RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 PRKAG2Q9UGJ0 569 aa27.91■■■□□ 2.06
SSNA1-203ENST00000463511 ATP11BQ9Y2G3 1177 aa27.91■■■□□ 2.06
SSNA1-203ENST00000463511 USP17L12C9JPN9 530 aa27.9■■■□□ 2.06
SSNA1-203ENST00000463511 KBTBD13C9JR72 458 aa27.9■■■□□ 2.06
SSNA1-203ENST00000463511 USP17L21D6R901 530 aa27.9■■■□□ 2.06
SSNA1-203ENST00000463511 WDR46O15213 610 aaKnown RBP27.9■■■□□ 2.06
SSNA1-203ENST00000463511 SEPT4O43236 478 aa27.9■■■□□ 2.06
SSNA1-203ENST00000463511 MYCNP04198 464 aaPredicted RBP27.9■■■□□ 2.06
SSNA1-203ENST00000463511 PRAMEF19Q5SWL8 479 aa27.9■■■□□ 2.06
SSNA1-203ENST00000463511 AMOTL1Q8IY63 956 aa27.9■■■□□ 2.06
SSNA1-203ENST00000463511 EXOC6Q8TAG9 804 aa27.9■■■□□ 2.06
SSNA1-203ENST00000463511 CCDC17Q96LX7 622 aa27.9■■■□□ 2.06
SSNA1-203ENST00000463511 HAUS7Q99871 368 aa27.9■■■□□ 2.06
SSNA1-203ENST00000463511 UNC80Q8N2C7 3258 aa27.9■■■□□ 2.06
SSNA1-203ENST00000463511 MYH4Q9Y623 1939 aa27.9■■■□□ 2.06
SSNA1-203ENST00000463511 IRX6P78412 446 aaPredicted RBP27.89■■■□□ 2.06
SSNA1-203ENST00000463511 C16orf86Q6ZW13 317 aa27.89■■■□□ 2.06
SSNA1-203ENST00000463511 ABRAQ8N0Z2 381 aa27.89■■■□□ 2.06
SSNA1-203ENST00000463511 TMEM132BQ14DG7 1078 aa27.88■■■□□ 2.05
SSNA1-203ENST00000463511 MAML3Q96JK9 1138 aa27.88■■■□□ 2.05
SSNA1-203ENST00000463511 FBXO28Q9NVF7 368 aa27.88■■■□□ 2.05
SSNA1-203ENST00000463511 CUL9Q8IWT3 2517 aa27.87■■■□□ 2.05
SSNA1-203ENST00000463511 FCER1AP12319 257 aa27.87■■■□□ 2.05
SSNA1-203ENST00000463511 EEF2P13639 858 aaKnown RBP27.87■■■□□ 2.05
SSNA1-203ENST00000463511 SLC39A5Q6ZMH5 540 aa27.87■■■□□ 2.05
SSNA1-203ENST00000463511 DDRGK1Q96HY6 314 aa27.87■■■□□ 2.05
SSNA1-203ENST00000463511 SLC4A4Q9Y6R1 1079 aa27.87■■■□□ 2.05
SSNA1-203ENST00000463511 UBE3CQ15386 1083 aa27.86■■■□□ 2.05
SSNA1-203ENST00000463511 PCDHB15Q9Y5E8 787 aa27.86■■■□□ 2.05
SSNA1-203ENST00000463511 FAM47AQ5JRC9 791 aa27.85■■■□□ 2.05
SSNA1-203ENST00000463511 PRDM5Q9NQX1 630 aaPredicted RBP27.85■■■□□ 2.05
SSNA1-203ENST00000463511 RAD21O60216 631 aa27.84■■■□□ 2.05
SSNA1-203ENST00000463511 SLC25A27O95847 323 aa27.84■■■□□ 2.05
SSNA1-203ENST00000463511 ADCYAP1R1P41586 468 aa27.84■■■□□ 2.05
SSNA1-203ENST00000463511 LRRC41Q15345 812 aa27.84■■■□□ 2.05
SSNA1-203ENST00000463511 TRIM60Q495X7 471 aa27.84■■■□□ 2.05
SSNA1-203ENST00000463511 CTR9Q6PD62 1173 aa27.84■■■□□ 2.05
SSNA1-203ENST00000463511 MMP19Q99542 508 aa27.84■■■□□ 2.05
SSNA1-203ENST00000463511 PUS7LQ9H0K6 701 aaKnown RBP27.84■■■□□ 2.05
SSNA1-203ENST00000463511 KANSL2Q9H9L4 492 aa27.84■■■□□ 2.05
SSNA1-203ENST00000463511 GOPCQ9HD26 462 aa27.84■■■□□ 2.05
SSNA1-203ENST00000463511 ADAMTS5Q9UNA0 930 aa27.84■■■□□ 2.05
SSNA1-203ENST00000463511 PGK2P07205 417 aa27.83■■■□□ 2.05
SSNA1-203ENST00000463511 AAMPQ13685 434 aa27.83■■■□□ 2.05
SSNA1-203ENST00000463511 SNX17Q15036 470 aa27.83■■■□□ 2.05
SSNA1-203ENST00000463511 FERMT2Q96AC1 680 aa27.83■■■□□ 2.05
SSNA1-203ENST00000463511 POTEB2H3BUK9 544 aa27.82■■■□□ 2.04
SSNA1-203ENST00000463511 SMARCA5O60264 1052 aaPredicted RBP27.82■■■□□ 2.04
SSNA1-203ENST00000463511 FAM83BQ5T0W9 1011 aa27.82■■■□□ 2.04
SSNA1-203ENST00000463511 RIOX2Q8IUF8 465 aa27.82■■■□□ 2.04
SSNA1-203ENST00000463511 LRRCC1Q9C099 1032 aa27.82■■■□□ 2.04
SSNA1-203ENST00000463511 MCM3APO60318 1980 aa27.82■■■□□ 2.04
SSNA1-203ENST00000463511 VWA5AO00534 786 aa27.81■■■□□ 2.04
SSNA1-203ENST00000463511 ZSCAN25Q6NSZ9 544 aa27.81■■■□□ 2.04
SSNA1-203ENST00000463511 FAM161BQ96MY7 647 aa27.81■■■□□ 2.04
SSNA1-203ENST00000463511 PPP1R9AQ9ULJ8 1098 aa27.81■■■□□ 2.04
SSNA1-203ENST00000463511 EYSQ5T1H1 3165 aa27.8■■■□□ 2.04
SSNA1-203ENST00000463511 FAM109BQ6ICB4 259 aaPredicted RBP27.8■■■□□ 2.04
SSNA1-203ENST00000463511 GUCD1Q96NT3 240 aa27.8■■■□□ 2.04
SSNA1-203ENST00000463511 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.8■■■□□ 2.04
SSNA1-203ENST00000463511 XPNPEP3Q9NQH7 507 aa27.8■■■□□ 2.04
SSNA1-203ENST00000463511 PDLIM7Q9NR12 457 aa27.8■■■□□ 2.04
SSNA1-203ENST00000463511 ARPP21Q9UBL0 812 aaPredicted RBP27.8■■■□□ 2.04
SSNA1-203ENST00000463511 ZNF214Q9UL59 606 aaPredicted RBP27.8■■■□□ 2.04
SSNA1-203ENST00000463511 RARBP10826 455 aa27.79■■■□□ 2.04
SSNA1-203ENST00000463511 STAT3P40763 770 aa27.79■■■□□ 2.04
SSNA1-203ENST00000463511 KCTD2Q14681 263 aa27.79■■■□□ 2.04
SSNA1-203ENST00000463511 BADQ92934 168 aa27.79■■■□□ 2.04
SSNA1-203ENST00000463511 TINF2Q9BSI4 451 aa27.79■■■□□ 2.04
SSNA1-203ENST00000463511 NRBP1Q9UHY1 535 aa27.79■■■□□ 2.04
SSNA1-203ENST00000463511 SHHQ15465 462 aa27.78■■■□□ 2.04
SSNA1-203ENST00000463511 C9orf50Q5SZB4 431 aa27.78■■■□□ 2.04
SSNA1-203ENST00000463511 SH3RF1Q7Z6J0 888 aa27.78■■■□□ 2.04
SSNA1-203ENST00000463511 STK11IPQ8N1F8 1099 aa27.78■■■□□ 2.04
SSNA1-203ENST00000463511 REPS2Q8NFH8 660 aa27.78■■■□□ 2.04
SSNA1-203ENST00000463511 NUP88Q99567 741 aaPredicted RBP27.78■■■□□ 2.04
SSNA1-203ENST00000463511 ROBO3Q96MS0 1386 aa27.77■■■□□ 2.04
SSNA1-203ENST00000463511 TAL1P17542 331 aaPredicted RBP27.77■■■□□ 2.04
SSNA1-203ENST00000463511 ZNF792Q3KQV3 632 aa27.77■■■□□ 2.04
SSNA1-203ENST00000463511 PHF24Q9UPV7 400 aa27.77■■■□□ 2.04
SSNA1-203ENST00000463511 CDH23Q9H251 3354 aa27.77■■■□□ 2.04
SSNA1-203ENST00000463511 TRIM43BA6NCK2 446 aa27.76■■■□□ 2.03
SSNA1-203ENST00000463511 PGK1P00558 417 aa27.76■■■□□ 2.03
SSNA1-203ENST00000463511 ZNF697Q5TEC3 545 aa27.76■■■□□ 2.03
SSNA1-203ENST00000463511 C1orf53Q5VUE5 145 aa27.76■■■□□ 2.03
SSNA1-203ENST00000463511 TRIM43Q96BQ3 446 aaPredicted RBP27.76■■■□□ 2.03
SSNA1-203ENST00000463511 LENG1Q96BZ8 264 aaPredicted RBP27.76■■■□□ 2.03
SSNA1-203ENST00000463511 STRBPQ96SI9 672 aaKnown RBP27.76■■■□□ 2.03
SSNA1-203ENST00000463511 DIS3Q9Y2L1 958 aaKnown RBP27.76■■■□□ 2.03
SSNA1-203ENST00000463511 RASA1P20936 1047 aa27.75■■■□□ 2.03
SSNA1-203ENST00000463511 COPB2P35606 906 aa27.75■■■□□ 2.03
SSNA1-203ENST00000463511 SLF1Q9BQI6 1058 aa27.75■■■□□ 2.03
SSNA1-203ENST00000463511 ECHDC1Q9NTX5 307 aa27.75■■■□□ 2.03
SSNA1-203ENST00000463511 ZNF865P0CJ78 1059 aaPredicted RBP27.74■■■□□ 2.03
SSNA1-203ENST00000463511 TLE2Q04725 743 aa27.74■■■□□ 2.03
SSNA1-203ENST00000463511 SBK1Q52WX2 424 aa27.74■■■□□ 2.03
SSNA1-203ENST00000463511 RNF180Q86T96 592 aa27.74■■■□□ 2.03
SSNA1-203ENST00000463511 GSG1L2A8MUP6 293 aa27.73■■■□□ 2.03
SSNA1-203ENST00000463511 MINDY4BA8MYZ0 360 aa27.73■■■□□ 2.03
SSNA1-203ENST00000463511 SNRNP48Q6IEG0 339 aaKnown RBP27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms