RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 F5H6K3 240 aa12.63□□□□□ -0.39
NPHP3-203ENST00000465756 GRK4P32298 578 aa12.63□□□□□ -0.39
NPHP3-203ENST00000465756 KLRC3Q07444 240 aa12.63□□□□□ -0.39
NPHP3-203ENST00000465756 DDX11Q96FC9 970 aa12.63□□□□□ -0.39
NPHP3-203ENST00000465756 P2RX7Q99572 595 aaKnown RBP12.63□□□□□ -0.39
NPHP3-203ENST00000465756 STAT2P52630 851 aa12.63□□□□□ -0.39
NPHP3-203ENST00000465756 HAND2P61296 217 aa12.63□□□□□ -0.39
NPHP3-203ENST00000465756 CTDSPL2Q05D32 466 aa12.63□□□□□ -0.39
NPHP3-203ENST00000465756 NCAPG2Q86XI2 1143 aa12.63□□□□□ -0.39
NPHP3-203ENST00000465756 ACER1Q8TDN7 264 aa12.63□□□□□ -0.39
NPHP3-203ENST00000465756 PXYLP1Q8TE99 480 aa12.63□□□□□ -0.39
NPHP3-203ENST00000465756 MYH8P13535 1937 aa12.62□□□□□ -0.39
NPHP3-203ENST00000465756 SGSM2O43147 1006 aa12.62□□□□□ -0.39
NPHP3-203ENST00000465756 CALM1P0DP23 149 aa12.62□□□□□ -0.39
NPHP3-203ENST00000465756 CALM2P0DP24 149 aa12.62□□□□□ -0.39
NPHP3-203ENST00000465756 CALM3P0DP25 149 aa12.62□□□□□ -0.39
NPHP3-203ENST00000465756 NFXL1Q6ZNB6 911 aa12.62□□□□□ -0.39
NPHP3-203ENST00000465756 TEX13BQ9BXU2 312 aa12.62□□□□□ -0.39
NPHP3-203ENST00000465756 ADCY3O60266 1144 aa12.62□□□□□ -0.39
NPHP3-203ENST00000465756 FCER1AP12319 257 aa12.62□□□□□ -0.39
NPHP3-203ENST00000465756 IFIT1BQ5T764 474 aaKnown RBP12.62□□□□□ -0.39
NPHP3-203ENST00000465756 CATIPQ7Z7H3 387 aa12.62□□□□□ -0.39
NPHP3-203ENST00000465756 GMCL1Q96IK5 515 aa12.62□□□□□ -0.39
NPHP3-203ENST00000465756 MAF1Q9H063 256 aa12.62□□□□□ -0.39
NPHP3-203ENST00000465756 UPF2Q9HAU5 1272 aaKnown RBP12.62□□□□□ -0.39
NPHP3-203ENST00000465756 HPS5Q9UPZ3 1129 aa12.62□□□□□ -0.39
NPHP3-203ENST00000465756 RBM19Q9Y4C8 960 aaKnown RBP12.62□□□□□ -0.39
NPHP3-203ENST00000465756 ASPRV1Q53RT3 343 aa12.62□□□□□ -0.39
NPHP3-203ENST00000465756 TREML2Q5T2D2 321 aa12.62□□□□□ -0.39
NPHP3-203ENST00000465756 IFFO2Q5TF58 517 aa12.62□□□□□ -0.39
NPHP3-203ENST00000465756 CHST13Q8NET6 341 aa12.62□□□□□ -0.39
NPHP3-203ENST00000465756 PPP1R9AQ9ULJ8 1098 aa12.62□□□□□ -0.39
NPHP3-203ENST00000465756 MSCO60682 206 aa12.61□□□□□ -0.39
NPHP3-203ENST00000465756 PDE4AP27815 886 aa12.61□□□□□ -0.39
NPHP3-203ENST00000465756 CEP95Q96GE4 821 aa12.61□□□□□ -0.39
NPHP3-203ENST00000465756 APBA2Q99767 749 aa12.61□□□□□ -0.39
NPHP3-203ENST00000465756 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.61□□□□□ -0.39
NPHP3-203ENST00000465756 IFIT3O14879 490 aaKnown RBP12.61□□□□□ -0.39
NPHP3-203ENST00000465756 CAPN15O75808 1086 aa12.61□□□□□ -0.39
NPHP3-203ENST00000465756 HMGCRP04035 888 aa12.61□□□□□ -0.39
NPHP3-203ENST00000465756 STAT3P40763 770 aa12.61□□□□□ -0.39
NPHP3-203ENST00000465756 ABRAQ8N0Z2 381 aa12.61□□□□□ -0.39
NPHP3-203ENST00000465756 CTCFLQ8NI51 663 aaPredicted RBP12.61□□□□□ -0.39
NPHP3-203ENST00000465756 CCDC69A6NI79 296 aa12.61□□□□□ -0.39
NPHP3-203ENST00000465756 PLA2G6O60733 806 aa12.61□□□□□ -0.39
NPHP3-203ENST00000465756 NDUFB10O96000 172 aa12.61□□□□□ -0.39
NPHP3-203ENST00000465756 FAM47AQ5JRC9 791 aa12.61□□□□□ -0.39
NPHP3-203ENST00000465756 FAM83BQ5T0W9 1011 aa12.61□□□□□ -0.39
NPHP3-203ENST00000465756 LZTS2Q9BRK4 669 aa12.61□□□□□ -0.39
NPHP3-203ENST00000465756 ESYT1Q9BSJ8 1104 aa12.61□□□□□ -0.39
NPHP3-203ENST00000465756 LAMB1P07942 1786 aa12.6□□□□□ -0.39
NPHP3-203ENST00000465756 WTAPQ15007 396 aa12.6□□□□□ -0.39
NPHP3-203ENST00000465756 TMEM87BQ96K49 555 aa12.6□□□□□ -0.39
NPHP3-203ENST00000465756 MYO5AQ9Y4I1 1855 aaKnown RBP12.6□□□□□ -0.39
NPHP3-203ENST00000465756 PARP1P09874 1014 aaKnown RBP12.6□□□□□ -0.39
NPHP3-203ENST00000465756 MCM5P33992 734 aa12.6□□□□□ -0.39
NPHP3-203ENST00000465756 LRRC47Q8N1G4 583 aaKnown RBP12.6□□□□□ -0.39
NPHP3-203ENST00000465756 KDM4AO75164 1064 aa12.6□□□□□ -0.39
NPHP3-203ENST00000465756 SLFNL1Q499Z3 407 aa12.6□□□□□ -0.39
NPHP3-203ENST00000465756 CPLX2Q6PUV4 134 aaKnown RBP12.6□□□□□ -0.39
NPHP3-203ENST00000465756 SPICE1Q8N0Z3 855 aa12.6□□□□□ -0.39
NPHP3-203ENST00000465756 KIFC2Q96AC6 838 aa12.6□□□□□ -0.39
NPHP3-203ENST00000465756 MMP19Q99542 508 aa12.6□□□□□ -0.39
NPHP3-203ENST00000465756 SPATC1LQ9H0A9 340 aa12.6□□□□□ -0.39
NPHP3-203ENST00000465756 TMEM232C9JQI7 657 aa12.59□□□□□ -0.39
NPHP3-203ENST00000465756 SPC25Q9HBM1 224 aa12.59□□□□□ -0.39
NPHP3-203ENST00000465756 MTMR7Q9Y216 660 aa12.59□□□□□ -0.39
NPHP3-203ENST00000465756 ATAD5Q96QE3 1844 aa12.59□□□□□ -0.39
NPHP3-203ENST00000465756 XRCC5P13010 732 aaKnown RBP12.59□□□□□ -0.39
NPHP3-203ENST00000465756 SLC4A3P48751 1232 aa12.59□□□□□ -0.39
NPHP3-203ENST00000465756 MAP2K5Q13163 448 aa12.59□□□□□ -0.39
NPHP3-203ENST00000465756 ARMC5Q96C12 935 aa12.59□□□□□ -0.39
NPHP3-203ENST00000465756 ZSCAN10Q96SZ4 725 aaPredicted RBP12.59□□□□□ -0.39
NPHP3-203ENST00000465756 HTATIP2Q9BUP3 242 aa12.59□□□□□ -0.39
NPHP3-203ENST00000465756 HMX1Q9NP08 348 aaPredicted RBP12.59□□□□□ -0.39
NPHP3-203ENST00000465756 RBM8AQ9Y5S9 174 aaKnown RBP12.59□□□□□ -0.39
NPHP3-203ENST00000465756 ADGRA2Q96PE1 1338 aa12.59□□□□□ -0.39
NPHP3-203ENST00000465756 SPDYE16A6NNV3 312 aaPredicted RBP12.59□□□□□ -0.39
NPHP3-203ENST00000465756 FLT3LGP49771 235 aa12.59□□□□□ -0.39
NPHP3-203ENST00000465756 RIOX2Q8IUF8 465 aa12.59□□□□□ -0.39
NPHP3-203ENST00000465756 ADD3Q9UEY8 706 aaKnown RBP12.59□□□□□ -0.39
NPHP3-203ENST00000465756 NRBP1Q9UHY1 535 aa12.59□□□□□ -0.39
NPHP3-203ENST00000465756 CASP8AP2Q9UKL3 1982 aa12.59□□□□□ -0.39
NPHP3-203ENST00000465756 FGRP09769 529 aa12.58□□□□□ -0.4
NPHP3-203ENST00000465756 RRP1BQ14684 758 aaKnown RBP12.58□□□□□ -0.4
NPHP3-203ENST00000465756 ZNF589Q86UQ0 364 aaPredicted RBP12.58□□□□□ -0.4
NPHP3-203ENST00000465756 CNPY2Q9Y2B0 182 aa12.58□□□□□ -0.4
NPHP3-203ENST00000465756 PTCH2Q9Y6C5 1203 aa12.58□□□□□ -0.4
NPHP3-203ENST00000465756 TMEM67Q5HYA8 995 aa12.58□□□□□ -0.4
NPHP3-203ENST00000465756 SYDE2Q5VT97 1194 aa12.58□□□□□ -0.4
NPHP3-203ENST00000465756 PFASO15067 1338 aa12.58□□□□□ -0.4
NPHP3-203ENST00000465756 GSPT1P15170 499 aaKnown RBP12.58□□□□□ -0.4
NPHP3-203ENST00000465756 MOGSQ13724 837 aa12.58□□□□□ -0.4
NPHP3-203ENST00000465756 MCF2L2Q86YR7 1114 aa12.58□□□□□ -0.4
NPHP3-203ENST00000465756 MSL3Q8N5Y2 521 aaKnown RBP12.58□□□□□ -0.4
NPHP3-203ENST00000465756 ACAD9Q9H845 621 aa12.58□□□□□ -0.4
NPHP3-203ENST00000465756 CCDC196A0A1B0GTZ2 297 aa12.57□□□□□ -0.4
NPHP3-203ENST00000465756 GUCY1A2P33402 732 aa12.57□□□□□ -0.4
NPHP3-203ENST00000465756 ANKRD35Q8N283 1001 aa12.57□□□□□ -0.4
NPHP3-203ENST00000465756 ATG4CQ96DT6 458 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms