RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 ZNF18P17022 549 aa9.68□□□□□ -0.86
ACTB-208ENST00000464611 RXRAP19793 462 aa9.68□□□□□ -0.86
ACTB-208ENST00000464611 LMOD1P29536 600 aaPredicted RBP9.68□□□□□ -0.86
ACTB-208ENST00000464611 LONP1P36776 959 aaKnown RBP9.68□□□□□ -0.86
ACTB-208ENST00000464611 PPP4CP60510 307 aa9.68□□□□□ -0.86
ACTB-208ENST00000464611 TGFB2P61812 414 aa9.68□□□□□ -0.86
ACTB-208ENST00000464611 FUT2Q10981 343 aa9.68□□□□□ -0.86
ACTB-208ENST00000464611 PNOCQ13519 176 aa9.68□□□□□ -0.86
ACTB-208ENST00000464611 SPECC1LQ69YQ0 1117 aa9.68□□□□□ -0.86
ACTB-208ENST00000464611 SH3RF1Q7Z6J0 888 aa9.68□□□□□ -0.86
ACTB-208ENST00000464611 RAB11FIP4Q86YS3 637 aa9.68□□□□□ -0.86
ACTB-208ENST00000464611 CREBRFQ8IUR6 639 aa9.68□□□□□ -0.86
ACTB-208ENST00000464611 SLF2Q8IX21 1173 aa9.68□□□□□ -0.86
ACTB-208ENST00000464611 MIGA1Q8NAN2 632 aa9.68□□□□□ -0.86
ACTB-208ENST00000464611 RPGRQ92834 1020 aaKnown RBP9.68□□□□□ -0.86
ACTB-208ENST00000464611 PANX2Q96RD6 677 aa9.68□□□□□ -0.86
ACTB-208ENST00000464611 MAGEF1Q9HAY2 307 aa9.68□□□□□ -0.86
ACTB-208ENST00000464611 SENP2Q9HC62 589 aa9.68□□□□□ -0.86
ACTB-208ENST00000464611 GJB4Q9NTQ9 266 aa9.68□□□□□ -0.86
ACTB-208ENST00000464611 MAN1B1Q9UKM7 699 aa9.68□□□□□ -0.86
ACTB-208ENST00000464611 V9GY48 417 aaPredicted RBP9.68□□□□□ -0.86
ACTB-208ENST00000464611 DUOX1Q9NRD9 1551 aa9.67□□□□□ -0.86
ACTB-208ENST00000464611 USP17L12C9JPN9 530 aa9.67□□□□□ -0.86
ACTB-208ENST00000464611 USP17L21D6R901 530 aa9.67□□□□□ -0.86
ACTB-208ENST00000464611 H0YIN7 160 aa9.67□□□□□ -0.86
ACTB-208ENST00000464611 ACTN4O43707 911 aaKnown RBP9.67□□□□□ -0.86
ACTB-208ENST00000464611 PPFIA3O75145 1194 aa9.67□□□□□ -0.86
ACTB-208ENST00000464611 SCG2P13521 617 aa9.67□□□□□ -0.86
ACTB-208ENST00000464611 PLCG2P16885 1265 aa9.67□□□□□ -0.86
ACTB-208ENST00000464611 GYG1P46976 350 aa9.67□□□□□ -0.86
ACTB-208ENST00000464611 ATP2C1P98194 919 aaPredicted RBP9.67□□□□□ -0.86
ACTB-208ENST00000464611 TBX2Q13207 712 aaPredicted RBP9.67□□□□□ -0.86
ACTB-208ENST00000464611 TRIM14Q14142 442 aa9.67□□□□□ -0.86
ACTB-208ENST00000464611 PKN1Q16512 942 aa9.67□□□□□ -0.86
ACTB-208ENST00000464611 PFKFB3Q16875 520 aaPredicted RBP9.67□□□□□ -0.86
ACTB-208ENST00000464611 CRY2Q49AN0 593 aa9.67□□□□□ -0.86
ACTB-208ENST00000464611 TTC38Q5R3I4 469 aa9.67□□□□□ -0.86
ACTB-208ENST00000464611 E4F1Q66K89 784 aaPredicted RBP9.67□□□□□ -0.86
ACTB-208ENST00000464611 ARMCX5Q6P1M9 558 aa9.67□□□□□ -0.86
ACTB-208ENST00000464611 ZNF710Q8N1W2 664 aa9.67□□□□□ -0.86
ACTB-208ENST00000464611 ZNF397Q8NF99 534 aaPredicted RBP9.67□□□□□ -0.86
ACTB-208ENST00000464611 CCDC148Q8NFR7 591 aa9.67□□□□□ -0.86
ACTB-208ENST00000464611 CCDC12Q8WUD4 166 aaPredicted RBP9.67□□□□□ -0.86
ACTB-208ENST00000464611 PPP1R13BQ96KQ4 1090 aa9.67□□□□□ -0.86
ACTB-208ENST00000464611 CLIC6Q96NY7 704 aa9.67□□□□□ -0.86
ACTB-208ENST00000464611 MYL10Q9BUA6 226 aa9.67□□□□□ -0.86
ACTB-208ENST00000464611 CUEDC2Q9H467 287 aa9.67□□□□□ -0.86
ACTB-208ENST00000464611 DCP1AQ9NPI6 582 aaPredicted RBP9.67□□□□□ -0.86
ACTB-208ENST00000464611 FANCLQ9NW38 375 aa9.67□□□□□ -0.86
ACTB-208ENST00000464611 SERTAD1Q9UHV2 236 aa9.67□□□□□ -0.86
ACTB-208ENST00000464611 KCNJ14Q9UNX9 436 aa9.67□□□□□ -0.86
ACTB-208ENST00000464611 PCDHB6Q9Y5E3 794 aa9.67□□□□□ -0.86
ACTB-208ENST00000464611 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.67□□□□□ -0.86
ACTB-208ENST00000464611 BRCA1P38398 1863 aaKnown RBP9.67□□□□□ -0.86
ACTB-208ENST00000464611 CACNA1SQ13698 1873 aa9.67□□□□□ -0.86
ACTB-208ENST00000464611 LRRC37AA6NMS7 1700 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 LRRC10BA6NIK2 292 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 hCG_1984214I3L0E3 225 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 MAP3K13O43283 966 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 ATP8B1O43520 1251 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 NPR1P16066 1061 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 GUCY1A2P33402 732 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 NLRP5P59047 1200 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 MECOMQ03112 1051 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 NCBP1Q09161 790 aaKnown RBP9.66□□□□□ -0.86
ACTB-208ENST00000464611 NR1I3Q14994 352 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 IER5LQ5T953 404 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 HOMER1Q86YM7 354 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 C2CD5Q86YS7 1000 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 FOXP4Q8IVH2 680 aaPredicted RBP9.66□□□□□ -0.86
ACTB-208ENST00000464611 ZNF713Q8N859 430 aaPredicted RBP9.66□□□□□ -0.86
ACTB-208ENST00000464611 DAGLBQ8NCG7 672 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 SDR42E1Q8WUS8 393 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 ZNF592Q92610 1267 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 CCDC47Q96A33 483 aaKnown RBP9.66□□□□□ -0.86
ACTB-208ENST00000464611 MASTLQ96GX5 879 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 RBM17Q96I25 401 aaKnown RBP9.66□□□□□ -0.86
ACTB-208ENST00000464611 BAG1Q99933 345 aaPredicted RBP9.66□□□□□ -0.86
ACTB-208ENST00000464611 ZKSCAN3Q9BRR0 538 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 CSRNP2Q9H175 543 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 HSD3B7Q9H2F3 369 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 KAT14Q9H8E8 782 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 ARGLU1Q9NWB6 273 aaPredicted RBP9.66□□□□□ -0.86
ACTB-208ENST00000464611 TAOK2Q9UL54 1235 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 NFE2L3Q9Y4A8 694 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 TACC3Q9Y6A5 838 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 MYH6P13533 1939 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 CCDC88AQ3V6T2 1871 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 ECM29Q5VYK3 1845 aa9.66□□□□□ -0.86
ACTB-208ENST00000464611 MAST2Q6P0Q8 1798 aa9.65□□□□□ -0.86
ACTB-208ENST00000464611 ROBO3Q96MS0 1386 aa9.65□□□□□ -0.86
ACTB-208ENST00000464611 ITIH6Q6UXX5 1313 aa9.65□□□□□ -0.86
ACTB-208ENST00000464611 A0A1B0GTH6 734 aa9.65□□□□□ -0.86
ACTB-208ENST00000464611 KLRG2A4D1S0 409 aaPredicted RBP9.65□□□□□ -0.86
ACTB-208ENST00000464611 TSPY2A6NKD2 308 aa9.65□□□□□ -0.86
ACTB-208ENST00000464611 GTPBP6O43824 516 aaPredicted RBP9.65□□□□□ -0.86
ACTB-208ENST00000464611 TUBBP07437 444 aa9.65□□□□□ -0.86
ACTB-208ENST00000464611 PRKCSHP14314 528 aaPredicted RBP9.65□□□□□ -0.86
ACTB-208ENST00000464611 PRPHP41219 470 aa9.65□□□□□ -0.86
ACTB-208ENST00000464611 PPP4R3BQ5MIZ7 849 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms