RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 PPP1R9AQ9ULJ8 1098 aa17.99■□□□□ 0.47
ATG4B-215ENST00000468018 PLXNA1Q9UIW2 1896 aa17.99■□□□□ 0.47
ATG4B-215ENST00000468018 ELNP15502 786 aa17.98■□□□□ 0.47
ATG4B-215ENST00000468018 FAM83BQ5T0W9 1011 aa17.98■□□□□ 0.47
ATG4B-215ENST00000468018 CENPQQ7L2Z9 268 aaPredicted RBP17.98■□□□□ 0.47
ATG4B-215ENST00000468018 PLEKHH3Q7Z736 793 aa17.98■□□□□ 0.47
ATG4B-215ENST00000468018 TBC1D10CQ8IV04 446 aa17.98■□□□□ 0.47
ATG4B-215ENST00000468018 SHCBP1Q8NEM2 672 aa17.98■□□□□ 0.47
ATG4B-215ENST00000468018 STAG1Q8WVM7 1258 aa17.98■□□□□ 0.47
ATG4B-215ENST00000468018 NUDT12Q9BQG2 462 aa17.98■□□□□ 0.47
ATG4B-215ENST00000468018 TMEM106CQ9BVX2 250 aa17.98■□□□□ 0.47
ATG4B-215ENST00000468018 SPATC1LQ9H0A9 340 aa17.98■□□□□ 0.47
ATG4B-215ENST00000468018 TCP11L1Q9NUJ3 509 aa17.98■□□□□ 0.47
ATG4B-215ENST00000468018 FBXO28Q9NVF7 368 aa17.98■□□□□ 0.47
ATG4B-215ENST00000468018 FRMPD3Q5JV73 1810 aa17.98■□□□□ 0.47
ATG4B-215ENST00000468018 TSPY2A6NKD2 308 aa17.97■□□□□ 0.47
ATG4B-215ENST00000468018 INHAP05111 366 aa17.97■□□□□ 0.47
ATG4B-215ENST00000468018 CHMLP26374 656 aa17.97■□□□□ 0.47
ATG4B-215ENST00000468018 UBXN2AP68543 259 aa17.97■□□□□ 0.47
ATG4B-215ENST00000468018 GRB14Q14449 540 aa17.97■□□□□ 0.47
ATG4B-215ENST00000468018 PPP4R3BQ5MIZ7 849 aa17.97■□□□□ 0.47
ATG4B-215ENST00000468018 AKNAD1Q5T1N1 836 aa17.97■□□□□ 0.47
ATG4B-215ENST00000468018 NKX2-3Q8TAU0 364 aa17.97■□□□□ 0.47
ATG4B-215ENST00000468018 MOV10L1Q9BXT6 1211 aaKnown RBP17.97■□□□□ 0.47
ATG4B-215ENST00000468018 NMT2O60551 498 aa17.96■□□□□ 0.47
ATG4B-215ENST00000468018 IGHA2P01877 340 aa17.96■□□□□ 0.47
ATG4B-215ENST00000468018 HMGCRP04035 888 aa17.96■□□□□ 0.47
ATG4B-215ENST00000468018 EN2P19622 333 aaPredicted RBP17.96■□□□□ 0.47
ATG4B-215ENST00000468018 PTPREP23469 700 aa17.96■□□□□ 0.47
ATG4B-215ENST00000468018 HAND2P61296 217 aa17.96■□□□□ 0.47
ATG4B-215ENST00000468018 TMEM132BQ14DG7 1078 aa17.96■□□□□ 0.47
ATG4B-215ENST00000468018 LRRC47Q8N1G4 583 aaKnown RBP17.96■□□□□ 0.47
ATG4B-215ENST00000468018 TRIB2Q92519 343 aa17.96■□□□□ 0.47
ATG4B-215ENST00000468018 SHISA4Q96DD7 197 aa17.96■□□□□ 0.47
ATG4B-215ENST00000468018 NUP88Q99567 741 aaPredicted RBP17.96■□□□□ 0.47
ATG4B-215ENST00000468018 ZNF214Q9UL59 606 aaPredicted RBP17.96■□□□□ 0.47
ATG4B-215ENST00000468018 SMCHD1A6NHR9 2005 aa17.96■□□□□ 0.47
ATG4B-215ENST00000468018 SLC15A5A6NIM6 579 aa17.95■□□□□ 0.46
ATG4B-215ENST00000468018 VWA5AO00534 786 aa17.95■□□□□ 0.46
ATG4B-215ENST00000468018 RANBP6O60518 1105 aaKnown RBP17.95■□□□□ 0.46
ATG4B-215ENST00000468018 GJB1P08034 283 aa17.95■□□□□ 0.46
ATG4B-215ENST00000468018 HOXC6P09630 235 aa17.95■□□□□ 0.46
ATG4B-215ENST00000468018 CCL5P13501 91 aa17.95■□□□□ 0.46
ATG4B-215ENST00000468018 CYP2B6P20813 491 aa17.95■□□□□ 0.46
ATG4B-215ENST00000468018 NT5C2P49902 561 aa17.95■□□□□ 0.46
ATG4B-215ENST00000468018 MAP3K21Q5TCX8 1036 aa17.95■□□□□ 0.46
ATG4B-215ENST00000468018 SLF1Q9BQI6 1058 aa17.95■□□□□ 0.46
ATG4B-215ENST00000468018 PAK6Q9NQU5 681 aaPredicted RBP17.95■□□□□ 0.46
ATG4B-215ENST00000468018 NEDD4P46934 1319 aa17.95■□□□□ 0.46
ATG4B-215ENST00000468018 ERCC3P19447 782 aa17.94■□□□□ 0.46
ATG4B-215ENST00000468018 RGS2P41220 211 aa17.94■□□□□ 0.46
ATG4B-215ENST00000468018 GJA8P48165 433 aa17.94■□□□□ 0.46
ATG4B-215ENST00000468018 MAP2K5Q13163 448 aa17.94■□□□□ 0.46
ATG4B-215ENST00000468018 SLFN13Q68D06 897 aa17.94■□□□□ 0.46
ATG4B-215ENST00000468018 MFSD6Q6ZSS7 791 aa17.94■□□□□ 0.46
ATG4B-215ENST00000468018 RIOX2Q8IUF8 465 aa17.94■□□□□ 0.46
ATG4B-215ENST00000468018 GMCL1Q96IK5 515 aa17.94■□□□□ 0.46
ATG4B-215ENST00000468018 APBA2Q99767 749 aa17.94■□□□□ 0.46
ATG4B-215ENST00000468018 UNC93B1Q9H1C4 597 aa17.94■□□□□ 0.46
ATG4B-215ENST00000468018 ZNF213O14771 459 aa17.93■□□□□ 0.46
ATG4B-215ENST00000468018 ATP2A1O14983 1001 aa17.93■□□□□ 0.46
ATG4B-215ENST00000468018 STRNO43815 780 aa17.93■□□□□ 0.46
ATG4B-215ENST00000468018 PLA2G6O60733 806 aa17.93■□□□□ 0.46
ATG4B-215ENST00000468018 MYCP01106 439 aaPredicted RBP17.93■□□□□ 0.46
ATG4B-215ENST00000468018 RCSD1Q6JBY9 416 aa17.93■□□□□ 0.46
ATG4B-215ENST00000468018 CCAR1Q8IX12 1150 aaKnown RBP17.93■□□□□ 0.46
ATG4B-215ENST00000468018 TRMT44Q8IYL2 757 aaKnown RBP17.93■□□□□ 0.46
ATG4B-215ENST00000468018 ABRAQ8N0Z2 381 aa17.93■□□□□ 0.46
ATG4B-215ENST00000468018 RNF208Q9H0X6 261 aa17.93■□□□□ 0.46
ATG4B-215ENST00000468018 RNF41Q9H4P4 317 aaPredicted RBP17.93■□□□□ 0.46
ATG4B-215ENST00000468018 MROH8Q9H579 483 aa17.93■□□□□ 0.46
ATG4B-215ENST00000468018 STX8Q9UNK0 236 aa17.93■□□□□ 0.46
ATG4B-215ENST00000468018 SGSM2O43147 1006 aa17.92■□□□□ 0.46
ATG4B-215ENST00000468018 RAD21O60216 631 aa17.92■□□□□ 0.46
ATG4B-215ENST00000468018 SLC25A27O95847 323 aa17.92■□□□□ 0.46
ATG4B-215ENST00000468018 BMP3P12645 472 aa17.92■□□□□ 0.46
ATG4B-215ENST00000468018 TRIM32Q13049 653 aa17.92■□□□□ 0.46
ATG4B-215ENST00000468018 PRPF38AQ8NAV1 312 aaKnown RBP17.92■□□□□ 0.46
ATG4B-215ENST00000468018 RUFY2Q8WXA3 655 aa17.92■□□□□ 0.46
ATG4B-215ENST00000468018 BIN2Q9UBW5 565 aaPredicted RBP17.92■□□□□ 0.46
ATG4B-215ENST00000468018 FEM1BQ9UK73 627 aa17.92■□□□□ 0.46
ATG4B-215ENST00000468018 CCL14Q16627 93 aa17.91■□□□□ 0.46
ATG4B-215ENST00000468018 RRP12Q5JTH9 1297 aaKnown RBP17.91■□□□□ 0.46
ATG4B-215ENST00000468018 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.91■□□□□ 0.46
ATG4B-215ENST00000468018 UBE2Q1Q7Z7E8 422 aa17.91■□□□□ 0.46
ATG4B-215ENST00000468018 NPLOC4Q8TAT6 608 aa17.91■□□□□ 0.46
ATG4B-215ENST00000468018 TTC14Q96N46 770 aa17.91■□□□□ 0.46
ATG4B-215ENST00000468018 CRISPLD2Q9H0B8 497 aa17.91■□□□□ 0.46
ATG4B-215ENST00000468018 SLC38A10Q9HBR0 1119 aa17.91■□□□□ 0.46
ATG4B-215ENST00000468018 FLRT1Q9NZU1 646 aa17.91■□□□□ 0.46
ATG4B-215ENST00000468018 CTNNA3Q9UI47 895 aa17.91■□□□□ 0.46
ATG4B-215ENST00000468018 IVNS1ABPQ9Y6Y0 642 aa17.91■□□□□ 0.46
ATG4B-215ENST00000468018 RPTORQ8N122 1335 aa17.91■□□□□ 0.46
ATG4B-215ENST00000468018 SGPL1O95470 568 aa17.9■□□□□ 0.46
ATG4B-215ENST00000468018 CAPN2P17655 700 aa17.9■□□□□ 0.46
ATG4B-215ENST00000468018 STAT3P40763 770 aa17.9■□□□□ 0.46
ATG4B-215ENST00000468018 PTH1RQ03431 593 aa17.9■□□□□ 0.46
ATG4B-215ENST00000468018 IMMTQ16891 758 aaKnown RBP17.9■□□□□ 0.46
ATG4B-215ENST00000468018 BMP2KLQ5H9B9 411 aa17.9■□□□□ 0.46
ATG4B-215ENST00000468018 RASGRP2Q7LDG7 609 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms