RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 GMLQ99445 158 aa7.09□□□□□ -1.27
COPS3-204ENST00000462236 ZC3H12CQ9C0D7 883 aaKnown RBP7.09□□□□□ -1.27
COPS3-204ENST00000462236 BTG4Q9NY30 223 aa7.09□□□□□ -1.27
COPS3-204ENST00000462236 PCDHA4Q9UN74 947 aa7.09□□□□□ -1.27
COPS3-204ENST00000462236 PCDHGC5Q9Y5F6 944 aa7.09□□□□□ -1.27
COPS3-204ENST00000462236 AKAP12Q02952 1782 aa7.09□□□□□ -1.27
COPS3-204ENST00000462236 SPATA31A1Q5TZJ5 1347 aa7.08□□□□□ -1.28
COPS3-204ENST00000462236 F6X3S4 739 aa7.08□□□□□ -1.28
COPS3-204ENST00000462236 TIAF1O95411 115 aa7.08□□□□□ -1.28
COPS3-204ENST00000462236 LIG1P18858 919 aa7.08□□□□□ -1.28
COPS3-204ENST00000462236 ID3Q02535 119 aa7.08□□□□□ -1.28
COPS3-204ENST00000462236 SOX4Q06945 474 aaPredicted RBP7.08□□□□□ -1.28
COPS3-204ENST00000462236 APOBRQ0VD83 1088 aa7.08□□□□□ -1.28
COPS3-204ENST00000462236 KCNMA1Q12791 1236 aa7.08□□□□□ -1.28
COPS3-204ENST00000462236 UVSSAQ2YD98 709 aa7.08□□□□□ -1.28
COPS3-204ENST00000462236 FDX2Q6P4F2 183 aa7.08□□□□□ -1.28
COPS3-204ENST00000462236 SHISA2Q6UWI4 295 aa7.08□□□□□ -1.28
COPS3-204ENST00000462236 REXO1Q8N1G1 1221 aaKnown RBP7.08□□□□□ -1.28
COPS3-204ENST00000462236 JARID2Q92833 1246 aaPredicted RBP7.08□□□□□ -1.28
COPS3-204ENST00000462236 ATXN3LQ9H3M9 355 aa7.08□□□□□ -1.28
COPS3-204ENST00000462236 GSX1Q9H4S2 264 aaPredicted RBP7.08□□□□□ -1.28
COPS3-204ENST00000462236 CAPN10Q9HC96 672 aa7.08□□□□□ -1.28
COPS3-204ENST00000462236 ANKRD30BQ9BXX2 1392 aa7.08□□□□□ -1.28
COPS3-204ENST00000462236 TOPAZ1Q8N9V7 1692 aa7.07□□□□□ -1.28
COPS3-204ENST00000462236 GFRA2O00451 464 aa7.07□□□□□ -1.28
COPS3-204ENST00000462236 KCNQ2O43526 872 aa7.07□□□□□ -1.28
COPS3-204ENST00000462236 PTPN11Q06124 597 aaPredicted RBP7.07□□□□□ -1.28
COPS3-204ENST00000462236 RING1Q06587 406 aa7.07□□□□□ -1.28
COPS3-204ENST00000462236 MBTPS1Q14703 1052 aa7.07□□□□□ -1.28
COPS3-204ENST00000462236 CYFIP1Q7L576 1253 aa7.07□□□□□ -1.28
COPS3-204ENST00000462236 REC114Q7Z4M0 266 aa7.07□□□□□ -1.28
COPS3-204ENST00000462236 WFDC12Q8WWY7 111 aa7.07□□□□□ -1.28
COPS3-204ENST00000462236 NKD1Q969G9 470 aa7.07□□□□□ -1.28
COPS3-204ENST00000462236 WDR89Q96FK6 387 aaPredicted RBP7.07□□□□□ -1.28
COPS3-204ENST00000462236 SPON1Q9HCB6 807 aa7.07□□□□□ -1.28
COPS3-204ENST00000462236 CRIM1Q9NZV1 1036 aa7.07□□□□□ -1.28
COPS3-204ENST00000462236 RGPD5Q99666 1765 aa7.07□□□□□ -1.28
COPS3-204ENST00000462236 QSER1Q2KHR3 1735 aa7.07□□□□□ -1.28
COPS3-204ENST00000462236 PRR36Q9H6K5 1346 aa7.06□□□□□ -1.28
COPS3-204ENST00000462236 COL18A1P39060 1754 aa7.06□□□□□ -1.28
COPS3-204ENST00000462236 FANCGO15287 622 aa7.06□□□□□ -1.28
COPS3-204ENST00000462236 ADH5P11766 374 aa7.06□□□□□ -1.28
COPS3-204ENST00000462236 ZNF165P49910 485 aa7.06□□□□□ -1.28
COPS3-204ENST00000462236 SF3A1Q15459 793 aaKnown RBP7.06□□□□□ -1.28
COPS3-204ENST00000462236 TMEM132EQ6IEE7 984 aa7.06□□□□□ -1.28
COPS3-204ENST00000462236 MPRIPQ6WCQ1 1025 aa7.06□□□□□ -1.28
COPS3-204ENST00000462236 TXNRD3Q86VQ6 643 aa7.06□□□□□ -1.28
COPS3-204ENST00000462236 ELMO3Q96BJ8 720 aa7.06□□□□□ -1.28
COPS3-204ENST00000462236 DCAF5Q96JK2 942 aa7.06□□□□□ -1.28
COPS3-204ENST00000462236 STRIP2Q9ULQ0 834 aa7.06□□□□□ -1.28
COPS3-204ENST00000462236 HIF3AQ9Y2N7 669 aa7.06□□□□□ -1.28
COPS3-204ENST00000462236 ADGRB1O14514 1584 aa7.06□□□□□ -1.28
COPS3-204ENST00000462236 TULP4Q9NRJ4 1543 aa7.06□□□□□ -1.28
COPS3-204ENST00000462236 LRRC37A3O60309 1634 aa7.05□□□□□ -1.28
COPS3-204ENST00000462236 ARHGEF28Q8N1W1 1705 aaKnown RBP7.05□□□□□ -1.28
COPS3-204ENST00000462236 TMPRSS2O15393 492 aa7.05□□□□□ -1.28
COPS3-204ENST00000462236 ATE1O95260 518 aa7.05□□□□□ -1.28
COPS3-204ENST00000462236 IMPDH2P12268 514 aa7.05□□□□□ -1.28
COPS3-204ENST00000462236 NOS3P29474 1203 aa7.05□□□□□ -1.28
COPS3-204ENST00000462236 SOX9P48436 509 aa7.05□□□□□ -1.28
COPS3-204ENST00000462236 ARID5AQ03989 594 aa7.05□□□□□ -1.28
COPS3-204ENST00000462236 PDE4BQ07343 736 aa7.05□□□□□ -1.28
COPS3-204ENST00000462236 AKAP4Q5JQC9 854 aa7.05□□□□□ -1.28
COPS3-204ENST00000462236 WIPI1Q5MNZ9 446 aaPredicted RBP7.05□□□□□ -1.28
COPS3-204ENST00000462236 DZIP1LQ8IYY4 767 aaKnown RBP7.05□□□□□ -1.28
COPS3-204ENST00000462236 C12orf50Q8NA57 414 aaPredicted RBP7.05□□□□□ -1.28
COPS3-204ENST00000462236 PLPPR2Q96GM1 343 aa7.05□□□□□ -1.28
COPS3-204ENST00000462236 UBP1Q9NZI7 540 aa7.05□□□□□ -1.28
COPS3-204ENST00000462236 STK26Q9P289 416 aa7.05□□□□□ -1.28
COPS3-204ENST00000462236 SHANK3Q9BYB0 1731 aa7.04□□□□□ -1.28
COPS3-204ENST00000462236 TUBGCP6Q96RT7 1819 aa7.04□□□□□ -1.28
COPS3-204ENST00000462236 SSH2Q76I76 1423 aa7.04□□□□□ -1.28
COPS3-204ENST00000462236 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.04□□□□□ -1.28
COPS3-204ENST00000462236 KRBA1A5PL33 1030 aa7.04□□□□□ -1.28
COPS3-204ENST00000462236 ATF4P18848 351 aaPredicted RBP7.04□□□□□ -1.28
COPS3-204ENST00000462236 CRKP46108 304 aa7.04□□□□□ -1.28
COPS3-204ENST00000462236 TNNI2P48788 182 aa7.04□□□□□ -1.28
COPS3-204ENST00000462236 LRFN4Q6PJG9 635 aa7.04□□□□□ -1.28
COPS3-204ENST00000462236 KCT2Q8NC54 265 aa7.04□□□□□ -1.28
COPS3-204ENST00000462236 RNF214Q8ND24 703 aa7.04□□□□□ -1.28
COPS3-204ENST00000462236 ARMC5Q96C12 935 aa7.04□□□□□ -1.28
COPS3-204ENST00000462236 FAM46AQ96IP4 442 aaKnown RBP7.04□□□□□ -1.28
COPS3-204ENST00000462236 C14orf93Q9H972 538 aaKnown RBP7.04□□□□□ -1.28
COPS3-204ENST00000462236 EHMT1Q9H9B1 1298 aa7.04□□□□□ -1.28
COPS3-204ENST00000462236 ADAM30Q9UKF2 790 aa7.04□□□□□ -1.28
COPS3-204ENST00000462236 PPP1R9AQ9ULJ8 1098 aa7.04□□□□□ -1.28
COPS3-204ENST00000462236 DHX57Q6P158 1386 aaKnown RBP7.04□□□□□ -1.28
COPS3-204ENST00000462236 PAPPAQ13219 1627 aa7.03□□□□□ -1.28
COPS3-204ENST00000462236 SART1O43290 800 aaKnown RBP7.03□□□□□ -1.28
COPS3-204ENST00000462236 GLB1P16278 677 aa7.03□□□□□ -1.28
COPS3-204ENST00000462236 IREB2P48200 963 aaKnown RBP7.03□□□□□ -1.28
COPS3-204ENST00000462236 C1QTNF8P60827 252 aa7.03□□□□□ -1.28
COPS3-204ENST00000462236 INPP5AQ14642 412 aa7.03□□□□□ -1.28
COPS3-204ENST00000462236 NBPF8Q3BBV2 869 aa7.03□□□□□ -1.28
COPS3-204ENST00000462236 SEZ6Q53EL9 994 aa7.03□□□□□ -1.28
COPS3-204ENST00000462236 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.03□□□□□ -1.28
COPS3-204ENST00000462236 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.03□□□□□ -1.28
COPS3-204ENST00000462236 C2CD4AQ8NCU7 369 aaPredicted RBP7.03□□□□□ -1.28
COPS3-204ENST00000462236 PMFBP1Q8TBY8 1022 aa7.03□□□□□ -1.28
COPS3-204ENST00000462236 SREK1Q8WXA9 508 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms