RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 COLQQ9Y215 455 aaPredicted RBP22.59■■□□□ 1.21
VARS-220ENST00000461874 NR2E3Q9Y5X4 410 aa22.59■■□□□ 1.21
VARS-220ENST00000461874 IGHA2P01877 340 aa22.58■■□□□ 1.21
VARS-220ENST00000461874 ADORA2AP29274 412 aa22.58■■□□□ 1.21
VARS-220ENST00000461874 LHX8Q68G74 356 aa22.58■■□□□ 1.21
VARS-220ENST00000461874 CCDC129Q6ZRS4 1044 aa22.58■■□□□ 1.21
VARS-220ENST00000461874 DPP9Q86TI2 863 aa22.58■■□□□ 1.21
VARS-220ENST00000461874 NCAPG2Q86XI2 1143 aa22.58■■□□□ 1.21
VARS-220ENST00000461874 SMC5Q8IY18 1101 aa22.58■■□□□ 1.21
VARS-220ENST00000461874 NBPF3Q9H094 633 aa22.58■■□□□ 1.21
VARS-220ENST00000461874 CLIP2Q9UDT6 1046 aa22.58■■□□□ 1.21
VARS-220ENST00000461874 PPP1R9AQ9ULJ8 1098 aa22.58■■□□□ 1.21
VARS-220ENST00000461874 A0A0G2JMZ2 1700 aa22.57■■□□□ 1.2
VARS-220ENST00000461874 GREB1LQ9C091 1923 aaPredicted RBP22.57■■□□□ 1.2
VARS-220ENST00000461874 F5H6K3 240 aa22.57■■□□□ 1.2
VARS-220ENST00000461874 VWA5AO00534 786 aa22.57■■□□□ 1.2
VARS-220ENST00000461874 FOXP2O15409 715 aa22.57■■□□□ 1.2
VARS-220ENST00000461874 SLC3A2P08195 630 aaKnown RBP22.57■■□□□ 1.2
VARS-220ENST00000461874 PDE4BQ07343 736 aa22.57■■□□□ 1.2
VARS-220ENST00000461874 KLRC3Q07444 240 aa22.57■■□□□ 1.2
VARS-220ENST00000461874 PPARAQ07869 468 aa22.57■■□□□ 1.2
VARS-220ENST00000461874 ABRAQ8N0Z2 381 aa22.57■■□□□ 1.2
VARS-220ENST00000461874 MKL1Q969V6 931 aa22.57■■□□□ 1.2
VARS-220ENST00000461874 LNPKQ9C0E8 428 aa22.57■■□□□ 1.2
VARS-220ENST00000461874 MTMR4Q9NYA4 1195 aa22.57■■□□□ 1.2
VARS-220ENST00000461874 EVI5O60447 810 aa22.56■■□□□ 1.2
VARS-220ENST00000461874 SLC25A27O95847 323 aa22.56■■□□□ 1.2
VARS-220ENST00000461874 NDUFB10O96000 172 aa22.56■■□□□ 1.2
VARS-220ENST00000461874 NEDD1Q8NHV4 660 aa22.56■■□□□ 1.2
VARS-220ENST00000461874 CEP95Q96GE4 821 aa22.56■■□□□ 1.2
VARS-220ENST00000461874 NUP88Q99567 741 aaPredicted RBP22.56■■□□□ 1.2
VARS-220ENST00000461874 COBLO75128 1261 aa22.55■■□□□ 1.2
VARS-220ENST00000461874 CYP2C19P33261 490 aa22.55■■□□□ 1.2
VARS-220ENST00000461874 OLFML2BQ68BL8 750 aa22.55■■□□□ 1.2
VARS-220ENST00000461874 TICAM2Q86XR7 235 aa22.55■■□□□ 1.2
VARS-220ENST00000461874 RIOX2Q8IUF8 465 aa22.55■■□□□ 1.2
VARS-220ENST00000461874 EXOC6Q8TAG9 804 aa22.55■■□□□ 1.2
VARS-220ENST00000461874 HELLSQ9NRZ9 838 aa22.55■■□□□ 1.2
VARS-220ENST00000461874 PLIN4Q96Q06 1357 aa22.54■■□□□ 1.2
VARS-220ENST00000461874 TTLL1O95922 423 aa22.54■■□□□ 1.2
VARS-220ENST00000461874 IGHDP01880 384 aa22.54■■□□□ 1.2
VARS-220ENST00000461874 STAT3P40763 770 aa22.54■■□□□ 1.2
VARS-220ENST00000461874 B4GALNT3Q6L9W6 998 aa22.54■■□□□ 1.2
VARS-220ENST00000461874 REPS2Q8NFH8 660 aa22.54■■□□□ 1.2
VARS-220ENST00000461874 SLF1Q9BQI6 1058 aa22.54■■□□□ 1.2
VARS-220ENST00000461874 C11orf49Q9H6J7 331 aa22.54■■□□□ 1.2
VARS-220ENST00000461874 SLC5A4Q9NY91 659 aa22.54■■□□□ 1.2
VARS-220ENST00000461874 SYNPO2Q9UMS6 1093 aa22.54■■□□□ 1.2
VARS-220ENST00000461874 TRIOBPQ9H2D6 2365 aa22.54■■□□□ 1.2
VARS-220ENST00000461874 TSPY3P0CV98 308 aa22.53■■□□□ 1.2
VARS-220ENST00000461874 TSPY8P0CW00 308 aa22.53■■□□□ 1.2
VARS-220ENST00000461874 FCER1AP12319 257 aa22.53■■□□□ 1.2
VARS-220ENST00000461874 TFAP4Q01664 338 aa22.53■■□□□ 1.2
VARS-220ENST00000461874 FAM47AQ5JRC9 791 aa22.53■■□□□ 1.2
VARS-220ENST00000461874 VPS53Q5VIR6 699 aa22.53■■□□□ 1.2
VARS-220ENST00000461874 CHRDL2Q6WN34 429 aa22.53■■□□□ 1.2
VARS-220ENST00000461874 TRPV1Q8NER1 839 aa22.53■■□□□ 1.2
VARS-220ENST00000461874 ZNF214Q9UL59 606 aaPredicted RBP22.53■■□□□ 1.2
VARS-220ENST00000461874 CHD1LQ86WJ1 897 aa22.52■■□□□ 1.2
VARS-220ENST00000461874 PRPF38AQ8NAV1 312 aaKnown RBP22.52■■□□□ 1.2
VARS-220ENST00000461874 GMCL1P1Q8NEA9 526 aa22.52■■□□□ 1.2
VARS-220ENST00000461874 FAM227BQ96M60 508 aa22.52■■□□□ 1.2
VARS-220ENST00000461874 DDX20Q9UHI6 824 aaKnown RBP22.52■■□□□ 1.2
VARS-220ENST00000461874 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.52■■□□□ 1.2
VARS-220ENST00000461874 ZNF236Q9UL36 1845 aa22.52■■□□□ 1.2
VARS-220ENST00000461874 RANBP2P49792 3224 aaKnown RBP22.51■■□□□ 1.19
VARS-220ENST00000461874 MSCO60682 206 aa22.51■■□□□ 1.19
VARS-220ENST00000461874 COL6A1P12109 1028 aa22.51■■□□□ 1.19
VARS-220ENST00000461874 CYBAP13498 195 aa22.51■■□□□ 1.19
VARS-220ENST00000461874 CNGA1P29973 690 aa22.51■■□□□ 1.19
VARS-220ENST00000461874 COPB2P35606 906 aa22.51■■□□□ 1.19
VARS-220ENST00000461874 NUCB1Q02818 461 aa22.51■■□□□ 1.19
VARS-220ENST00000461874 CTDSPL2Q05D32 466 aa22.51■■□□□ 1.19
VARS-220ENST00000461874 ALX1Q15699 326 aa22.51■■□□□ 1.19
VARS-220ENST00000461874 MCMDC2Q4G0Z9 681 aa22.51■■□□□ 1.19
VARS-220ENST00000461874 MMP19Q99542 508 aa22.51■■□□□ 1.19
VARS-220ENST00000461874 ANAPC4Q9UJX5 808 aa22.51■■□□□ 1.19
VARS-220ENST00000461874 PARP14Q460N5 1801 aa22.51■■□□□ 1.19
VARS-220ENST00000461874 PFASO15067 1338 aa22.51■■□□□ 1.19
VARS-220ENST00000461874 A0A0D9SFI3 127 aa22.5■■□□□ 1.19
VARS-220ENST00000461874 LRRC47Q8N1G4 583 aaKnown RBP22.5■■□□□ 1.19
VARS-220ENST00000461874 MAML3Q96JK9 1138 aa22.5■■□□□ 1.19
VARS-220ENST00000461874 INCENPQ9NQS7 918 aa22.5■■□□□ 1.19
VARS-220ENST00000461874 TRIM6-TRIM34B2RNG4 842 aa22.49■■□□□ 1.19
VARS-220ENST00000461874 KCTD2Q14681 263 aa22.49■■□□□ 1.19
VARS-220ENST00000461874 SLFN13Q68D06 897 aa22.49■■□□□ 1.19
VARS-220ENST00000461874 PLEKHM2Q8IWE5 1019 aa22.49■■□□□ 1.19
VARS-220ENST00000461874 TEX13BQ9BXU2 312 aa22.49■■□□□ 1.19
VARS-220ENST00000461874 PRO3102Q9H379 93 aa22.49■■□□□ 1.19
VARS-220ENST00000461874 OSBPL3Q9H4L5 887 aa22.49■■□□□ 1.19
VARS-220ENST00000461874 RBM27Q9P2N5 1060 aaKnown RBP22.49■■□□□ 1.19
VARS-220ENST00000461874 FEM1BQ9UK73 627 aa22.49■■□□□ 1.19
VARS-220ENST00000461874 TACC3Q9Y6A5 838 aa22.49■■□□□ 1.19
VARS-220ENST00000461874 PGK2P07205 417 aa22.48■■□□□ 1.19
VARS-220ENST00000461874 FXR1P51114 621 aaKnown RBP eCLIP22.48■■□□□ 1.191e-6■■■□□ 18.6
VARS-220ENST00000461874 NMIQ13287 307 aaPredicted RBP22.48■■□□□ 1.19
VARS-220ENST00000461874 PPP4R3BQ5MIZ7 849 aa22.48■■□□□ 1.19
VARS-220ENST00000461874 C7orf61Q8IZ16 206 aa22.48■■□□□ 1.19
VARS-220ENST00000461874 RILPL2Q969X0 211 aa22.48■■□□□ 1.19
VARS-220ENST00000461874 TSPY2A6NKD2 308 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms