RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 ADCYAP1R1P41586 468 aa18.41■□□□□ 0.54
CMSS1-202ENST00000463526 CTR9Q6PD62 1173 aa18.41■□□□□ 0.54
CMSS1-202ENST00000463526 MAML3Q96JK9 1138 aa18.41■□□□□ 0.54
CMSS1-202ENST00000463526 FAM161BQ96MY7 647 aa18.41■□□□□ 0.54
CMSS1-202ENST00000463526 MMP19Q99542 508 aa18.41■□□□□ 0.54
CMSS1-202ENST00000463526 PUS7LQ9H0K6 701 aaKnown RBP18.41■□□□□ 0.54
CMSS1-202ENST00000463526 STXBP5LQ9Y2K9 1186 aa18.41■□□□□ 0.54
CMSS1-202ENST00000463526 COL6A3P12111 3177 aa18.41■□□□□ 0.54
CMSS1-202ENST00000463526 TRIM60Q495X7 471 aa18.4■□□□□ 0.54
CMSS1-202ENST00000463526 FAM47AQ5JRC9 791 aa18.4■□□□□ 0.54
CMSS1-202ENST00000463526 FAM83BQ5T0W9 1011 aa18.4■□□□□ 0.54
CMSS1-202ENST00000463526 ABRAQ8N0Z2 381 aa18.4■□□□□ 0.54
CMSS1-202ENST00000463526 LRRCC1Q9C099 1032 aa18.4■□□□□ 0.54
CMSS1-202ENST00000463526 CHMP4BQ9H444 224 aaKnown RBP18.4■□□□□ 0.54
CMSS1-202ENST00000463526 KANSL2Q9H9L4 492 aa18.4■□□□□ 0.54
CMSS1-202ENST00000463526 SLC25A27O95847 323 aa18.39■□□□□ 0.53
CMSS1-202ENST00000463526 STAT3P40763 770 aa18.39■□□□□ 0.53
CMSS1-202ENST00000463526 LRRC41Q15345 812 aa18.39■□□□□ 0.53
CMSS1-202ENST00000463526 ZSCAN25Q6NSZ9 544 aa18.39■□□□□ 0.53
CMSS1-202ENST00000463526 GOPCQ9HD26 462 aa18.39■□□□□ 0.53
CMSS1-202ENST00000463526 FRMPD3Q5JV73 1810 aa18.39■□□□□ 0.53
CMSS1-202ENST00000463526 SLC4A3P48751 1232 aa18.38■□□□□ 0.53
CMSS1-202ENST00000463526 KCTD2Q14681 263 aa18.38■□□□□ 0.53
CMSS1-202ENST00000463526 C20orf194Q5TEA3 1177 aa18.38■□□□□ 0.53
CMSS1-202ENST00000463526 RIOX2Q8IUF8 465 aa18.38■□□□□ 0.53
CMSS1-202ENST00000463526 NUP88Q99567 741 aaPredicted RBP18.38■□□□□ 0.53
CMSS1-202ENST00000463526 RCAN3Q9UKA8 241 aa18.38■□□□□ 0.53
CMSS1-202ENST00000463526 PPP1R9AQ9ULJ8 1098 aa18.38■□□□□ 0.53
CMSS1-202ENST00000463526 RLFQ13129 1914 aa18.38■□□□□ 0.53
CMSS1-202ENST00000463526 BAZ2AQ9UIF9 1905 aaKnown RBP18.38■□□□□ 0.53
CMSS1-202ENST00000463526 DNAH12Q6ZR08 3092 aa18.37■□□□□ 0.53
CMSS1-202ENST00000463526 MINDY4BA8MYZ0 360 aa18.37■□□□□ 0.53
CMSS1-202ENST00000463526 VWA5AO00534 786 aa18.37■□□□□ 0.53
CMSS1-202ENST00000463526 TAL1P17542 331 aaPredicted RBP18.37■□□□□ 0.53
CMSS1-202ENST00000463526 SHHQ15465 462 aa18.37■□□□□ 0.53
CMSS1-202ENST00000463526 SH3RF1Q7Z6J0 888 aa18.37■□□□□ 0.53
CMSS1-202ENST00000463526 BADQ92934 168 aa18.37■□□□□ 0.53
CMSS1-202ENST00000463526 ADAMTS5Q9UNA0 930 aa18.37■□□□□ 0.53
CMSS1-202ENST00000463526 POTEB2H3BUK9 544 aa18.36■□□□□ 0.53
CMSS1-202ENST00000463526 PGK1P00558 417 aa18.36■□□□□ 0.53
CMSS1-202ENST00000463526 RARBP10826 455 aa18.36■□□□□ 0.53
CMSS1-202ENST00000463526 C9orf50Q5SZB4 431 aa18.36■□□□□ 0.53
CMSS1-202ENST00000463526 STRBPQ96SI9 672 aaKnown RBP18.36■□□□□ 0.53
CMSS1-202ENST00000463526 TINF2Q9BSI4 451 aa18.36■□□□□ 0.53
CMSS1-202ENST00000463526 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.36■□□□□ 0.53
CMSS1-202ENST00000463526 MKNK2Q9HBH9 465 aa18.36■□□□□ 0.53
CMSS1-202ENST00000463526 XPNPEP3Q9NQH7 507 aa18.36■□□□□ 0.53
CMSS1-202ENST00000463526 ARPP21Q9UBL0 812 aaPredicted RBP18.36■□□□□ 0.53
CMSS1-202ENST00000463526 TLE2Q04725 743 aa18.35■□□□□ 0.53
CMSS1-202ENST00000463526 ZNF792Q3KQV3 632 aa18.35■□□□□ 0.53
CMSS1-202ENST00000463526 TSHZ3Q63HK5 1081 aa18.35■□□□□ 0.53
CMSS1-202ENST00000463526 LENG1Q96BZ8 264 aaPredicted RBP18.35■□□□□ 0.53
CMSS1-202ENST00000463526 GUCD1Q96NT3 240 aa18.35■□□□□ 0.53
CMSS1-202ENST00000463526 PDLIM7Q9NR12 457 aa18.35■□□□□ 0.53
CMSS1-202ENST00000463526 ECHDC1Q9NTX5 307 aa18.35■□□□□ 0.53
CMSS1-202ENST00000463526 ZNF236Q9UL36 1845 aa18.35■□□□□ 0.53
CMSS1-202ENST00000463526 A0A0G2JMZ2 1700 aa18.35■□□□□ 0.53
CMSS1-202ENST00000463526 A0A0C4DFX4 3053 aa18.34■□□□□ 0.53
CMSS1-202ENST00000463526 TRIM43BA6NCK2 446 aa18.34■□□□□ 0.53
CMSS1-202ENST00000463526 GSG1L2A8MUP6 293 aa18.34■□□□□ 0.53
CMSS1-202ENST00000463526 RASA1P20936 1047 aa18.34■□□□□ 0.53
CMSS1-202ENST00000463526 REPS2Q8NFH8 660 aa18.34■□□□□ 0.53
CMSS1-202ENST00000463526 TRIM43Q96BQ3 446 aaPredicted RBP18.34■□□□□ 0.53
CMSS1-202ENST00000463526 SLF1Q9BQI6 1058 aa18.34■□□□□ 0.53
CMSS1-202ENST00000463526 ZNF214Q9UL59 606 aaPredicted RBP18.34■□□□□ 0.53
CMSS1-202ENST00000463526 MYH8P13535 1937 aa18.33■□□□□ 0.53
CMSS1-202ENST00000463526 F5H6K3 240 aa18.33■□□□□ 0.52
CMSS1-202ENST00000463526 KLRC3Q07444 240 aa18.33■□□□□ 0.52
CMSS1-202ENST00000463526 SNX17Q15036 470 aa18.33■□□□□ 0.52
CMSS1-202ENST00000463526 ZNF697Q5TEC3 545 aa18.33■□□□□ 0.52
CMSS1-202ENST00000463526 FAM109BQ6ICB4 259 aaPredicted RBP18.33■□□□□ 0.52
CMSS1-202ENST00000463526 SNRNP48Q6IEG0 339 aaKnown RBP18.33■□□□□ 0.52
CMSS1-202ENST00000463526 RNF180Q86T96 592 aa18.33■□□□□ 0.52
CMSS1-202ENST00000463526 CPXCR1Q8N123 301 aa18.33■□□□□ 0.52
CMSS1-202ENST00000463526 OSBP2Q969R2 916 aa18.33■□□□□ 0.52
CMSS1-202ENST00000463526 CLIP2Q9UDT6 1046 aa18.33■□□□□ 0.52
CMSS1-202ENST00000463526 NRBP1Q9UHY1 535 aa18.33■□□□□ 0.52
CMSS1-202ENST00000463526 PHF24Q9UPV7 400 aa18.33■□□□□ 0.52
CMSS1-202ENST00000463526 CTDP1Q9Y5B0 961 aaPredicted RBP18.33■□□□□ 0.52
CMSS1-202ENST00000463526 PRDM1O75626 825 aa18.32■□□□□ 0.52
CMSS1-202ENST00000463526 NDUFB10O96000 172 aa18.32■□□□□ 0.52
CMSS1-202ENST00000463526 APPP05067 770 aa18.32■□□□□ 0.52
CMSS1-202ENST00000463526 ZNF865P0CJ78 1059 aaPredicted RBP18.32■□□□□ 0.52
CMSS1-202ENST00000463526 COPB2P35606 906 aa18.32■□□□□ 0.52
CMSS1-202ENST00000463526 SBK1Q52WX2 424 aa18.32■□□□□ 0.52
CMSS1-202ENST00000463526 KBTBD3Q8NAB2 608 aa18.32■□□□□ 0.52
CMSS1-202ENST00000463526 DDX11Q96FC9 970 aa18.32■□□□□ 0.52
CMSS1-202ENST00000463526 NYAP2Q9P242 653 aa18.32■□□□□ 0.52
CMSS1-202ENST00000463526 CNPY2Q9Y2B0 182 aa18.32■□□□□ 0.52
CMSS1-202ENST00000463526 DIS3Q9Y2L1 958 aaKnown RBP18.32■□□□□ 0.52
CMSS1-202ENST00000463526 RIPK3Q9Y572 518 aa18.32■□□□□ 0.52
CMSS1-202ENST00000463526 SMCHD1A6NHR9 2005 aa18.32■□□□□ 0.52
CMSS1-202ENST00000463526 RNF113AO15541 343 aaKnown RBP18.31■□□□□ 0.52
CMSS1-202ENST00000463526 PQBP1O60828 265 aaKnown RBP18.31■□□□□ 0.52
CMSS1-202ENST00000463526 AKR1A1P14550 325 aa18.31■□□□□ 0.52
CMSS1-202ENST00000463526 TDO2P48775 406 aa18.31■□□□□ 0.52
CMSS1-202ENST00000463526 ZNF444Q8N0Y2 327 aaPredicted RBP18.31■□□□□ 0.52
CMSS1-202ENST00000463526 APPBP2Q92624 585 aa18.31■□□□□ 0.52
CMSS1-202ENST00000463526 TEX13BQ9BXU2 312 aa18.31■□□□□ 0.52
CMSS1-202ENST00000463526 ZHX1Q9UKY1 873 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms