RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 CCDC34Q96HJ3 373 aa23.19■■□□□ 1.3
TUBGCP3-204ENST00000464139 MAP7D2Q96T17 732 aa23.19■■□□□ 1.3
TUBGCP3-204ENST00000464139 ARID3AQ99856 593 aa23.19■■□□□ 1.3
TUBGCP3-204ENST00000464139 KCND1Q9NSA2 647 aa23.19■■□□□ 1.3
TUBGCP3-204ENST00000464139 TCP11L1Q9NUJ3 509 aa23.19■■□□□ 1.3
TUBGCP3-204ENST00000464139 C6orf229H3BNL8 230 aa23.19■■□□□ 1.3
TUBGCP3-204ENST00000464139 CTIFO43310 598 aaKnown RBP23.19■■□□□ 1.3
TUBGCP3-204ENST00000464139 CDK8P49336 464 aa23.19■■□□□ 1.3
TUBGCP3-204ENST00000464139 CCDC112Q8NEF3 446 aa23.19■■□□□ 1.3
TUBGCP3-204ENST00000464139 CPVLQ9H3G5 476 aa23.19■■□□□ 1.3
TUBGCP3-204ENST00000464139 PCDHA4Q9UN74 947 aa23.19■■□□□ 1.3
TUBGCP3-204ENST00000464139 CDK5RAP2Q96SN8 1893 aa23.18■■□□□ 1.3
TUBGCP3-204ENST00000464139 BBOX1O75936 387 aa23.18■■□□□ 1.3
TUBGCP3-204ENST00000464139 KLHL10Q6JEL2 608 aa23.18■■□□□ 1.3
TUBGCP3-204ENST00000464139 SMYD4Q8IYR2 804 aaPredicted RBP23.18■■□□□ 1.3
TUBGCP3-204ENST00000464139 CD44P16070 742 aaKnown RBP23.18■■□□□ 1.3
TUBGCP3-204ENST00000464139 DPYDQ12882 1025 aa23.18■■□□□ 1.3
TUBGCP3-204ENST00000464139 CCDC178Q5BJE1 867 aa23.18■■□□□ 1.3
TUBGCP3-204ENST00000464139 WWC2Q6AWC2 1192 aa23.18■■□□□ 1.3
TUBGCP3-204ENST00000464139 TRIM37O94972 964 aa23.17■■□□□ 1.3
TUBGCP3-204ENST00000464139 GNAQP50148 359 aa23.17■■□□□ 1.3
TUBGCP3-204ENST00000464139 STX17P56962 302 aa23.17■■□□□ 1.3
TUBGCP3-204ENST00000464139 HEATR3Q7Z4Q2 680 aa23.17■■□□□ 1.3
TUBGCP3-204ENST00000464139 EYA3Q99504 573 aa23.17■■□□□ 1.3
TUBGCP3-204ENST00000464139 SH3GLB2Q9NR46 395 aa23.17■■□□□ 1.3
TUBGCP3-204ENST00000464139 FLT1P17948 1338 aa23.17■■□□□ 1.3
TUBGCP3-204ENST00000464139 NRDCO43847 1150 aa23.17■■□□□ 1.3
TUBGCP3-204ENST00000464139 CDC25AP30304 524 aa23.17■■□□□ 1.3
TUBGCP3-204ENST00000464139 PPP1R13BQ96KQ4 1090 aa23.17■■□□□ 1.3
TUBGCP3-204ENST00000464139 BLZF1Q9H2G9 400 aa23.17■■□□□ 1.3
TUBGCP3-204ENST00000464139 NT5C2P49902 561 aa23.16■■□□□ 1.3
TUBGCP3-204ENST00000464139 RHBDL3P58872 404 aa23.16■■□□□ 1.3
TUBGCP3-204ENST00000464139 DHX8Q14562 1220 aaKnown RBP23.16■■□□□ 1.3
TUBGCP3-204ENST00000464139 E2F4Q16254 413 aa23.16■■□□□ 1.3
TUBGCP3-204ENST00000464139 PALM3A6NDB9 673 aaPredicted RBP23.16■■□□□ 1.3
TUBGCP3-204ENST00000464139 POLRMTO00411 1230 aaKnown RBP23.16■■□□□ 1.3
TUBGCP3-204ENST00000464139 ERCC5P28715 1186 aaPredicted RBP23.16■■□□□ 1.3
TUBGCP3-204ENST00000464139 C16orf86Q6ZW13 317 aa23.16■■□□□ 1.3
TUBGCP3-204ENST00000464139 C4orf32Q8N8J7 132 aa23.16■■□□□ 1.3
TUBGCP3-204ENST00000464139 PODXL2Q9NZ53 605 aa23.16■■□□□ 1.3
TUBGCP3-204ENST00000464139 HOXA10P31260 410 aaPredicted RBP23.15■■□□□ 1.3
TUBGCP3-204ENST00000464139 MTERF4Q7Z6M4 381 aaKnown RBP23.15■■□□□ 1.3
TUBGCP3-204ENST00000464139 SNED1Q8TER0 1413 aa23.15■■□□□ 1.3
TUBGCP3-204ENST00000464139 KLRF2D3W0D1 207 aa23.15■■□□□ 1.3
TUBGCP3-204ENST00000464139 RIMBP2O15034 1052 aa23.15■■□□□ 1.3
TUBGCP3-204ENST00000464139 IQUBQ8NA54 791 aa23.15■■□□□ 1.3
TUBGCP3-204ENST00000464139 QTRT2Q9H974 415 aaKnown RBP23.15■■□□□ 1.3
TUBGCP3-204ENST00000464139 ZNF287Q9HBT7 754 aa23.15■■□□□ 1.3
TUBGCP3-204ENST00000464139 PCDHA6Q9UN73 950 aa23.15■■□□□ 1.3
TUBGCP3-204ENST00000464139 PCDHA8Q9Y5H6 950 aa23.15■■□□□ 1.3
TUBGCP3-204ENST00000464139 CCDC194A0A1B0GVG4 234 aa23.14■■□□□ 1.29
TUBGCP3-204ENST00000464139 M0R2N6 131 aa23.14■■□□□ 1.29
TUBGCP3-204ENST00000464139 GTF2IP78347 998 aa23.14■■□□□ 1.29
TUBGCP3-204ENST00000464139 SLC27A3Q5K4L6 730 aa23.14■■□□□ 1.29
TUBGCP3-204ENST00000464139 GSDMAQ96QA5 445 aa23.14■■□□□ 1.29
TUBGCP3-204ENST00000464139 PSDA5PKW4 1024 aaPredicted RBP23.14■■□□□ 1.29
TUBGCP3-204ENST00000464139 STXBP3O00186 592 aa23.14■■□□□ 1.29
TUBGCP3-204ENST00000464139 CUL4BQ13620 913 aa23.14■■□□□ 1.29
TUBGCP3-204ENST00000464139 MTRQ99707 1265 aa23.14■■□□□ 1.29
TUBGCP3-204ENST00000464139 DDX60LQ5H9U9 1706 aaKnown RBP23.14■■□□□ 1.29
TUBGCP3-204ENST00000464139 NAA30Q147X3 362 aaPredicted RBP23.13■■□□□ 1.29
TUBGCP3-204ENST00000464139 INF2Q27J81 1249 aa23.13■■□□□ 1.29
TUBGCP3-204ENST00000464139 PDXDC2PQ6P474 469 aa23.13■■□□□ 1.29
TUBGCP3-204ENST00000464139 CERS3Q8IU89 383 aa23.13■■□□□ 1.29
TUBGCP3-204ENST00000464139 CRAMP1Q96RY5 1269 aa23.13■■□□□ 1.29
TUBGCP3-204ENST00000464139 TMX1Q9H3N1 280 aa23.13■■□□□ 1.29
TUBGCP3-204ENST00000464139 BARHL2Q9NY43 387 aa23.13■■□□□ 1.29
TUBGCP3-204ENST00000464139 GOLGB1Q14789 3259 aaKnown RBP23.13■■□□□ 1.29
TUBGCP3-204ENST00000464139 COBLO75128 1261 aa23.13■■□□□ 1.29
TUBGCP3-204ENST00000464139 PLCG2P16885 1265 aa23.13■■□□□ 1.29
TUBGCP3-204ENST00000464139 KCNJ6P48051 423 aa23.13■■□□□ 1.29
TUBGCP3-204ENST00000464139 USP17L2Q6R6M4 530 aa23.13■■□□□ 1.29
TUBGCP3-204ENST00000464139 NEDD1Q8NHV4 660 aa23.13■■□□□ 1.29
TUBGCP3-204ENST00000464139 FAM163AQ96GL9 167 aaPredicted RBP23.13■■□□□ 1.29
TUBGCP3-204ENST00000464139 PPP1R3GB7ZBB8 358 aa23.12■■□□□ 1.29
TUBGCP3-204ENST00000464139 TBX2Q13207 712 aaPredicted RBP23.12■■□□□ 1.29
TUBGCP3-204ENST00000464139 ARL6IP4Q66PJ3 421 aaKnown RBP23.12■■□□□ 1.29
TUBGCP3-204ENST00000464139 SYNRGQ9UMZ2 1314 aa23.12■■□□□ 1.29
TUBGCP3-204ENST00000464139 F8W031 263 aaPredicted RBP23.11■■□□□ 1.29
TUBGCP3-204ENST00000464139 SPATA1Q5VX52 437 aa23.11■■□□□ 1.29
TUBGCP3-204ENST00000464139 AEBP2Q6ZN18 517 aaPredicted RBP23.11■■□□□ 1.29
TUBGCP3-204ENST00000464139 CCDC148Q8NFR7 591 aa23.11■■□□□ 1.29
TUBGCP3-204ENST00000464139 KIF18AQ8NI77 898 aa23.11■■□□□ 1.29
TUBGCP3-204ENST00000464139 TBC1D22AQ8WUA7 517 aa23.11■■□□□ 1.29
TUBGCP3-204ENST00000464139 CEP95Q96GE4 821 aa23.11■■□□□ 1.29
TUBGCP3-204ENST00000464139 TMEM60Q9H2L4 133 aa23.11■■□□□ 1.29
TUBGCP3-204ENST00000464139 MYH1P12882 1939 aa23.11■■□□□ 1.29
TUBGCP3-204ENST00000464139 GAKO14976 1311 aa23.11■■□□□ 1.29
TUBGCP3-204ENST00000464139 SPECC1LQ69YQ0 1117 aa23.11■■□□□ 1.29
TUBGCP3-204ENST00000464139 HOMER1Q86YM7 354 aa23.11■■□□□ 1.29
TUBGCP3-204ENST00000464139 DAGLAQ9Y4D2 1042 aa23.11■■□□□ 1.29
TUBGCP3-204ENST00000464139 PPEF1O14829 653 aaPredicted RBP23.1■■□□□ 1.29
TUBGCP3-204ENST00000464139 LONP1P36776 959 aaKnown RBP23.1■■□□□ 1.29
TUBGCP3-204ENST00000464139 ADKP55263 362 aaKnown RBP23.1■■□□□ 1.29
TUBGCP3-204ENST00000464139 NCBP1Q09161 790 aaKnown RBP23.1■■□□□ 1.29
TUBGCP3-204ENST00000464139 PICALMQ13492 652 aa23.1■■□□□ 1.29
TUBGCP3-204ENST00000464139 KARSQ15046 597 aaKnown RBP23.1■■□□□ 1.29
TUBGCP3-204ENST00000464139 SLF2Q8IX21 1173 aa23.1■■□□□ 1.29
TUBGCP3-204ENST00000464139 PROM2Q8N271 834 aa23.1■■□□□ 1.29
TUBGCP3-204ENST00000464139 VAT1LQ9HCJ6 419 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms