RNA–Protein interactions for RNA: ENST00000468810.1

RPS27A-206, Transcript of ribosomal protein S27a, humanhuman

TSL 3

Gene RPS27A, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-206ENST00000468810 USP17L21D6R901 530 aa11.31□□□□□ -0.6
RPS27A-206ENST00000468810 MPHOSPH10O00566 681 aaKnown RBP11.31□□□□□ -0.6
RPS27A-206ENST00000468810 VCAM1P19320 739 aa11.31□□□□□ -0.6
RPS27A-206ENST00000468810 PTPREP23469 700 aa11.31□□□□□ -0.6
RPS27A-206ENST00000468810 C12orf60Q5U649 245 aa11.31□□□□□ -0.6
RPS27A-206ENST00000468810 CATSPERGQ6ZRH7 1159 aa11.31□□□□□ -0.6
RPS27A-206ENST00000468810 UBE2Q1Q7Z7E8 422 aa11.31□□□□□ -0.6
RPS27A-206ENST00000468810 GPRC5AQ8NFJ5 357 aa11.31□□□□□ -0.6
RPS27A-206ENST00000468810 PXYLP1Q8TE99 480 aa11.31□□□□□ -0.6
RPS27A-206ENST00000468810 WNT2BQ93097 391 aa11.31□□□□□ -0.6
RPS27A-206ENST00000468810 OSBP2Q969R2 916 aa11.31□□□□□ -0.6
RPS27A-206ENST00000468810 PAGR1Q9BTK6 254 aa11.31□□□□□ -0.6
RPS27A-206ENST00000468810 IRX2Q9BZI1 471 aaPredicted RBP11.31□□□□□ -0.6
RPS27A-206ENST00000468810 CABP5Q9NP86 173 aa11.31□□□□□ -0.6
RPS27A-206ENST00000468810 ATP8A2Q9NTI2 1148 aa11.31□□□□□ -0.6
RPS27A-206ENST00000468810 SLC4A4Q9Y6R1 1079 aa11.31□□□□□ -0.6
RPS27A-206ENST00000468810 A0A0G2JMZ2 1700 aa11.3□□□□□ -0.6
RPS27A-206ENST00000468810 USP17L15C9J2P7 530 aa11.3□□□□□ -0.6
RPS27A-206ENST00000468810 USP17L13C9JLJ4 530 aa11.3□□□□□ -0.6
RPS27A-206ENST00000468810 USP17L11C9JVI0 530 aa11.3□□□□□ -0.6
RPS27A-206ENST00000468810 USP17L18D6R9N7 530 aa11.3□□□□□ -0.6
RPS27A-206ENST00000468810 USP17L22D6RA61 530 aa11.3□□□□□ -0.6
RPS27A-206ENST00000468810 USP17L17D6RBQ6 530 aa11.3□□□□□ -0.6
RPS27A-206ENST00000468810 USP17L19D6RCP7 530 aa11.3□□□□□ -0.6
RPS27A-206ENST00000468810 USP17L20D6RJB6 530 aa11.3□□□□□ -0.6
RPS27A-206ENST00000468810 CYP2B6P20813 491 aa11.3□□□□□ -0.6
RPS27A-206ENST00000468810 CDK8P49336 464 aa11.3□□□□□ -0.6
RPS27A-206ENST00000468810 ERVK-9P63128 1117 aa11.3□□□□□ -0.6
RPS27A-206ENST00000468810 ERVK-24P63145 666 aa11.3□□□□□ -0.6
RPS27A-206ENST00000468810 UBXN2AP68543 259 aa11.3□□□□□ -0.6
RPS27A-206ENST00000468810 USP17L24Q0WX57 530 aa11.3□□□□□ -0.6
RPS27A-206ENST00000468810 CTR9Q6PD62 1173 aa11.3□□□□□ -0.6
RPS27A-206ENST00000468810 KBTBD3Q8NAB2 608 aa11.3□□□□□ -0.6
RPS27A-206ENST00000468810 U2AF1L4Q8WU68 220 aaKnown RBP11.3□□□□□ -0.6
RPS27A-206ENST00000468810 TRIB2Q92519 343 aa11.3□□□□□ -0.6
RPS27A-206ENST00000468810 STRBPQ96SI9 672 aaKnown RBP11.3□□□□□ -0.6
RPS27A-206ENST00000468810 ADAM33Q9BZ11 813 aa11.3□□□□□ -0.6
RPS27A-206ENST00000468810 RPAP3Q9H6T3 665 aaPredicted RBP11.3□□□□□ -0.6
RPS27A-206ENST00000468810 BTBD7Q9P203 1132 aa11.3□□□□□ -0.6
RPS27A-206ENST00000468810 FRMPD3Q5JV73 1810 aa11.3□□□□□ -0.6
RPS27A-206ENST00000468810 RANBP2P49792 3224 aaKnown RBP11.3□□□□□ -0.6
RPS27A-206ENST00000468810 DNAH12Q6ZR08 3092 aa11.29□□□□□ -0.6
RPS27A-206ENST00000468810 GSG1L2A8MUP6 293 aa11.29□□□□□ -0.6
RPS27A-206ENST00000468810 M0R2C6 588 aa11.29□□□□□ -0.6
RPS27A-206ENST00000468810 SGPL1O95470 568 aa11.29□□□□□ -0.6
RPS27A-206ENST00000468810 C16orf86Q6ZW13 317 aa11.29□□□□□ -0.6
RPS27A-206ENST00000468810 STK11IPQ8N1F8 1099 aa11.29□□□□□ -0.6
RPS27A-206ENST00000468810 PI4K2BQ8TCG2 481 aa11.29□□□□□ -0.6
RPS27A-206ENST00000468810 USP6NLQ92738 828 aa11.29□□□□□ -0.6
RPS27A-206ENST00000468810 DEFB118Q96PH6 123 aa11.29□□□□□ -0.6
RPS27A-206ENST00000468810 PAK6Q9NQU5 681 aaPredicted RBP11.29□□□□□ -0.6
RPS27A-206ENST00000468810 SMCHD1A6NHR9 2005 aa11.29□□□□□ -0.6
RPS27A-206ENST00000468810 SPDYE16A6NNV3 312 aaPredicted RBP11.28□□□□□ -0.6
RPS27A-206ENST00000468810 RNF113AO15541 343 aaKnown RBP11.28□□□□□ -0.6
RPS27A-206ENST00000468810 USP14P54578 494 aa11.28□□□□□ -0.6
RPS27A-206ENST00000468810 CCL14Q16627 93 aa11.28□□□□□ -0.6
RPS27A-206ENST00000468810 MORN1Q5T089 497 aa11.28□□□□□ -0.6
RPS27A-206ENST00000468810 TMEM179Q6ZVK1 233 aa11.28□□□□□ -0.6
RPS27A-206ENST00000468810 GPR142Q7Z601 462 aa11.28□□□□□ -0.6
RPS27A-206ENST00000468810 SEC62Q99442 399 aaKnown RBP11.28□□□□□ -0.6
RPS27A-206ENST00000468810 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.28□□□□□ -0.6
RPS27A-206ENST00000468810 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.28□□□□□ -0.61e-6■■□□□ 14.2
RPS27A-206ENST00000468810 EPB41L4AQ9HCS5 686 aaPredicted RBP11.28□□□□□ -0.6
RPS27A-206ENST00000468810 SWAP70Q9UH65 585 aa11.28□□□□□ -0.6
RPS27A-206ENST00000468810 RABGAP1Q9Y3P9 1069 aa11.28□□□□□ -0.6
RPS27A-206ENST00000468810 SALL3Q9BXA9 1300 aa11.28□□□□□ -0.6
RPS27A-206ENST00000468810 H0YGN5 161 aa11.27□□□□□ -0.61
RPS27A-206ENST00000468810 FARP2O94887 1054 aaPredicted RBP11.27□□□□□ -0.61
RPS27A-206ENST00000468810 HMGCRP04035 888 aa11.27□□□□□ -0.61
RPS27A-206ENST00000468810 ZSCAN25Q6NSZ9 544 aa11.27□□□□□ -0.61
RPS27A-206ENST00000468810 PLEKHH3Q7Z736 793 aa11.27□□□□□ -0.61
RPS27A-206ENST00000468810 SPICE1Q8N0Z3 855 aa11.27□□□□□ -0.61
RPS27A-206ENST00000468810 NKX2-3Q8TAU0 364 aa11.27□□□□□ -0.61
RPS27A-206ENST00000468810 DIS3LQ8TF46 1054 aaKnown RBP11.27□□□□□ -0.61
RPS27A-206ENST00000468810 APPBP2Q92624 585 aa11.27□□□□□ -0.61
RPS27A-206ENST00000468810 NUDT12Q9BQG2 462 aa11.27□□□□□ -0.61
RPS27A-206ENST00000468810 PLXNA1Q9UIW2 1896 aa11.27□□□□□ -0.61
RPS27A-206ENST00000468810 GPAA1O43292 621 aa11.26□□□□□ -0.61
RPS27A-206ENST00000468810 TFRCP02786 760 aaKnown RBP11.26□□□□□ -0.61
RPS27A-206ENST00000468810 EEF2P13639 858 aaKnown RBP11.26□□□□□ -0.61
RPS27A-206ENST00000468810 MAPK4P31152 587 aa11.26□□□□□ -0.61
RPS27A-206ENST00000468810 ICA1Q05084 483 aa11.26□□□□□ -0.61
RPS27A-206ENST00000468810 MAP3K21Q5TCX8 1036 aa11.26□□□□□ -0.61
RPS27A-206ENST00000468810 LBX2Q6XYB7 198 aa11.26□□□□□ -0.61
RPS27A-206ENST00000468810 GTF3C2Q8WUA4 911 aaPredicted RBP11.26□□□□□ -0.61
RPS27A-206ENST00000468810 GPATCH3Q96I76 525 aa11.26□□□□□ -0.61
RPS27A-206ENST00000468810 FLRT1Q9NZU1 646 aa11.26□□□□□ -0.61
RPS27A-206ENST00000468810 TMX2Q9Y320 296 aa11.26□□□□□ -0.61
RPS27A-206ENST00000468810 TTC41PQ6P2S7 1318 aa11.26□□□□□ -0.61
RPS27A-206ENST00000468810 MINDY4BA8MYZ0 360 aa11.25□□□□□ -0.61
RPS27A-206ENST00000468810 XRCC5P13010 732 aaKnown RBP11.25□□□□□ -0.61
RPS27A-206ENST00000468810 MX1P20591 662 aa11.25□□□□□ -0.61
RPS27A-206ENST00000468810 RASA1P20936 1047 aa11.25□□□□□ -0.61
RPS27A-206ENST00000468810 CACNB2Q08289 660 aaPredicted RBP11.25□□□□□ -0.61
RPS27A-206ENST00000468810 SBK1Q52WX2 424 aa11.25□□□□□ -0.61
RPS27A-206ENST00000468810 ANKRD45Q5TZF3 282 aa11.25□□□□□ -0.61
RPS27A-206ENST00000468810 WDR78Q5VTH9 848 aa11.25□□□□□ -0.61
RPS27A-206ENST00000468810 NPLOC4Q8TAT6 608 aa11.25□□□□□ -0.61
RPS27A-206ENST00000468810 SOCS4Q8WXH5 440 aa11.25□□□□□ -0.61
RPS27A-206ENST00000468810 DPF3Q92784 378 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms