RNA–Protein interactions for RNA: ENST00000465085.2

ABCD4-203, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 1,123 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-203ENST00000465085 TRIM60Q495X7 471 aa15.13■□□□□ 0.01
ABCD4-203ENST00000465085 C12orf60Q5U649 245 aa15.13■□□□□ 0.01
ABCD4-203ENST00000465085 C16orf86Q6ZW13 317 aa15.13■□□□□ 0.01
ABCD4-203ENST00000465085 SIRT2Q8IXJ6 389 aa15.13■□□□□ 0.01
ABCD4-203ENST00000465085 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.13■□□□□ 0.01
ABCD4-203ENST00000465085 ZBED9Q6R2W3 1325 aa15.13■□□□□ 0.01
ABCD4-203ENST00000465085 TTC28Q96AY4 2481 aa15.12■□□□□ 0.01
ABCD4-203ENST00000465085 MYH4Q9Y623 1939 aa15.12■□□□□ 0.01
ABCD4-203ENST00000465085 ATP5JP18859 108 aa15.12■□□□□ 0.01
ABCD4-203ENST00000465085 ADCYAP1R1P41586 468 aa15.12■□□□□ 0.01
ABCD4-203ENST00000465085 CDK8P49336 464 aa15.12■□□□□ 0.01
ABCD4-203ENST00000465085 UBE3CQ15386 1083 aa15.12■□□□□ 0.01
ABCD4-203ENST00000465085 SLFNL1Q499Z3 407 aa15.12■□□□□ 0.01
ABCD4-203ENST00000465085 FAM47AQ5JRC9 791 aa15.12■□□□□ 0.01
ABCD4-203ENST00000465085 PRAMEF19Q5SWL8 479 aa15.12■□□□□ 0.01
ABCD4-203ENST00000465085 ZNF697Q5TEC3 545 aa15.12■□□□□ 0.01
ABCD4-203ENST00000465085 AMOTL1Q8IY63 956 aa15.12■□□□□ 0.01
ABCD4-203ENST00000465085 HAUS7Q99871 368 aa15.12■□□□□ 0.01
ABCD4-203ENST00000465085 PRDM5Q9NQX1 630 aaPredicted RBP15.12■□□□□ 0.01
ABCD4-203ENST00000465085 PDLIM7Q9NR12 457 aa15.12■□□□□ 0.01
ABCD4-203ENST00000465085 ZBTB40Q9NUA8 1239 aa15.12■□□□□ 0.01
ABCD4-203ENST00000465085 DDX19BQ9UMR2 479 aa15.12■□□□□ 0.01
ABCD4-203ENST00000465085 CYP2D7A0A087X1C5 515 aa15.11■□□□□ 0.01
ABCD4-203ENST00000465085 USP17L12C9JPN9 530 aa15.11■□□□□ 0.01
ABCD4-203ENST00000465085 USP17L21D6R901 530 aa15.11■□□□□ 0.01
ABCD4-203ENST00000465085 SMIM22K7EJ46 135 aa15.11■□□□□ 0.01
ABCD4-203ENST00000465085 MYCNP04198 464 aaPredicted RBP15.11■□□□□ 0.01
ABCD4-203ENST00000465085 EEF2P13639 858 aaKnown RBP15.11■□□□□ 0.01
ABCD4-203ENST00000465085 SHHQ15465 462 aa15.11■□□□□ 0.01
ABCD4-203ENST00000465085 RIOX2Q8IUF8 465 aa15.11■□□□□ 0.01
ABCD4-203ENST00000465085 DDRGK1Q96HY6 314 aa15.11■□□□□ 0.01
ABCD4-203ENST00000465085 MMP19Q99542 508 aa15.11■□□□□ 0.01
ABCD4-203ENST00000465085 BOLA2Q9H3K6 86 aa15.11■□□□□ 0.01
ABCD4-203ENST00000465085 KANSL2Q9H9L4 492 aa15.11■□□□□ 0.01
ABCD4-203ENST00000465085 PHF24Q9UPV7 400 aa15.11■□□□□ 0.01
ABCD4-203ENST00000465085 DIS3Q9Y2L1 958 aaKnown RBP15.11■□□□□ 0.01
ABCD4-203ENST00000465085 PRUNE2Q8WUY3 3088 aa15.11■□□□□ 0.01
ABCD4-203ENST00000465085 RARBP10826 455 aa15.1■□□□□ 0.01
ABCD4-203ENST00000465085 COPB2P35606 906 aa15.1■□□□□ 0.01
ABCD4-203ENST00000465085 KCTD2Q14681 263 aa15.1■□□□□ 0.01
ABCD4-203ENST00000465085 C9orf50Q5SZB4 431 aa15.1■□□□□ 0.01
ABCD4-203ENST00000465085 SAMD1Q6SPF0 538 aaPredicted RBP15.1■□□□□ 0.01
ABCD4-203ENST00000465085 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.1■□□□□ 0.01
ABCD4-203ENST00000465085 BADQ92934 168 aa15.1■□□□□ 0.01
ABCD4-203ENST00000465085 FERMT2Q96AC1 680 aa15.1■□□□□ 0.01
ABCD4-203ENST00000465085 TINF2Q9BSI4 451 aa15.1■□□□□ 0.01
ABCD4-203ENST00000465085 GOPCQ9HD26 462 aa15.1■□□□□ 0.01
ABCD4-203ENST00000465085 XPNPEP3Q9NQH7 507 aa15.1■□□□□ 0.01
ABCD4-203ENST00000465085 FBXO28Q9NVF7 368 aa15.1■□□□□ 0.01
ABCD4-203ENST00000465085 ZNF214Q9UL59 606 aaPredicted RBP15.1■□□□□ 0.01
ABCD4-203ENST00000465085 PPP1R9AQ9ULJ8 1098 aa15.1■□□□□ 0.01
ABCD4-203ENST00000465085 MCM3APO60318 1980 aa15.1■□□□□ 0.01
ABCD4-203ENST00000465085 SPTBN5Q9NRC6 3674 aaKnown RBP15.1■□□□□ 0.01
ABCD4-203ENST00000465085 TRIM43BA6NCK2 446 aa15.09■□□□□ 0.01
ABCD4-203ENST00000465085 VWA5AO00534 786 aa15.09■□□□□ 0.01
ABCD4-203ENST00000465085 PGK2P07205 417 aa15.09■□□□□ 0.01
ABCD4-203ENST00000465085 STAT3P40763 770 aa15.09■□□□□ 0.01
ABCD4-203ENST00000465085 TLE2Q04725 743 aa15.09■□□□□ 0.01
ABCD4-203ENST00000465085 ZNF792Q3KQV3 632 aa15.09■□□□□ 0.01
ABCD4-203ENST00000465085 SH3RF1Q7Z6J0 888 aa15.09■□□□□ 0.01
ABCD4-203ENST00000465085 REPS2Q8NFH8 660 aa15.09■□□□□ 0.01
ABCD4-203ENST00000465085 TRIM43Q96BQ3 446 aaPredicted RBP15.09■□□□□ 0.01
ABCD4-203ENST00000465085 FAM161BQ96MY7 647 aa15.09■□□□□ 0.01
ABCD4-203ENST00000465085 ARPP21Q9UBL0 812 aaPredicted RBP15.09■□□□□ 0.01
ABCD4-203ENST00000465085 SLC4A4Q9Y6R1 1079 aa15.09■□□□□ 0.01
ABCD4-203ENST00000465085 CHGBP05060 677 aa15.08■□□□□ 0
ABCD4-203ENST00000465085 SMAD3P84022 425 aaKnown RBP15.08■□□□□ 0
ABCD4-203ENST00000465085 ZSCAN25Q6NSZ9 544 aa15.08■□□□□ 0
ABCD4-203ENST00000465085 CTR9Q6PD62 1173 aa15.08■□□□□ 0
ABCD4-203ENST00000465085 RNF180Q86T96 592 aa15.08■□□□□ 0
ABCD4-203ENST00000465085 COL25A1Q9BXS0 654 aaPredicted RBP15.08■□□□□ 0
ABCD4-203ENST00000465085 BCL11AQ9H165 835 aa15.08■□□□□ 0
ABCD4-203ENST00000465085 COG6Q9Y2V7 657 aa15.08■□□□□ 0
ABCD4-203ENST00000465085 CLTBP09497 229 aa15.07■□□□□ 0
ABCD4-203ENST00000465085 ZNF865P0CJ78 1059 aaPredicted RBP15.07■□□□□ 0
ABCD4-203ENST00000465085 AKR1A1P14550 325 aa15.07■□□□□ 0
ABCD4-203ENST00000465085 FAM83BQ5T0W9 1011 aa15.07■□□□□ 0
ABCD4-203ENST00000465085 CDX2Q99626 313 aaPredicted RBP15.07■□□□□ 0
ABCD4-203ENST00000465085 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.07■□□□□ 0
ABCD4-203ENST00000465085 PUS7LQ9H0K6 701 aaKnown RBP15.07■□□□□ 0
ABCD4-203ENST00000465085 CHMP4BQ9H444 224 aaKnown RBP15.07■□□□□ 0
ABCD4-203ENST00000465085 TACC3Q9Y6A5 838 aa15.07■□□□□ 0
ABCD4-203ENST00000465085 A0A1W2PQ45 241 aaPredicted RBP15.06■□□□□ 0
ABCD4-203ENST00000465085 A0A1W2PQY0 241 aa15.06■□□□□ 0
ABCD4-203ENST00000465085 KIAA0355O15063 1070 aa15.06■□□□□ 0
ABCD4-203ENST00000465085 ADAMTS4O75173 837 aa15.06■□□□□ 0
ABCD4-203ENST00000465085 PGK1P00558 417 aa15.06■□□□□ 0
ABCD4-203ENST00000465085 TAL1P17542 331 aaPredicted RBP15.06■□□□□ 0
ABCD4-203ENST00000465085 MIER1Q8N108 512 aa15.06■□□□□ 0
ABCD4-203ENST00000465085 MSL3Q8N5Y2 521 aaKnown RBP15.06■□□□□ 0
ABCD4-203ENST00000465085 SLF1Q9BQI6 1058 aa15.06■□□□□ 0
ABCD4-203ENST00000465085 TEX13BQ9BXU2 312 aa15.06■□□□□ 0
ABCD4-203ENST00000465085 SEMA6BQ9H3T3 888 aa15.06■□□□□ 0
ABCD4-203ENST00000465085 CNPY2Q9Y2B0 182 aa15.06■□□□□ 0
ABCD4-203ENST00000465085 ITGB8P26012 769 aa15.05■□□□□ -0
ABCD4-203ENST00000465085 SBK1Q52WX2 424 aa15.05■□□□□ -0
ABCD4-203ENST00000465085 STRBPQ96SI9 672 aaKnown RBP15.05■□□□□ -0
ABCD4-203ENST00000465085 TSEN34Q9BSV6 310 aaKnown RBP15.05■□□□□ -0
ABCD4-203ENST00000465085 LRRCC1Q9C099 1032 aa15.05■□□□□ -0
ABCD4-203ENST00000465085 TTYH1Q9H313 450 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms