RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 WDR24Q96S15 920 aa11.82□□□□□ -0.52
UFD1-206ENST00000466373 IRX2Q9BZI1 471 aaPredicted RBP11.82□□□□□ -0.52
UFD1-206ENST00000466373 A0A1B0GTH6 734 aa11.81□□□□□ -0.52
UFD1-206ENST00000466373 PP2D1A8MPX8 630 aa11.81□□□□□ -0.52
UFD1-206ENST00000466373 ZSCAN20P17040 1043 aaPredicted RBP11.81□□□□□ -0.52
UFD1-206ENST00000466373 RBL2Q08999 1139 aa11.81□□□□□ -0.52
UFD1-206ENST00000466373 SBK1Q52WX2 424 aa11.81□□□□□ -0.52
UFD1-206ENST00000466373 C12orf60Q5U649 245 aa11.81□□□□□ -0.52
UFD1-206ENST00000466373 RRAGBQ5VZM2 374 aa11.81□□□□□ -0.52
UFD1-206ENST00000466373 APTXQ7Z2E3 356 aaKnown RBP11.81□□□□□ -0.52
UFD1-206ENST00000466373 SMAP1Q8IYB5 467 aaPredicted RBP11.81□□□□□ -0.52
UFD1-206ENST00000466373 IGSF22Q8N9C0 903 aa11.81□□□□□ -0.52
UFD1-206ENST00000466373 RASSF8Q8NHQ8 419 aa11.81□□□□□ -0.52
UFD1-206ENST00000466373 GSDMAQ96QA5 445 aa11.81□□□□□ -0.52
UFD1-206ENST00000466373 A0A0U1RQJ8 604 aa11.81□□□□□ -0.52
UFD1-206ENST00000466373 HEATR3Q7Z4Q2 680 aa11.81□□□□□ -0.52
UFD1-206ENST00000466373 BLIDQ8IZY5 108 aa11.81□□□□□ -0.52
UFD1-206ENST00000466373 ATRIPQ8WXE1 791 aa11.81□□□□□ -0.52
UFD1-206ENST00000466373 STX10O60499 249 aa11.8□□□□□ -0.52
UFD1-206ENST00000466373 E2F4Q16254 413 aa11.8□□□□□ -0.52
UFD1-206ENST00000466373 ARHGAP29Q52LW3 1261 aa11.8□□□□□ -0.52
UFD1-206ENST00000466373 SPTY2D1Q68D10 685 aaPredicted RBP11.8□□□□□ -0.52
UFD1-206ENST00000466373 FEZ1Q99689 392 aa11.8□□□□□ -0.52
UFD1-206ENST00000466373 CARD6Q9BX69 1037 aa11.8□□□□□ -0.52
UFD1-206ENST00000466373 INF2Q27J81 1249 aa11.8□□□□□ -0.52
UFD1-206ENST00000466373 SLC35G1Q2M3R5 365 aa11.8□□□□□ -0.52
UFD1-206ENST00000466373 ZNF444Q8N0Y2 327 aaPredicted RBP11.8□□□□□ -0.52
UFD1-206ENST00000466373 MNS1Q8NEH6 495 aa11.8□□□□□ -0.52
UFD1-206ENST00000466373 NOL10Q9BSC4 688 aaKnown RBP11.8□□□□□ -0.52
UFD1-206ENST00000466373 VPS16Q9H269 839 aa11.8□□□□□ -0.52
UFD1-206ENST00000466373 EPC1Q9H2F5 836 aa11.8□□□□□ -0.52
UFD1-206ENST00000466373 LZTFL1Q9NQ48 299 aa11.8□□□□□ -0.52
UFD1-206ENST00000466373 DDX41Q9UJV9 622 aaKnown RBP11.8□□□□□ -0.52
UFD1-206ENST00000466373 PHLPP2Q6ZVD8 1323 aa11.8□□□□□ -0.52
UFD1-206ENST00000466373 CCDC88AQ3V6T2 1871 aa11.8□□□□□ -0.52
UFD1-206ENST00000466373 CCDC194A0A1B0GVG4 234 aa11.8□□□□□ -0.52
UFD1-206ENST00000466373 AKR1B15C9JRZ8 316 aaPredicted RBP11.8□□□□□ -0.52
UFD1-206ENST00000466373 CYTH3O43739 400 aa11.8□□□□□ -0.52
UFD1-206ENST00000466373 RC3H1Q5TC82 1133 aaKnown RBP11.8□□□□□ -0.52
UFD1-206ENST00000466373 PDXDC2PQ6P474 469 aa11.8□□□□□ -0.52
UFD1-206ENST00000466373 PPFIBP1Q86W92 1011 aa11.8□□□□□ -0.52
UFD1-206ENST00000466373 OGFRQ9NZT2 677 aa11.8□□□□□ -0.52
UFD1-206ENST00000466373 ADD3Q9UEY8 706 aaKnown RBP11.8□□□□□ -0.52
UFD1-206ENST00000466373 MKRN1Q9UHC7 482 aaKnown RBP11.8□□□□□ -0.52
UFD1-206ENST00000466373 GDAQ9Y2T3 454 aa11.8□□□□□ -0.52
UFD1-206ENST00000466373 WWC2Q6AWC2 1192 aa11.79□□□□□ -0.52
UFD1-206ENST00000466373 TMEM60Q9H2L4 133 aa11.79□□□□□ -0.52
UFD1-206ENST00000466373 MRPL44Q9H9J2 332 aaKnown RBP11.79□□□□□ -0.52
UFD1-206ENST00000466373 MAD2L2Q9UI95 211 aa11.79□□□□□ -0.52
UFD1-206ENST00000466373 PARP3Q9Y6F1 533 aa11.79□□□□□ -0.52
UFD1-206ENST00000466373 PDS5AQ29RF7 1337 aaKnown RBP11.79□□□□□ -0.52
UFD1-206ENST00000466373 CASP14P31944 242 aa11.79□□□□□ -0.52
UFD1-206ENST00000466373 STAT6P42226 847 aa11.79□□□□□ -0.52
UFD1-206ENST00000466373 TRAPPC3LQ5T215 181 aa11.79□□□□□ -0.52
UFD1-206ENST00000466373 CDKAL1Q5VV42 579 aa11.79□□□□□ -0.52
UFD1-206ENST00000466373 FAM196AQ6ZSG2 479 aa11.79□□□□□ -0.52
UFD1-206ENST00000466373 CNBD1Q8NA66 436 aa11.79□□□□□ -0.52
UFD1-206ENST00000466373 WDR66Q8TBY9 1149 aa11.79□□□□□ -0.52
UFD1-206ENST00000466373 EEF2KMTQ96G04 330 aa11.79□□□□□ -0.52
UFD1-206ENST00000466373 VAT1LQ9HCJ6 419 aa11.79□□□□□ -0.52
UFD1-206ENST00000466373 PCDHA4Q9UN74 947 aa11.79□□□□□ -0.52
UFD1-206ENST00000466373 IRS2Q9Y4H2 1338 aa11.79□□□□□ -0.52
UFD1-206ENST00000466373 DLEC1Q9Y238 1755 aa11.79□□□□□ -0.52
UFD1-206ENST00000466373 CALML3P27482 149 aa11.78□□□□□ -0.52
UFD1-206ENST00000466373 CASQ1P31415 396 aa11.78□□□□□ -0.52
UFD1-206ENST00000466373 TRAPPC10P48553 1259 aa11.78□□□□□ -0.52
UFD1-206ENST00000466373 VPS72Q15906 364 aa11.78□□□□□ -0.52
UFD1-206ENST00000466373 DGKHQ86XP1 1220 aa11.78□□□□□ -0.52
UFD1-206ENST00000466373 UBXN4Q92575 508 aa11.78□□□□□ -0.52
UFD1-206ENST00000466373 TMEM47Q9BQJ4 181 aa11.78□□□□□ -0.52
UFD1-206ENST00000466373 ZNF446Q9NWS9 450 aa11.78□□□□□ -0.52
UFD1-206ENST00000466373 TAB2Q9NYJ8 693 aa11.78□□□□□ -0.52
UFD1-206ENST00000466373 N4BP3O15049 544 aa11.78□□□□□ -0.52
UFD1-206ENST00000466373 BAG3O95817 575 aa11.78□□□□□ -0.52
UFD1-206ENST00000466373 GRAPQ13588 217 aa11.78□□□□□ -0.52
UFD1-206ENST00000466373 RAD9BQ6WBX8 426 aa11.78□□□□□ -0.52
UFD1-206ENST00000466373 FCHSD1Q86WN1 690 aa11.78□□□□□ -0.52
UFD1-206ENST00000466373 AMOTL1Q8IY63 956 aa11.78□□□□□ -0.52
UFD1-206ENST00000466373 C4orf32Q8N8J7 132 aa11.78□□□□□ -0.52
UFD1-206ENST00000466373 GRAPLQ8TC17 118 aaPredicted RBP11.78□□□□□ -0.52
UFD1-206ENST00000466373 KIAA1551Q9HCM1 1747 aa11.78□□□□□ -0.52
UFD1-206ENST00000466373 LAMB1P07942 1786 aa11.78□□□□□ -0.52
UFD1-206ENST00000466373 TRIM49BA6NDI0 452 aa11.78□□□□□ -0.52
UFD1-206ENST00000466373 FXR1P51114 621 aaKnown RBP eCLIP11.78□□□□□ -0.52
UFD1-206ENST00000466373 KRT31Q15323 416 aa11.78□□□□□ -0.52
UFD1-206ENST00000466373 FILIP1LQ4L180 1135 aa11.78□□□□□ -0.52
UFD1-206ENST00000466373 NELFBQ8WX92 580 aa11.78□□□□□ -0.52
UFD1-206ENST00000466373 ZHX1Q9UKY1 873 aaPredicted RBP11.78□□□□□ -0.52
UFD1-206ENST00000466373 TNRC6CQ9HCJ0 1690 aaKnown RBP11.77□□□□□ -0.52
UFD1-206ENST00000466373 PES1O00541 588 aaKnown RBP11.77□□□□□ -0.53
UFD1-206ENST00000466373 GTPBP6O43824 516 aaPredicted RBP11.77□□□□□ -0.53
UFD1-206ENST00000466373 UFL1O94874 794 aa11.77□□□□□ -0.53
UFD1-206ENST00000466373 RPN1P04843 607 aaKnown RBP11.77□□□□□ -0.53
UFD1-206ENST00000466373 TXLNAP40222 546 aa11.77□□□□□ -0.53
UFD1-206ENST00000466373 BTDP43251 543 aa11.77□□□□□ -0.53
UFD1-206ENST00000466373 GPSM2P81274 684 aa11.77□□□□□ -0.53
UFD1-206ENST00000466373 GRM4Q14833 912 aa11.77□□□□□ -0.53
UFD1-206ENST00000466373 USP17L2Q6R6M4 530 aa11.77□□□□□ -0.53
UFD1-206ENST00000466373 DTHD1Q6ZMT9 781 aa11.77□□□□□ -0.53
UFD1-206ENST00000466373 ZSWIM4Q9H7M6 989 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms