RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 FBXO28Q9NVF7 368 aa13.01□□□□□ -0.33
MSH5-212ENST00000467319 RBPJLQ9UBG7 517 aa13.01□□□□□ -0.33
MSH5-212ENST00000467319 ADAMTS5Q9UNA0 930 aa13.01□□□□□ -0.33
MSH5-212ENST00000467319 FLOT1O75955 427 aa13□□□□□ -0.33
MSH5-212ENST00000467319 DSG3P32926 999 aa13□□□□□ -0.33
MSH5-212ENST00000467319 HSPA4P34932 840 aa13□□□□□ -0.33
MSH5-212ENST00000467319 ERVK-9P63128 1117 aa13□□□□□ -0.33
MSH5-212ENST00000467319 ERVK-24P63145 666 aa13□□□□□ -0.33
MSH5-212ENST00000467319 TRDNQ13061 729 aa13□□□□□ -0.33
MSH5-212ENST00000467319 COG2Q14746 738 aa13□□□□□ -0.33
MSH5-212ENST00000467319 RNF20Q5VTR2 975 aa13□□□□□ -0.33
MSH5-212ENST00000467319 SLFN13Q68D06 897 aa13□□□□□ -0.33
MSH5-212ENST00000467319 OTOP1Q7RTM1 612 aa13□□□□□ -0.33
MSH5-212ENST00000467319 RASEFQ8IZ41 740 aa13□□□□□ -0.33
MSH5-212ENST00000467319 MB21D1Q8N884 522 aa13□□□□□ -0.33
MSH5-212ENST00000467319 REPS2Q8NFH8 660 aa13□□□□□ -0.33
MSH5-212ENST00000467319 DCAF4Q8WV16 495 aa13□□□□□ -0.33
MSH5-212ENST00000467319 ATG4CQ96DT6 458 aa13□□□□□ -0.33
MSH5-212ENST00000467319 TRIM47Q96LD4 638 aa13□□□□□ -0.33
MSH5-212ENST00000467319 ZKSCAN3Q9BRR0 538 aa13□□□□□ -0.33
MSH5-212ENST00000467319 UBAC1Q9BSL1 405 aa13□□□□□ -0.33
MSH5-212ENST00000467319 BTBD7Q9P203 1132 aa13□□□□□ -0.33
MSH5-212ENST00000467319 PPP1R9AQ9ULJ8 1098 aa13□□□□□ -0.33
MSH5-212ENST00000467319 RABGAP1Q9Y3P9 1069 aa13□□□□□ -0.33
MSH5-212ENST00000467319 CENPFP49454 3210 aa13□□□□□ -0.33
MSH5-212ENST00000467319 PLXNB2O15031 1838 aa12.99□□□□□ -0.33
MSH5-212ENST00000467319 PEX10O60683 326 aa12.99□□□□□ -0.33
MSH5-212ENST00000467319 PLA2G6O60733 806 aa12.99□□□□□ -0.33
MSH5-212ENST00000467319 PDHBP11177 359 aa12.99□□□□□ -0.33
MSH5-212ENST00000467319 SLF1Q9BQI6 1058 aa12.99□□□□□ -0.33
MSH5-212ENST00000467319 MTA3Q9BTC8 594 aa12.99□□□□□ -0.33
MSH5-212ENST00000467319 WDR19Q8NEZ3 1342 aa12.98□□□□□ -0.33
MSH5-212ENST00000467319 GNRH1P01148 92 aa12.98□□□□□ -0.33
MSH5-212ENST00000467319 BMP3P12645 472 aa12.98□□□□□ -0.33
MSH5-212ENST00000467319 SLC1A4P43007 532 aa12.98□□□□□ -0.33
MSH5-212ENST00000467319 PNMA1Q8ND90 353 aa12.98□□□□□ -0.33
MSH5-212ENST00000467319 GPRC5AQ8NFJ5 357 aa12.98□□□□□ -0.33
MSH5-212ENST00000467319 PAGR1Q9BTK6 254 aa12.98□□□□□ -0.33
MSH5-212ENST00000467319 HOXC10Q9NYD6 342 aa12.98□□□□□ -0.33
MSH5-212ENST00000467319 FEM1BQ9UK73 627 aa12.98□□□□□ -0.33
MSH5-212ENST00000467319 ZNF214Q9UL59 606 aaPredicted RBP12.98□□□□□ -0.33
MSH5-212ENST00000467319 GTF3C3Q9Y5Q9 886 aa12.98□□□□□ -0.33
MSH5-212ENST00000467319 VWA5AO00534 786 aa12.97□□□□□ -0.33
MSH5-212ENST00000467319 PRC1O43663 620 aa12.97□□□□□ -0.33
MSH5-212ENST00000467319 RAD21O60216 631 aa12.97□□□□□ -0.33
MSH5-212ENST00000467319 MCCP23508 829 aa12.97□□□□□ -0.33
MSH5-212ENST00000467319 PSMC4P43686 418 aa12.97□□□□□ -0.33
MSH5-212ENST00000467319 STAT2P52630 851 aa12.97□□□□□ -0.33
MSH5-212ENST00000467319 FCGRTP55899 365 aa12.97□□□□□ -0.33
MSH5-212ENST00000467319 ZNF543Q08ER8 600 aa12.97□□□□□ -0.33
MSH5-212ENST00000467319 ADCK5Q3MIX3 580 aa12.97□□□□□ -0.33
MSH5-212ENST00000467319 IGDCC4Q8TDY8 1250 aa12.97□□□□□ -0.33
MSH5-212ENST00000467319 USP26Q9BXU7 913 aa12.97□□□□□ -0.33
MSH5-212ENST00000467319 PORCNQ9H237 461 aa12.97□□□□□ -0.33
MSH5-212ENST00000467319 EFCC1Q9HA90 598 aa12.97□□□□□ -0.33
MSH5-212ENST00000467319 LY9Q9HBG7 655 aa12.97□□□□□ -0.33
MSH5-212ENST00000467319 SENP2Q9HC62 589 aa12.97□□□□□ -0.33
MSH5-212ENST00000467319 TRIM17Q9Y577 477 aa12.97□□□□□ -0.33
MSH5-212ENST00000467319 SNX14Q9Y5W7 946 aa12.97□□□□□ -0.33
MSH5-212ENST00000467319 SH2B2O14492 632 aaPredicted RBP12.96□□□□□ -0.33
MSH5-212ENST00000467319 ATP2A1O14983 1001 aa12.96□□□□□ -0.33
MSH5-212ENST00000467319 ZKSCAN1P17029 563 aaPredicted RBP12.96□□□□□ -0.33
MSH5-212ENST00000467319 MCM5P33992 734 aa12.96□□□□□ -0.33
MSH5-212ENST00000467319 KRT32Q14532 448 aa12.96□□□□□ -0.33
MSH5-212ENST00000467319 KIF22Q14807 665 aa12.96□□□□□ -0.33
MSH5-212ENST00000467319 TMEM132BQ14DG7 1078 aa12.96□□□□□ -0.33
MSH5-212ENST00000467319 SART3Q15020 963 aaKnown RBP12.96□□□□□ -0.33
MSH5-212ENST00000467319 PKN2Q16513 984 aaKnown RBP12.96□□□□□ -0.33
MSH5-212ENST00000467319 C8orf34Q49A92 452 aa12.96□□□□□ -0.33
MSH5-212ENST00000467319 IFIT1BQ5T764 474 aaKnown RBP12.96□□□□□ -0.33
MSH5-212ENST00000467319 BTNL9Q6UXG8 535 aa12.96□□□□□ -0.33
MSH5-212ENST00000467319 KCTD1Q719H9 257 aa12.96□□□□□ -0.33
MSH5-212ENST00000467319 FAM160B2Q86V87 743 aa12.96□□□□□ -0.33
MSH5-212ENST00000467319 PRPF38AQ8NAV1 312 aaKnown RBP12.96□□□□□ -0.33
MSH5-212ENST00000467319 SHCBP1Q8NEM2 672 aa12.96□□□□□ -0.33
MSH5-212ENST00000467319 IL17RAQ96F46 866 aa12.96□□□□□ -0.33
MSH5-212ENST00000467319 MOV10L1Q9BXT6 1211 aaKnown RBP12.96□□□□□ -0.33
MSH5-212ENST00000467319 MCOLN1Q9GZU1 580 aa12.96□□□□□ -0.33
MSH5-212ENST00000467319 SPATC1LQ9H0A9 340 aa12.96□□□□□ -0.33
MSH5-212ENST00000467319 KAT14Q9H8E8 782 aa12.96□□□□□ -0.33
MSH5-212ENST00000467319 SLC38A10Q9HBR0 1119 aa12.96□□□□□ -0.33
MSH5-212ENST00000467319 TMEM232C9JQI7 657 aa12.95□□□□□ -0.34
MSH5-212ENST00000467319 TNPO2O14787 897 aaKnown RBP12.95□□□□□ -0.34
MSH5-212ENST00000467319 IFIT3O14879 490 aaKnown RBP12.95□□□□□ -0.34
MSH5-212ENST00000467319 MAPK4P31152 587 aa12.95□□□□□ -0.34
MSH5-212ENST00000467319 PRMT2P55345 433 aa12.95□□□□□ -0.34
MSH5-212ENST00000467319 EXOSC10Q01780 885 aaKnown RBP12.95□□□□□ -0.34
MSH5-212ENST00000467319 ARHGEF6Q15052 776 aa12.95□□□□□ -0.34
MSH5-212ENST00000467319 CCDC96Q2M329 555 aa12.95□□□□□ -0.34
MSH5-212ENST00000467319 Q3C1V9 767 aa12.95□□□□□ -0.34
MSH5-212ENST00000467319 ASPRV1Q53RT3 343 aa12.95□□□□□ -0.34
MSH5-212ENST00000467319 TMEM67Q5HYA8 995 aa12.95□□□□□ -0.34
MSH5-212ENST00000467319 GPATCH4Q5T3I0 446 aaKnown RBP12.95□□□□□ -0.34
MSH5-212ENST00000467319 FBXO46Q6PJ61 603 aaPredicted RBP12.95□□□□□ -0.34
MSH5-212ENST00000467319 CHST3Q7LGC8 479 aa12.95□□□□□ -0.34
MSH5-212ENST00000467319 TMEM87BQ96K49 555 aa12.95□□□□□ -0.34
MSH5-212ENST00000467319 NEK1Q96PY6 1258 aa12.95□□□□□ -0.34
MSH5-212ENST00000467319 GPHNQ9NQX3 736 aaPredicted RBP12.95□□□□□ -0.34
MSH5-212ENST00000467319 SRRDQ9UH36 339 aa12.95□□□□□ -0.34
MSH5-212ENST00000467319 PTPN22Q9Y2R2 807 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms