RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-231ENST00000467435 GPKOWQ92917 476 aaPredicted RBP eCLIP14.16□□□□□ -0.14
HDLBP-231ENST00000467435 CPVLQ9H3G5 476 aa14.16□□□□□ -0.14
HDLBP-231ENST00000467435 KANSL2Q9H9L4 492 aa14.16□□□□□ -0.14
HDLBP-231ENST00000467435 SH3GLB2Q9NR46 395 aa14.16□□□□□ -0.14
HDLBP-231ENST00000467435 NYAP2Q9P242 653 aa14.16□□□□□ -0.14
HDLBP-231ENST00000467435 DOCK1Q14185 1865 aa14.15□□□□□ -0.14
HDLBP-231ENST00000467435 EEF2P13639 858 aaKnown RBP14.15□□□□□ -0.14
HDLBP-231ENST00000467435 ZNF543Q08ER8 600 aa14.15□□□□□ -0.14
HDLBP-231ENST00000467435 CCDC96Q2M329 555 aa14.15□□□□□ -0.14
HDLBP-231ENST00000467435 RILPL1Q5EBL4 403 aa14.15□□□□□ -0.14
HDLBP-231ENST00000467435 WWC2Q6AWC2 1192 aa14.15□□□□□ -0.14
HDLBP-231ENST00000467435 HEATR3Q7Z4Q2 680 aa14.15□□□□□ -0.14
HDLBP-231ENST00000467435 CCDC148Q8NFR7 591 aa14.15□□□□□ -0.14
HDLBP-231ENST00000467435 RRP36Q96EU6 259 aaKnown RBP14.15□□□□□ -0.14
HDLBP-231ENST00000467435 TMEM39BQ9GZU3 492 aa14.15□□□□□ -0.14
HDLBP-231ENST00000467435 CABP5Q9NP86 173 aa14.15□□□□□ -0.14
HDLBP-231ENST00000467435 SEC63Q9UGP8 760 aaKnown RBP14.15□□□□□ -0.14
HDLBP-231ENST00000467435 STXBP3O00186 592 aa14.14□□□□□ -0.15
HDLBP-231ENST00000467435 EGFRP00533 1210 aa14.14□□□□□ -0.15
HDLBP-231ENST00000467435 GH2P01242 217 aa14.14□□□□□ -0.15
HDLBP-231ENST00000467435 LMNB1P20700 586 aa14.14□□□□□ -0.15
HDLBP-231ENST00000467435 CALML3P27482 149 aa14.14□□□□□ -0.15
HDLBP-231ENST00000467435 TNFAIP1Q13829 316 aa14.14□□□□□ -0.15
HDLBP-231ENST00000467435 RRP1BQ14684 758 aaKnown RBP14.14□□□□□ -0.15
HDLBP-231ENST00000467435 NPY5RQ15761 445 aa14.14□□□□□ -0.15
HDLBP-231ENST00000467435 KIF4BQ2VIQ3 1234 aa14.14□□□□□ -0.15
HDLBP-231ENST00000467435 LRSAM1Q6UWE0 723 aa14.14□□□□□ -0.15
HDLBP-231ENST00000467435 GAS2L3Q86XJ1 694 aa14.14□□□□□ -0.15
HDLBP-231ENST00000467435 HOMER1Q86YM7 354 aa14.14□□□□□ -0.15
HDLBP-231ENST00000467435 CDAN1Q8IWY9 1227 aa14.14□□□□□ -0.15
HDLBP-231ENST00000467435 CCAR1Q8IX12 1150 aaKnown RBP14.14□□□□□ -0.15
HDLBP-231ENST00000467435 TNFRSF25Q93038 417 aa14.14□□□□□ -0.15
HDLBP-231ENST00000467435 MKL1Q969V6 931 aa14.14□□□□□ -0.15
HDLBP-231ENST00000467435 NUP62CLQ9H1M0 184 aa14.14□□□□□ -0.15
HDLBP-231ENST00000467435 GPCPD1Q9NPB8 672 aa14.14□□□□□ -0.15
HDLBP-231ENST00000467435 DDX19AQ9NUU7 478 aaKnown RBP14.14□□□□□ -0.15
HDLBP-231ENST00000467435 CNOT7Q9UIV1 285 aaKnown RBP14.14□□□□□ -0.15
HDLBP-231ENST00000467435 PCDHA7Q9UN72 937 aa14.14□□□□□ -0.15
HDLBP-231ENST00000467435 A0A1W2PQ27 194 aa14.13□□□□□ -0.15
HDLBP-231ENST00000467435 A0A1W2PQ64 194 aa14.13□□□□□ -0.15
HDLBP-231ENST00000467435 A0A1W2PQD8 194 aa14.13□□□□□ -0.15
HDLBP-231ENST00000467435 FAM205CA6NFA0 338 aa14.13□□□□□ -0.15
HDLBP-231ENST00000467435 PPP6R2O75170 966 aa14.13□□□□□ -0.15
HDLBP-231ENST00000467435 LETM1O95202 739 aaPredicted RBP14.13□□□□□ -0.15
HDLBP-231ENST00000467435 VEGFAP15692 232 aaPredicted RBP14.13□□□□□ -0.15
HDLBP-231ENST00000467435 TOB1P50616 345 aaPredicted RBP14.13□□□□□ -0.15
HDLBP-231ENST00000467435 SLC39A14Q15043 492 aa14.13□□□□□ -0.15
HDLBP-231ENST00000467435 PTPAQ15257 358 aa14.13□□□□□ -0.15
HDLBP-231ENST00000467435 TBC1D10BQ4KMP7 808 aaPredicted RBP14.13□□□□□ -0.15
HDLBP-231ENST00000467435 GPATCH4Q5T3I0 446 aaKnown RBP14.13□□□□□ -0.15
HDLBP-231ENST00000467435 ADALQ6DHV7 355 aa14.13□□□□□ -0.15
HDLBP-231ENST00000467435 CCDC73Q6ZRK6 1079 aa14.13□□□□□ -0.15
HDLBP-231ENST00000467435 SAMD7Q7Z3H4 446 aa14.13□□□□□ -0.15
HDLBP-231ENST00000467435 FAM177A1Q8N128 213 aaPredicted RBP14.13□□□□□ -0.15
HDLBP-231ENST00000467435 JMYQ8N9B5 988 aa14.13□□□□□ -0.15
HDLBP-231ENST00000467435 FSIP1Q8NA03 581 aa14.13□□□□□ -0.15
HDLBP-231ENST00000467435 DCAF4Q8WV16 495 aa14.13□□□□□ -0.15
HDLBP-231ENST00000467435 MRPS27Q92552 414 aaKnown RBP14.13□□□□□ -0.15
HDLBP-231ENST00000467435 PIGSQ96S52 555 aa14.13□□□□□ -0.15
HDLBP-231ENST00000467435 UBA5Q9GZZ9 404 aa14.13□□□□□ -0.15
HDLBP-231ENST00000467435 RIOX1Q9H6W3 641 aa14.13□□□□□ -0.15
HDLBP-231ENST00000467435 BARHL2Q9NY43 387 aa14.13□□□□□ -0.15
HDLBP-231ENST00000467435 DACT1Q9NYF0 836 aa14.13□□□□□ -0.15
HDLBP-231ENST00000467435 PGAP2Q9UHJ9 254 aa14.13□□□□□ -0.15
HDLBP-231ENST00000467435 NOL7Q9UMY1 257 aaKnown RBP14.13□□□□□ -0.15
HDLBP-231ENST00000467435 hCG_1984214I3L0E3 225 aa14.12□□□□□ -0.15
HDLBP-231ENST00000467435 RAD21O60216 631 aa14.12□□□□□ -0.15
HDLBP-231ENST00000467435 TBC1D12O60347 775 aa14.12□□□□□ -0.15
HDLBP-231ENST00000467435 JAG1P78504 1218 aa14.12□□□□□ -0.15
HDLBP-231ENST00000467435 RASA3Q14644 834 aa14.12□□□□□ -0.15
HDLBP-231ENST00000467435 EARS2Q5JPH6 523 aaKnown RBP14.12□□□□□ -0.15
HDLBP-231ENST00000467435 SLFN13Q68D06 897 aa14.12□□□□□ -0.15
HDLBP-231ENST00000467435 TYW1BQ6NUM6 668 aa14.12□□□□□ -0.15
HDLBP-231ENST00000467435 BLIDQ8IZY5 108 aa14.12□□□□□ -0.15
HDLBP-231ENST00000467435 ZNF713Q8N859 430 aaPredicted RBP14.12□□□□□ -0.15
HDLBP-231ENST00000467435 DAGLBQ8NCG7 672 aa14.12□□□□□ -0.15
HDLBP-231ENST00000467435 CCDC12Q8WUD4 166 aaPredicted RBP14.12□□□□□ -0.15
HDLBP-231ENST00000467435 GOLPH3LQ9H4A5 285 aa14.12□□□□□ -0.15
HDLBP-231ENST00000467435 GRPEL1Q9HAV7 217 aa14.12□□□□□ -0.15
HDLBP-231ENST00000467435 VAT1LQ9HCJ6 419 aa14.12□□□□□ -0.15
HDLBP-231ENST00000467435 ZBTB21Q9ULJ3 1066 aa14.12□□□□□ -0.15
HDLBP-231ENST00000467435 PCDHA4Q9UN74 947 aa14.12□□□□□ -0.15
HDLBP-231ENST00000467435 H7C1D1 291 aa14.11□□□□□ -0.15
HDLBP-231ENST00000467435 NR1I2O75469 434 aa14.11□□□□□ -0.15
HDLBP-231ENST00000467435 MARCKSP29966 332 aaPredicted RBP14.11□□□□□ -0.15
HDLBP-231ENST00000467435 MRE11P49959 708 aa14.11□□□□□ -0.15
HDLBP-231ENST00000467435 NAPAP54920 295 aa14.11□□□□□ -0.15
HDLBP-231ENST00000467435 GALNT17Q6IS24 598 aa14.11□□□□□ -0.15
HDLBP-231ENST00000467435 KCTD1Q719H9 257 aa14.11□□□□□ -0.15
HDLBP-231ENST00000467435 MIGA2Q7L4E1 593 aa14.11□□□□□ -0.15
HDLBP-231ENST00000467435 SIAH1Q8IUQ4 282 aa14.11□□□□□ -0.15
HDLBP-231ENST00000467435 GPC2Q8N158 579 aa14.11□□□□□ -0.15
HDLBP-231ENST00000467435 GMCL1P1Q8NEA9 526 aa14.11□□□□□ -0.15
HDLBP-231ENST00000467435 SYT17Q9BSW7 474 aa14.11□□□□□ -0.15
HDLBP-231ENST00000467435 TSPY26PQ9H489 355 aa14.11□□□□□ -0.15
HDLBP-231ENST00000467435 CLSTN2Q9H4D0 955 aa14.11□□□□□ -0.15
HDLBP-231ENST00000467435 ARHGEF10LQ9HCE6 1279 aa14.11□□□□□ -0.15
HDLBP-231ENST00000467435 HACL1Q9UJ83 578 aa14.11□□□□□ -0.15
HDLBP-231ENST00000467435 SYNPO2Q9UMS6 1093 aa14.11□□□□□ -0.15
HDLBP-231ENST00000467435 CEP131Q9UPN4 1083 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms