RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 CUL4AQ13619 759 aa7.03□□□□□ -1.28
CHMP3-206ENST00000466032 TMEM67Q5HYA8 995 aa7.03□□□□□ -1.28
CHMP3-206ENST00000466032 TATDN1Q6P1N9 297 aa7.03□□□□□ -1.28
CHMP3-206ENST00000466032 BLOC1S3Q6QNY0 202 aa7.03□□□□□ -1.28
CHMP3-206ENST00000466032 Q6ZUG5 572 aa7.03□□□□□ -1.28
CHMP3-206ENST00000466032 TBC1D10CQ8IV04 446 aa7.03□□□□□ -1.28
CHMP3-206ENST00000466032 FAM177A1Q8N128 213 aaPredicted RBP7.03□□□□□ -1.28
CHMP3-206ENST00000466032 NEDD1Q8NHV4 660 aa7.03□□□□□ -1.28
CHMP3-206ENST00000466032 DCPSQ96C86 337 aaKnown RBP7.03□□□□□ -1.28
CHMP3-206ENST00000466032 CSRNP1Q96S65 589 aa7.03□□□□□ -1.28
CHMP3-206ENST00000466032 ZSCAN10Q96SZ4 725 aaPredicted RBP7.03□□□□□ -1.28
CHMP3-206ENST00000466032 SLKQ9H2G2 1235 aaPredicted RBP7.03□□□□□ -1.28
CHMP3-206ENST00000466032 RBM28Q9NW13 759 aaKnown RBP7.03□□□□□ -1.28
CHMP3-206ENST00000466032 ZSWIM5Q9P217 1185 aa7.03□□□□□ -1.28
CHMP3-206ENST00000466032 RBM27Q9P2N5 1060 aaKnown RBP7.03□□□□□ -1.28
CHMP3-206ENST00000466032 FAM198AQ9UFP1 575 aa7.03□□□□□ -1.28
CHMP3-206ENST00000466032 PLIN4Q96Q06 1357 aa7.03□□□□□ -1.28
CHMP3-206ENST00000466032 LAMB1P07942 1786 aa7.03□□□□□ -1.28
CHMP3-206ENST00000466032 NAV1Q8NEY1 1877 aa7.02□□□□□ -1.28
CHMP3-206ENST00000466032 ECM29Q5VYK3 1845 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 TTC24A2A3L6 582 aaPredicted RBP7.02□□□□□ -1.29
CHMP3-206ENST00000466032 B4E1Z4 1266 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 SH2B2O14492 632 aaPredicted RBP7.02□□□□□ -1.29
CHMP3-206ENST00000466032 MSTNO14793 375 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 PFKFB2O60825 505 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 DDAH1O94760 285 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 SMARCA1P28370 1054 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 KIF5BP33176 963 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 PLCD1P51178 756 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 PRELPP51888 382 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 TFAP4Q01664 338 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 CERKLQ49MI3 558 aaPredicted RBP7.02□□□□□ -1.29
CHMP3-206ENST00000466032 RRP12Q5JTH9 1297 aaKnown RBP7.02□□□□□ -1.29
CHMP3-206ENST00000466032 IFIT1BQ5T764 474 aaKnown RBP7.02□□□□□ -1.29
CHMP3-206ENST00000466032 RCSD1Q6JBY9 416 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 NFXL1Q6ZNB6 911 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 STOX1Q6ZVD7 989 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 TMEM179Q6ZVK1 233 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 CATIPQ7Z7H3 387 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 SULF1Q8IWU6 871 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 IGDCC4Q8TDY8 1250 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 WASF1Q92558 559 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 BRF1Q92994 677 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 TMX3Q96JJ7 454 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 LZTS2Q9BRK4 669 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 SH2D4AQ9H788 454 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 KAT14Q9H8E8 782 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 KANSL2Q9H9L4 492 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 VEZTQ9HBM0 779 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 DDX4Q9NQI0 724 aaKnown RBP7.02□□□□□ -1.29
CHMP3-206ENST00000466032 PGAP2Q9UHJ9 254 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 PCDHB3Q9Y5E6 796 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 SLC12A7Q9Y666 1083 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 NID2Q14112 1375 aa7.02□□□□□ -1.29
CHMP3-206ENST00000466032 NEDD4P46934 1319 aa7.01□□□□□ -1.29
CHMP3-206ENST00000466032 SCN4AP35499 1836 aa7.01□□□□□ -1.29
CHMP3-206ENST00000466032 MYH1P12882 1939 aa7.01□□□□□ -1.29
CHMP3-206ENST00000466032 TCP10L2B9ZVM9 353 aa7.01□□□□□ -1.29
CHMP3-206ENST00000466032 C3orf80F5H4A9 247 aa7.01□□□□□ -1.29
CHMP3-206ENST00000466032 CPLX1O14810 134 aa7.01□□□□□ -1.29
CHMP3-206ENST00000466032 ZBTB43O43298 467 aa7.01□□□□□ -1.29
CHMP3-206ENST00000466032 DDNO94850 711 aaPredicted RBP7.01□□□□□ -1.29
CHMP3-206ENST00000466032 TTLL1O95922 423 aa7.01□□□□□ -1.29
CHMP3-206ENST00000466032 ASNSP08243 561 aa7.01□□□□□ -1.29
CHMP3-206ENST00000466032 TOP1P11387 765 aaKnown RBP7.01□□□□□ -1.29
CHMP3-206ENST00000466032 VEGFAP15692 232 aaPredicted RBP7.01□□□□□ -1.29
CHMP3-206ENST00000466032 RASA1P20936 1047 aa7.01□□□□□ -1.29
CHMP3-206ENST00000466032 IRS1P35568 1242 aa7.01□□□□□ -1.29
CHMP3-206ENST00000466032 NOVP48745 357 aa7.01□□□□□ -1.29
CHMP3-206ENST00000466032 MAP3K9P80192 1104 aa7.01□□□□□ -1.29
CHMP3-206ENST00000466032 NUCB2P80303 420 aa7.01□□□□□ -1.29
CHMP3-206ENST00000466032 NFIAQ12857 509 aa7.01□□□□□ -1.29
CHMP3-206ENST00000466032 TRAF1Q13077 416 aa7.01□□□□□ -1.29
CHMP3-206ENST00000466032 TOB2Q14106 344 aaPredicted RBP7.01□□□□□ -1.29
CHMP3-206ENST00000466032 RASA3Q14644 834 aa7.01□□□□□ -1.29
CHMP3-206ENST00000466032 NBPF9Q3BBW0 867 aa7.01□□□□□ -1.29
CHMP3-206ENST00000466032 RBM26Q5T8P6 1007 aaKnown RBP7.01□□□□□ -1.29
CHMP3-206ENST00000466032 TEX2Q8IWB9 1127 aa7.01□□□□□ -1.29
CHMP3-206ENST00000466032 FAM43AQ8N2R8 423 aa7.01□□□□□ -1.29
CHMP3-206ENST00000466032 MKL1Q969V6 931 aa7.01□□□□□ -1.29
CHMP3-206ENST00000466032 DEFB129Q9H1M3 183 aa7.01□□□□□ -1.29
CHMP3-206ENST00000466032 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.01□□□□□ -1.29
CHMP3-206ENST00000466032 NYAP2Q9P242 653 aa7.01□□□□□ -1.29
CHMP3-206ENST00000466032 SAP30BPQ9UHR5 308 aaKnown RBP7.01□□□□□ -1.29
CHMP3-206ENST00000466032 DDX60LQ5H9U9 1706 aaKnown RBP7.01□□□□□ -1.29
CHMP3-206ENST00000466032 TNKSO95271 1327 aa7.01□□□□□ -1.29
CHMP3-206ENST00000466032 KLF18A0A0U1RQI7 1052 aa7□□□□□ -1.29
CHMP3-206ENST00000466032 CLRN2A0PK11 232 aa7□□□□□ -1.29
CHMP3-206ENST00000466032 DDTLA6NHG4 134 aaPredicted RBP7□□□□□ -1.29
CHMP3-206ENST00000466032 PPP1R12BO60237 982 aaPredicted RBP7□□□□□ -1.29
CHMP3-206ENST00000466032 CTNND1O60716 968 aaKnown RBP7□□□□□ -1.29
CHMP3-206ENST00000466032 XBP1P17861 261 aa7□□□□□ -1.29
CHMP3-206ENST00000466032 PDIA3P30101 505 aaKnown RBP7□□□□□ -1.29
CHMP3-206ENST00000466032 EPHX2P34913 555 aa7□□□□□ -1.29
CHMP3-206ENST00000466032 EPS15P42566 896 aa7□□□□□ -1.29
CHMP3-206ENST00000466032 METAP2P50579 478 aaKnown RBP eCLIP7□□□□□ -1.29
CHMP3-206ENST00000466032 ANTXR2P58335 489 aa7□□□□□ -1.29
CHMP3-206ENST00000466032 TCP10Q12799 353 aa7□□□□□ -1.29
CHMP3-206ENST00000466032 SEC23AQ15436 765 aa7□□□□□ -1.29
CHMP3-206ENST00000466032 ABCB5Q2M3G0 1257 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms