RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 ITIH3Q06033 890 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 AKAP4Q5JQC9 854 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 WLSQ5T9L3 541 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 KRT40Q6A162 431 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 NCAPH2Q6IBW4 605 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 DDX46Q7L014 1031 aaKnown RBP12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 NCOA7Q8NI08 942 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 MAGEC3Q8TD91 643 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 AENQ8WTP8 325 aaKnown RBP12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 MIEF2Q96C03 454 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 MED15Q96RN5 788 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 JPH2Q9BR39 696 aaPredicted RBP12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 VEZTQ9HBM0 779 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 DDX21Q9NR30 783 aaKnown RBP eCLIP12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 ABHD10Q9NUJ1 306 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 RBM28Q9NW13 759 aaKnown RBP12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 PAG1Q9NWQ8 432 aa12.95□□□□□ -0.34
TNRC6A-205ENST00000464539 A0A0U1RQJ8 604 aa12.94□□□□□ -0.34
TNRC6A-205ENST00000464539 PTPREP23469 700 aa12.94□□□□□ -0.34
TNRC6A-205ENST00000464539 APBA1Q02410 837 aa12.94□□□□□ -0.34
TNRC6A-205ENST00000464539 PTPN12Q05209 780 aaKnown RBP12.94□□□□□ -0.34
TNRC6A-205ENST00000464539 SPAG1Q07617 926 aa12.94□□□□□ -0.34
TNRC6A-205ENST00000464539 TRIM29Q14134 588 aa12.94□□□□□ -0.34
TNRC6A-205ENST00000464539 CHST3Q7LGC8 479 aa12.94□□□□□ -0.34
TNRC6A-205ENST00000464539 MB21D2Q8IYB1 491 aaPredicted RBP12.94□□□□□ -0.34
TNRC6A-205ENST00000464539 USHBP1Q8N6Y0 703 aa12.94□□□□□ -0.34
TNRC6A-205ENST00000464539 ACRBPQ8NEB7 543 aa12.94□□□□□ -0.34
TNRC6A-205ENST00000464539 CPLX3Q8WVH0 158 aa12.94□□□□□ -0.34
TNRC6A-205ENST00000464539 ATRIPQ8WXE1 791 aa12.94□□□□□ -0.34
TNRC6A-205ENST00000464539 DBNDD2Q9BQY9 259 aa12.94□□□□□ -0.34
TNRC6A-205ENST00000464539 RNF181Q9P0P0 153 aa12.94□□□□□ -0.34
TNRC6A-205ENST00000464539 ANO9A1A5B4 782 aa12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 PPFIA3O75145 1194 aa12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 GYPCP04921 128 aa12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 NF2P35240 595 aa12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 MRPL12P52815 198 aaKnown RBP12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 CRYMQ14894 314 aa12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 RABL6Q3YEC7 729 aaPredicted RBP12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 HSP90AA4PQ58FG1 418 aa12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 ANKRD18AQ8IVF6 992 aa12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 ZKSCAN4Q969J2 545 aaPredicted RBP12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 LGR6Q9HBX8 967 aa12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 SERTAD1Q9UHV2 236 aa12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 EPN1Q9Y6I3 576 aaPredicted RBP12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 NDUFAB1O14561 156 aa12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 CYP27B1O15528 508 aa12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 KCNQ3O43525 872 aa12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 IGKV5-2P06315 115 aa12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 GCFC2P16383 781 aaKnown RBP12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 ERVK-24P63145 666 aa12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 GCKRQ14397 625 aa12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 FMNL3Q8IVF7 1028 aa12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 TRMT44Q8IYL2 757 aaKnown RBP12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 MMGT1Q8N4V1 131 aa12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 RIN2Q8WYP3 895 aaPredicted RBP12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 PIGBQ92521 554 aa12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 MMS19Q96T76 1030 aa12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 NBPF3Q9H094 633 aa12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 LIMA1Q9UHB6 759 aaKnown RBP12.93□□□□□ -0.34
TNRC6A-205ENST00000464539 ARFGEF1Q9Y6D6 1849 aa12.92□□□□□ -0.34
TNRC6A-205ENST00000464539 NEURL1BA8MQ27 555 aa12.92□□□□□ -0.34
TNRC6A-205ENST00000464539 FOXN1O15353 648 aa12.92□□□□□ -0.34
TNRC6A-205ENST00000464539 FXR1P51114 621 aaKnown RBP eCLIP12.92□□□□□ -0.34
TNRC6A-205ENST00000464539 KRT83P78385 493 aa12.92□□□□□ -0.34
TNRC6A-205ENST00000464539 CUL4BQ13620 913 aa12.92□□□□□ -0.34
TNRC6A-205ENST00000464539 SKIDA1Q1XH10 827 aa12.92□□□□□ -0.34
TNRC6A-205ENST00000464539 RALYLQ86SE5 291 aaKnown RBP12.92□□□□□ -0.34
TNRC6A-205ENST00000464539 C1orf131Q8NDD1 294 aaKnown RBP12.92□□□□□ -0.34
TNRC6A-205ENST00000464539 KLHDC4Q8TBB5 520 aa12.92□□□□□ -0.34
TNRC6A-205ENST00000464539 DCAF5Q96JK2 942 aa12.92□□□□□ -0.34
TNRC6A-205ENST00000464539 KLC4Q9NSK0 619 aa12.92□□□□□ -0.34
TNRC6A-205ENST00000464539 PIM2Q9P1W9 311 aa12.92□□□□□ -0.34
TNRC6A-205ENST00000464539 PCDH10Q9P2E7 1040 aa12.92□□□□□ -0.34
TNRC6A-205ENST00000464539 CEP131Q9UPN4 1083 aa12.92□□□□□ -0.34
TNRC6A-205ENST00000464539 ITGB4P16144 1822 aa12.92□□□□□ -0.34
TNRC6A-205ENST00000464539 MAST3O60307 1309 aa12.92□□□□□ -0.34
TNRC6A-205ENST00000464539 BRCA1P38398 1863 aaKnown RBP12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 POLR2DO15514 142 aaKnown RBP12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 NDUFA10O95299 355 aa12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 ZFYP08048 801 aaPredicted RBP12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 ACTN3Q08043 901 aaPredicted RBP12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 NNTQ13423 1086 aa12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 WASHC4Q2M389 1173 aa12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 LRCH2Q5VUJ6 765 aa12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 EMBQ6PCB8 327 aa12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 ZNF572Q7Z3I7 529 aaPredicted RBP12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 RIC3Q7Z5B4 369 aa12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 TAX1BP1Q86VP1 789 aa12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 WASF1Q92558 559 aa12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 VCPKMTQ9H867 229 aa12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 ACTR5Q9H9F9 607 aaPredicted RBP12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 C4AP0C0L4 1744 aa12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 SYNRGQ9UMZ2 1314 aa12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 GOLIM4O00461 696 aa12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 ACTN4O43707 911 aaKnown RBP12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 RASSF9O75901 435 aa12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 CHGBP05060 677 aa12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 TNFRSF8P28908 595 aa12.91□□□□□ -0.34
TNRC6A-205ENST00000464539 ITPK1Q13572 414 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms