RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 PLIN4Q96Q06 1357 aa10.23□□□□□ -0.77
TMEM254-208ENST00000463209 TNRC18O15417 2968 aaPredicted RBP10.23□□□□□ -0.77
TMEM254-208ENST00000463209 F5H6K3 240 aa10.22□□□□□ -0.77
TMEM254-208ENST00000463209 WDR46O15213 610 aaKnown RBP10.22□□□□□ -0.77
TMEM254-208ENST00000463209 TAL1P17542 331 aaPredicted RBP10.22□□□□□ -0.77
TMEM254-208ENST00000463209 SLC4A3P48751 1232 aa10.22□□□□□ -0.77
TMEM254-208ENST00000463209 RGS19P49795 217 aa10.22□□□□□ -0.77
TMEM254-208ENST00000463209 KLRC3Q07444 240 aa10.22□□□□□ -0.77
TMEM254-208ENST00000463209 ALX1Q15699 326 aa10.22□□□□□ -0.77
TMEM254-208ENST00000463209 PLEKHH3Q7Z736 793 aa10.22□□□□□ -0.77
TMEM254-208ENST00000463209 NBPF11Q86T75 865 aa10.22□□□□□ -0.77
TMEM254-208ENST00000463209 SHISA4Q96DD7 197 aa10.22□□□□□ -0.77
TMEM254-208ENST00000463209 ZKSCAN3Q9BRR0 538 aa10.22□□□□□ -0.77
TMEM254-208ENST00000463209 MOV10L1Q9BXT6 1211 aaKnown RBP10.22□□□□□ -0.77
TMEM254-208ENST00000463209 ZNF287Q9HBT7 754 aa10.22□□□□□ -0.77
TMEM254-208ENST00000463209 NYAP2Q9P242 653 aa10.22□□□□□ -0.77
TMEM254-208ENST00000463209 ANAPC4Q9UJX5 808 aa10.22□□□□□ -0.77
TMEM254-208ENST00000463209 STX8Q9UNK0 236 aa10.22□□□□□ -0.77
TMEM254-208ENST00000463209 BRCA2P51587 3418 aa10.22□□□□□ -0.77
TMEM254-208ENST00000463209 TTLL1O95922 423 aa10.21□□□□□ -0.77
TMEM254-208ENST00000463209 CHMLP26374 656 aa10.21□□□□□ -0.77
TMEM254-208ENST00000463209 MAPK4P31152 587 aa10.21□□□□□ -0.77
TMEM254-208ENST00000463209 SNAP25P60880 206 aa10.21□□□□□ -0.77
TMEM254-208ENST00000463209 PTH1RQ03431 593 aa10.21□□□□□ -0.77
TMEM254-208ENST00000463209 TMEM132BQ14DG7 1078 aa10.21□□□□□ -0.77
TMEM254-208ENST00000463209 LBX2Q6XYB7 198 aa10.21□□□□□ -0.77
TMEM254-208ENST00000463209 SLAIN1Q8ND83 568 aa10.21□□□□□ -0.77
TMEM254-208ENST00000463209 GTF3C2Q8WUA4 911 aaPredicted RBP10.21□□□□□ -0.77
TMEM254-208ENST00000463209 KIFC2Q96AC6 838 aa10.21□□□□□ -0.77
TMEM254-208ENST00000463209 TMEM106CQ9BVX2 250 aa10.21□□□□□ -0.77
TMEM254-208ENST00000463209 SPATC1LQ9H0A9 340 aa10.21□□□□□ -0.77
TMEM254-208ENST00000463209 RNF208Q9H0X6 261 aa10.21□□□□□ -0.77
TMEM254-208ENST00000463209 FLRT1Q9NZU1 646 aa10.21□□□□□ -0.77
TMEM254-208ENST00000463209 TAF6LQ9Y6J9 622 aa10.21□□□□□ -0.77
TMEM254-208ENST00000463209 ZMYM6O95789 1325 aa10.21□□□□□ -0.78
TMEM254-208ENST00000463209 HIP1O00291 1037 aa10.2□□□□□ -0.78
TMEM254-208ENST00000463209 VWA5AO00534 786 aa10.2□□□□□ -0.78
TMEM254-208ENST00000463209 ORC4O43929 436 aa10.2□□□□□ -0.78
TMEM254-208ENST00000463209 ERCC3P19447 782 aa10.2□□□□□ -0.78
TMEM254-208ENST00000463209 MCCP23508 829 aa10.2□□□□□ -0.78
TMEM254-208ENST00000463209 IRF5Q13568 498 aa10.2□□□□□ -0.78
TMEM254-208ENST00000463209 MORN1Q5T089 497 aa10.2□□□□□ -0.78
TMEM254-208ENST00000463209 AKNAD1Q5T1N1 836 aa10.2□□□□□ -0.78
TMEM254-208ENST00000463209 SLFN13Q68D06 897 aa10.2□□□□□ -0.78
TMEM254-208ENST00000463209 FRMPD2Q68DX3 1309 aaPredicted RBP10.2□□□□□ -0.78
TMEM254-208ENST00000463209 KCTD1Q719H9 257 aa10.2□□□□□ -0.78
TMEM254-208ENST00000463209 CENPQQ7L2Z9 268 aaPredicted RBP10.2□□□□□ -0.78
TMEM254-208ENST00000463209 NCAPG2Q86XI2 1143 aa10.2□□□□□ -0.78
TMEM254-208ENST00000463209 NUDT12Q9BQG2 462 aa10.2□□□□□ -0.78
TMEM254-208ENST00000463209 SLF1Q9BQI6 1058 aa10.2□□□□□ -0.78
TMEM254-208ENST00000463209 HOXC10Q9NYD6 342 aa10.2□□□□□ -0.78
TMEM254-208ENST00000463209 PPP1R9AQ9ULJ8 1098 aa10.2□□□□□ -0.78
TMEM254-208ENST00000463209 ZNF236Q9UL36 1845 aa10.19□□□□□ -0.78
TMEM254-208ENST00000463209 ZNF213O14771 459 aa10.19□□□□□ -0.78
TMEM254-208ENST00000463209 KDM4AO75164 1064 aa10.19□□□□□ -0.78
TMEM254-208ENST00000463209 ZKSCAN1P17029 563 aaPredicted RBP10.19□□□□□ -0.78
TMEM254-208ENST00000463209 PTPREP23469 700 aa10.19□□□□□ -0.78
TMEM254-208ENST00000463209 RGS2P41220 211 aa10.19□□□□□ -0.78
TMEM254-208ENST00000463209 MFAP1P55081 439 aaKnown RBP10.19□□□□□ -0.78
TMEM254-208ENST00000463209 UBXN2AP68543 259 aa10.19□□□□□ -0.78
TMEM254-208ENST00000463209 CCNA1P78396 465 aa10.19□□□□□ -0.78
TMEM254-208ENST00000463209 MFSD6Q6ZSS7 791 aa10.19□□□□□ -0.78
TMEM254-208ENST00000463209 CPXCR1Q8N123 301 aa10.19□□□□□ -0.78
TMEM254-208ENST00000463209 GMCL1P1Q8NEA9 526 aa10.19□□□□□ -0.78
TMEM254-208ENST00000463209 REPS2Q8NFH8 660 aa10.19□□□□□ -0.78
TMEM254-208ENST00000463209 NPLOC4Q8TAT6 608 aa10.19□□□□□ -0.78
TMEM254-208ENST00000463209 PXYLP1Q8TE99 480 aa10.19□□□□□ -0.78
TMEM254-208ENST00000463209 STAG1Q8WVM7 1258 aa10.19□□□□□ -0.78
TMEM254-208ENST00000463209 USP6NLQ92738 828 aa10.19□□□□□ -0.78
TMEM254-208ENST00000463209 CCDC136Q96JN2 1154 aa10.19□□□□□ -0.78
TMEM254-208ENST00000463209 DEFB118Q96PH6 123 aa10.19□□□□□ -0.78
TMEM254-208ENST00000463209 APBA2Q99767 749 aa10.19□□□□□ -0.78
TMEM254-208ENST00000463209 RAVER2Q9HCJ3 691 aaKnown RBP10.19□□□□□ -0.78
TMEM254-208ENST00000463209 FRMPD3Q5JV73 1810 aa10.19□□□□□ -0.78
TMEM254-208ENST00000463209 B4E1Z4 1266 aa10.18□□□□□ -0.78
TMEM254-208ENST00000463209 TMEM232C9JQI7 657 aa10.18□□□□□ -0.78
TMEM254-208ENST00000463209 HMGCRP04035 888 aa10.18□□□□□ -0.78
TMEM254-208ENST00000463209 PGK2P07205 417 aa10.18□□□□□ -0.78
TMEM254-208ENST00000463209 FGRP09769 529 aa10.18□□□□□ -0.78
TMEM254-208ENST00000463209 BMP3P12645 472 aa10.18□□□□□ -0.78
TMEM254-208ENST00000463209 PRKAR2AP13861 404 aaKnown RBP10.18□□□□□ -0.78
TMEM254-208ENST00000463209 ADORA2AP29274 412 aa10.18□□□□□ -0.78
TMEM254-208ENST00000463209 CCND3P30281 292 aaPredicted RBP10.18□□□□□ -0.78
TMEM254-208ENST00000463209 SLC16A2P36021 539 aa10.18□□□□□ -0.78
TMEM254-208ENST00000463209 SLC1A4P43007 532 aa10.18□□□□□ -0.78
TMEM254-208ENST00000463209 IKQ13123 557 aaPredicted RBP10.18□□□□□ -0.78
TMEM254-208ENST00000463209 MAP2K5Q13163 448 aa10.18□□□□□ -0.78
TMEM254-208ENST00000463209 GRB14Q14449 540 aa10.18□□□□□ -0.78
TMEM254-208ENST00000463209 CCDC96Q2M329 555 aa10.18□□□□□ -0.78
TMEM254-208ENST00000463209 SNRNP48Q6IEG0 339 aaKnown RBP10.18□□□□□ -0.78
TMEM254-208ENST00000463209 TTBK2Q6IQ55 1244 aa10.18□□□□□ -0.78
TMEM254-208ENST00000463209 TICAM2Q86XR7 235 aa10.18□□□□□ -0.78
TMEM254-208ENST00000463209 U2AF1L4Q8WU68 220 aaKnown RBP10.18□□□□□ -0.78
TMEM254-208ENST00000463209 SOCS4Q8WXH5 440 aa10.18□□□□□ -0.78
TMEM254-208ENST00000463209 MKL1Q969V6 931 aa10.18□□□□□ -0.78
TMEM254-208ENST00000463209 TMEM47Q9BQJ4 181 aa10.18□□□□□ -0.78
TMEM254-208ENST00000463209 DSCC1Q9BVC3 393 aa10.18□□□□□ -0.78
TMEM254-208ENST00000463209 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.18□□□□□ -0.78
TMEM254-208ENST00000463209 HOMER2Q9NSB8 354 aa10.18□□□□□ -0.78
TMEM254-208ENST00000463209 ZNF214Q9UL59 606 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms