RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 KCNB2Q92953 911 aa23.92■■□□□ 1.42
SKA3-205ENST00000465471 FBXO28Q9NVF7 368 aa23.92■■□□□ 1.42
SKA3-205ENST00000465471 HOXC10Q9NYD6 342 aa23.92■■□□□ 1.42
SKA3-205ENST00000465471 HTTP42858 3142 aa23.91■■□□□ 1.42
SKA3-205ENST00000465471 RAD21O60216 631 aa23.91■■□□□ 1.42
SKA3-205ENST00000465471 PEX10O60683 326 aa23.91■■□□□ 1.42
SKA3-205ENST00000465471 ERVK-9P63128 1117 aa23.91■■□□□ 1.42
SKA3-205ENST00000465471 ERVK-24P63145 666 aa23.91■■□□□ 1.42
SKA3-205ENST00000465471 KIF22Q14807 665 aa23.91■■□□□ 1.42
SKA3-205ENST00000465471 SEC23AQ15436 765 aa23.91■■□□□ 1.42
SKA3-205ENST00000465471 TSGA10IPQ3SY00 556 aa23.91■■□□□ 1.42
SKA3-205ENST00000465471 RNF20Q5VTR2 975 aa23.91■■□□□ 1.42
SKA3-205ENST00000465471 RALYLQ86SE5 291 aaKnown RBP23.91■■□□□ 1.42
SKA3-205ENST00000465471 TRIM47Q96LD4 638 aa23.91■■□□□ 1.42
SKA3-205ENST00000465471 BTBD7Q9P203 1132 aa23.91■■□□□ 1.42
SKA3-205ENST00000465471 PPP1R9AQ9ULJ8 1098 aa23.91■■□□□ 1.42
SKA3-205ENST00000465471 GNRH1P01148 92 aa23.9■■□□□ 1.42
SKA3-205ENST00000465471 BMP3P12645 472 aa23.9■■□□□ 1.42
SKA3-205ENST00000465471 ANTXR2P58335 489 aa23.9■■□□□ 1.42
SKA3-205ENST00000465471 RASGRP2Q7LDG7 609 aa23.9■■□□□ 1.42
SKA3-205ENST00000465471 MB21D1Q8N884 522 aa23.9■■□□□ 1.42
SKA3-205ENST00000465471 GPRC5AQ8NFJ5 357 aa23.9■■□□□ 1.42
SKA3-205ENST00000465471 ATG4CQ96DT6 458 aa23.9■■□□□ 1.42
SKA3-205ENST00000465471 EFCC1Q9HA90 598 aa23.9■■□□□ 1.42
SKA3-205ENST00000465471 SNHG28P0DPA3 235 aa23.89■■□□□ 1.41
SKA3-205ENST00000465471 HSPA4P34932 840 aa23.89■■□□□ 1.41
SKA3-205ENST00000465471 PSMC4P43686 418 aa23.89■■□□□ 1.41
SKA3-205ENST00000465471 ARHGEF6Q15052 776 aa23.89■■□□□ 1.41
SKA3-205ENST00000465471 Q3C1V9 767 aa23.89■■□□□ 1.41
SKA3-205ENST00000465471 RASEFQ8IZ41 740 aa23.89■■□□□ 1.41
SKA3-205ENST00000465471 DCAF4Q8WV16 495 aa23.89■■□□□ 1.41
SKA3-205ENST00000465471 SLF1Q9BQI6 1058 aa23.89■■□□□ 1.41
SKA3-205ENST00000465471 UBAC1Q9BSL1 405 aa23.89■■□□□ 1.41
SKA3-205ENST00000465471 PAGR1Q9BTK6 254 aa23.89■■□□□ 1.41
SKA3-205ENST00000465471 TRIM17Q9Y577 477 aa23.89■■□□□ 1.41
SKA3-205ENST00000465471 PLA2G6O60733 806 aa23.88■■□□□ 1.41
SKA3-205ENST00000465471 MCCP23508 829 aa23.88■■□□□ 1.41
SKA3-205ENST00000465471 SLC1A4P43007 532 aa23.88■■□□□ 1.41
SKA3-205ENST00000465471 FCGRTP55899 365 aa23.88■■□□□ 1.41
SKA3-205ENST00000465471 COL9A3Q14050 684 aaPredicted RBP23.88■■□□□ 1.41
SKA3-205ENST00000465471 PKN2Q16513 984 aaKnown RBP23.88■■□□□ 1.41
SKA3-205ENST00000465471 REPS2Q8NFH8 660 aa23.88■■□□□ 1.41
SKA3-205ENST00000465471 MCOLN1Q9GZU1 580 aa23.88■■□□□ 1.41
SKA3-205ENST00000465471 FEM1BQ9UK73 627 aa23.88■■□□□ 1.41
SKA3-205ENST00000465471 PDHBP11177 359 aa23.87■■□□□ 1.41
SKA3-205ENST00000465471 MTA3Q9BTC8 594 aa23.87■■□□□ 1.41
SKA3-205ENST00000465471 DOCK3Q8IZD9 2030 aa23.87■■□□□ 1.41
SKA3-205ENST00000465471 PLXNB2O15031 1838 aa23.87■■□□□ 1.41
SKA3-205ENST00000465471 VWA5AO00534 786 aa23.86■■□□□ 1.41
SKA3-205ENST00000465471 PRPF38AQ8NAV1 312 aaKnown RBP23.86■■□□□ 1.41
SKA3-205ENST00000465471 PNMA1Q8ND90 353 aa23.86■■□□□ 1.41
SKA3-205ENST00000465471 PORCNQ9H237 461 aa23.86■■□□□ 1.41
SKA3-205ENST00000465471 PTPN22Q9Y2R2 807 aa23.86■■□□□ 1.41
SKA3-205ENST00000465471 TMEM232C9JQI7 657 aa23.85■■□□□ 1.41
SKA3-205ENST00000465471 FMNL1O95466 1100 aaPredicted RBP23.85■■□□□ 1.41
SKA3-205ENST00000465471 STAT2P52630 851 aa23.85■■□□□ 1.41
SKA3-205ENST00000465471 FBXO46Q6PJ61 603 aaPredicted RBP23.85■■□□□ 1.41
SKA3-205ENST00000465471 KCTD1Q719H9 257 aa23.85■■□□□ 1.41
SKA3-205ENST00000465471 FAM160B2Q86V87 743 aa23.85■■□□□ 1.41
SKA3-205ENST00000465471 IGDCC4Q8TDY8 1250 aa23.85■■□□□ 1.41
SKA3-205ENST00000465471 USP26Q9BXU7 913 aa23.85■■□□□ 1.41
SKA3-205ENST00000465471 KAT14Q9H8E8 782 aa23.85■■□□□ 1.41
SKA3-205ENST00000465471 SRRDQ9UH36 339 aa23.85■■□□□ 1.41
SKA3-205ENST00000465471 ZKSCAN1P17029 563 aaPredicted RBP23.84■■□□□ 1.41
SKA3-205ENST00000465471 MAPK4P31152 587 aa23.84■■□□□ 1.41
SKA3-205ENST00000465471 MCM5P33992 734 aa23.84■■□□□ 1.41
SKA3-205ENST00000465471 PRMT2P55345 433 aa23.84■■□□□ 1.41
SKA3-205ENST00000465471 ZNF543Q08ER8 600 aa23.84■■□□□ 1.41
SKA3-205ENST00000465471 TMEM132BQ14DG7 1078 aa23.84■■□□□ 1.41
SKA3-205ENST00000465471 ADCK5Q3MIX3 580 aa23.84■■□□□ 1.41
SKA3-205ENST00000465471 IFIT1BQ5T764 474 aaKnown RBP23.84■■□□□ 1.41
SKA3-205ENST00000465471 BTNL9Q6UXG8 535 aa23.84■■□□□ 1.41
SKA3-205ENST00000465471 CHST3Q7LGC8 479 aa23.84■■□□□ 1.41
SKA3-205ENST00000465471 SPATC1LQ9H0A9 340 aa23.84■■□□□ 1.41
SKA3-205ENST00000465471 ZNF214Q9UL59 606 aaPredicted RBP23.84■■□□□ 1.41
SKA3-205ENST00000465471 TNPO2O14787 897 aaKnown RBP23.83■■□□□ 1.41
SKA3-205ENST00000465471 IFIT3O14879 490 aaKnown RBP23.83■■□□□ 1.41
SKA3-205ENST00000465471 CCNA1P78396 465 aa23.83■■□□□ 1.41
SKA3-205ENST00000465471 KRT32Q14532 448 aa23.83■■□□□ 1.41
SKA3-205ENST00000465471 SART3Q15020 963 aaKnown RBP23.83■■□□□ 1.41
SKA3-205ENST00000465471 TNS4Q8IZW8 715 aa23.83■■□□□ 1.41
SKA3-205ENST00000465471 CHURC1Q8WUH1 139 aa23.83■■□□□ 1.41
SKA3-205ENST00000465471 MOV10L1Q9BXT6 1211 aaKnown RBP23.83■■□□□ 1.41
SKA3-205ENST00000465471 SLC38A10Q9HBR0 1119 aa23.83■■□□□ 1.41
SKA3-205ENST00000465471 SENP2Q9HC62 589 aa23.83■■□□□ 1.41
SKA3-205ENST00000465471 SNX14Q9Y5W7 946 aa23.83■■□□□ 1.41
SKA3-205ENST00000465471 WDR19Q8NEZ3 1342 aa23.83■■□□□ 1.4
SKA3-205ENST00000465471 ZNF236Q9UL36 1845 aa23.82■■□□□ 1.4
SKA3-205ENST00000465471 ATP2A1O14983 1001 aa23.82■■□□□ 1.4
SKA3-205ENST00000465471 PRC1O43663 620 aa23.82■■□□□ 1.4
SKA3-205ENST00000465471 ECM2O94769 699 aaPredicted RBP23.82■■□□□ 1.4
SKA3-205ENST00000465471 HOXD10P28358 340 aa23.82■■□□□ 1.4
SKA3-205ENST00000465471 CCDC96Q2M329 555 aa23.82■■□□□ 1.4
SKA3-205ENST00000465471 SHCBP1Q8NEM2 672 aa23.82■■□□□ 1.4
SKA3-205ENST00000465471 CHMP4CQ96CF2 233 aa23.82■■□□□ 1.4
SKA3-205ENST00000465471 NEK1Q96PY6 1258 aa23.82■■□□□ 1.4
SKA3-205ENST00000465471 LY9Q9HBG7 655 aa23.82■■□□□ 1.4
SKA3-205ENST00000465471 MTMR7Q9Y216 660 aa23.82■■□□□ 1.4
SKA3-205ENST00000465471 GTF3C3Q9Y5Q9 886 aa23.82■■□□□ 1.4
SKA3-205ENST00000465471 ERICH2A1L162 156 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms