27
FXR1-208	ENST00000469882	SYNPO2	Q9UMS6	1093 aa		13.38	□□□□□ -0.27
FXR1-208	ENST00000469882	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.38	□□□□□ -0.27
FXR1-208	ENST00000469882	PLXNA1	Q9UIW2	1896 aa		13.38	□□□□□ -0.27
FXR1-208	ENST00000469882	ZMYM6	O95789	1325 aa		13.38	□□□□□ -0.27
FXR1-208	ENST00000469882	STRN	O43815	780 aa		13.37	□□□□□ -0.27
FXR1-208	ENST00000469882	SLC25A27	O95847	323 aa		13.37	□□□□□ -0.27
FXR1-208	ENST00000469882	FGA	P02671	866 aa		13.37	□□□□□ -0.27
FXR1-208	ENST00000469882	SDS	P20132	328 aa		13.37	□□□□□ -0.27
FXR1-208	ENST00000469882	PDE4A	P27815	886 aa		13.37	□□□□□ -0.27
FXR1-208	ENST00000469882	CYP2C19	P33261	490 aa		13.37	□□□□□ -0.27
FXR1-208	ENST00000469882	DPP9	Q86TI2	863 aa		13.37	□□□□□ -0.27
FXR1-208	ENST00000469882	RIOX2	Q8IUF8	465 aa		13.37	□□□□□ -0.27
FXR1-208	ENST00000469882	ABRA	Q8N0Z2	381 aa		13.37	□□□□□ -0.27
FXR1-208	ENST00000469882	NBPF3	Q9H094	633 aa		13.37	□□□□□ -0.27
FXR1-208	ENST00000469882	IL17RB	Q9NRM6	502 aa		13.37	□□□□□ -0.27
FXR1-208	ENST00000469882	TSPY2	A6NKD2	308 aa		13.36	□□□□□ -0.27
FXR1-208	ENST00000469882	ORC4	O43929	436 aa		13.36	□□□□□ -0.27
FXR1-208	ENST00000469882	CYBA	P13498	195 aa		13.36	□□□□□ -0.27
FXR1-208	ENST00000469882	STAT3	P40763	770 aa		13.36	□□□□□ -0.27
FXR1-208	ENST00000469882	OLFML2B	Q68BL8	750 aa		13.36	□□□□□ -0.27
FXR1-208	ENST00000469882	SLFN13	Q68D06	897 aa		13.36	□□□□□ -0.27
FXR1-208	ENST00000469882	RASGRP2	Q7LDG7	609 aa		13.36	□□□□□ -0.27
FXR1-208	ENST00000469882	NECAB2	Q7Z6G3	386 aa		13.36	□□□□□ -0.27
FXR1-208	ENST00000469882	KIFC2	Q96AC6	838 aa		13.36	□□□□□ -0.27
FXR1-208	ENST00000469882	CHMP4C	Q96CF2	233 aa		13.36	□□□□□ -0.27
FXR1-208	ENST00000469882	MMP19	Q99542	508 aa		13.36	□□□□□ -0.27
FXR1-208	ENST00000469882	PFAS	O15067	1338 aa		13.36	□□□□□ -0.27
FXR1-208	ENST00000469882	RANBP6	O60518	1105 aa	Known RBP	13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms