RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 FAM227BQ96M60 508 aa18.51■□□□□ 0.55
NUP50-213ENST00000461437 NAPBQ9H115 298 aa18.51■□□□□ 0.55
NUP50-213ENST00000461437 STAP2Q9UGK3 403 aa18.51■□□□□ 0.55
NUP50-213ENST00000461437 TACC3Q9Y6A5 838 aa18.51■□□□□ 0.55
NUP50-213ENST00000461437 IVNS1ABPQ9Y6Y0 642 aa18.51■□□□□ 0.55
NUP50-213ENST00000461437 SMCHD1A6NHR9 2005 aa18.5■□□□□ 0.55
NUP50-213ENST00000461437 IGKV6D-41A0A0C4DH26 115 aa18.5■□□□□ 0.55
NUP50-213ENST00000461437 ADORA2AP29274 412 aa18.5■□□□□ 0.55
NUP50-213ENST00000461437 CYP2C19P33261 490 aa18.5■□□□□ 0.55
NUP50-213ENST00000461437 IRX6P78412 446 aaPredicted RBP18.5■□□□□ 0.55
NUP50-213ENST00000461437 PPARAQ07869 468 aa18.5■□□□□ 0.55
NUP50-213ENST00000461437 LRRFIP1Q32MZ4 808 aaKnown RBP18.5■□□□□ 0.55
NUP50-213ENST00000461437 CEP95Q96GE4 821 aa18.5■□□□□ 0.55
NUP50-213ENST00000461437 HTATIP2Q9BUP3 242 aa18.5■□□□□ 0.55
NUP50-213ENST00000461437 GOPCQ9HD26 462 aa18.5■□□□□ 0.55
NUP50-213ENST00000461437 CLIP2Q9UDT6 1046 aa18.5■□□□□ 0.55
NUP50-213ENST00000461437 SUPT16HQ9Y5B9 1047 aaKnown RBP18.5■□□□□ 0.55
NUP50-213ENST00000461437 TRIOBPQ9H2D6 2365 aa18.5■□□□□ 0.55
NUP50-213ENST00000461437 A0A0D9SFI3 127 aa18.49■□□□□ 0.55
NUP50-213ENST00000461437 COBLO75128 1261 aa18.49■□□□□ 0.55
NUP50-213ENST00000461437 NDUFB10O96000 172 aa18.49■□□□□ 0.55
NUP50-213ENST00000461437 ZNF444Q8N0Y2 327 aaPredicted RBP18.49■□□□□ 0.55
NUP50-213ENST00000461437 TRPV1Q8NER1 839 aa18.49■□□□□ 0.55
NUP50-213ENST00000461437 EVI5LQ96CN4 794 aa18.49■□□□□ 0.55
NUP50-213ENST00000461437 F5H6K3 240 aa18.48■□□□□ 0.55
NUP50-213ENST00000461437 KLRC3Q07444 240 aa18.48■□□□□ 0.55
NUP50-213ENST00000461437 CHRDL2Q6WN34 429 aa18.48■□□□□ 0.55
NUP50-213ENST00000461437 DPP9Q86TI2 863 aa18.48■□□□□ 0.55
NUP50-213ENST00000461437 SMC5Q8IY18 1101 aa18.48■□□□□ 0.55
NUP50-213ENST00000461437 NACAP1Q9BZK3 213 aa18.48■□□□□ 0.55
NUP50-213ENST00000461437 NYAP2Q9P242 653 aa18.48■□□□□ 0.55
NUP50-213ENST00000461437 OGDHLQ9ULD0 1010 aa18.48■□□□□ 0.55
NUP50-213ENST00000461437 PPP1R9AQ9ULJ8 1098 aa18.48■□□□□ 0.55
NUP50-213ENST00000461437 MCM3APO60318 1980 aa18.48■□□□□ 0.55
NUP50-213ENST00000461437 TRIM6-TRIM34B2RNG4 842 aa18.47■□□□□ 0.55
NUP50-213ENST00000461437 SLC4A3P48751 1232 aa18.47■□□□□ 0.55
NUP50-213ENST00000461437 NMIQ13287 307 aaPredicted RBP18.47■□□□□ 0.55
NUP50-213ENST00000461437 ANO1Q5XXA6 986 aa18.47■□□□□ 0.55
NUP50-213ENST00000461437 LHX8Q68G74 356 aa18.47■□□□□ 0.55
NUP50-213ENST00000461437 RASGRP2Q7LDG7 609 aa18.47■□□□□ 0.55
NUP50-213ENST00000461437 NECAB2Q7Z6G3 386 aa18.47■□□□□ 0.55
NUP50-213ENST00000461437 TRMT44Q8IYL2 757 aaKnown RBP18.47■□□□□ 0.55
NUP50-213ENST00000461437 RILPL2Q969X0 211 aa18.47■□□□□ 0.55
NUP50-213ENST00000461437 RWDD1Q9H446 243 aaPredicted RBP18.47■□□□□ 0.55
NUP50-213ENST00000461437 VWA5AO00534 786 aa18.46■□□□□ 0.55
NUP50-213ENST00000461437 NMT2O60551 498 aa18.46■□□□□ 0.55
NUP50-213ENST00000461437 PGK2P07205 417 aa18.46■□□□□ 0.55
NUP50-213ENST00000461437 TSPY3P0CV98 308 aa18.46■□□□□ 0.55
NUP50-213ENST00000461437 TSPY8P0CW00 308 aa18.46■□□□□ 0.55
NUP50-213ENST00000461437 CNGA1P29973 690 aa18.46■□□□□ 0.55
NUP50-213ENST00000461437 TFAP4Q01664 338 aa18.46■□□□□ 0.55
NUP50-213ENST00000461437 PRAMEF19Q5SWL8 479 aa18.46■□□□□ 0.55
NUP50-213ENST00000461437 MFSD14CQ5VZR4 134 aa18.46■□□□□ 0.55
NUP50-213ENST00000461437 ZNF589Q86UQ0 364 aaPredicted RBP18.46■□□□□ 0.55
NUP50-213ENST00000461437 MB21D1Q8N884 522 aa18.46■□□□□ 0.55
NUP50-213ENST00000461437 SHCBP1Q8NEM2 672 aa18.46■□□□□ 0.55
NUP50-213ENST00000461437 REPS2Q8NFH8 660 aa18.46■□□□□ 0.55
NUP50-213ENST00000461437 MTMR4Q9NYA4 1195 aa18.46■□□□□ 0.55
NUP50-213ENST00000461437 ADAMTS5Q9UNA0 930 aa18.46■□□□□ 0.55
NUP50-213ENST00000461437 EVI5O60447 810 aa18.45■□□□□ 0.54
NUP50-213ENST00000461437 HOXC6P09630 235 aa18.45■□□□□ 0.54
NUP50-213ENST00000461437 CHD1LQ86WJ1 897 aa18.45■□□□□ 0.54
NUP50-213ENST00000461437 PLEKHM2Q8IWE5 1019 aa18.45■□□□□ 0.54
NUP50-213ENST00000461437 C7orf61Q8IZ16 206 aa18.45■□□□□ 0.54
NUP50-213ENST00000461437 NEDD1Q8NHV4 660 aa18.45■□□□□ 0.54
NUP50-213ENST00000461437 SLF1Q9BQI6 1058 aa18.45■□□□□ 0.54
NUP50-213ENST00000461437 C11orf49Q9H6J7 331 aa18.45■□□□□ 0.54
NUP50-213ENST00000461437 ZNF214Q9UL59 606 aaPredicted RBP18.45■□□□□ 0.54
NUP50-213ENST00000461437 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.45■□□□□ 0.54
NUP50-213ENST00000461437 PFASO15067 1338 aa18.45■□□□□ 0.54
NUP50-213ENST00000461437 PLIN4Q96Q06 1357 aa18.44■□□□□ 0.54
NUP50-213ENST00000461437 PDE4BQ07343 736 aa18.44■□□□□ 0.54
NUP50-213ENST00000461437 KIFC2Q96AC6 838 aa18.44■□□□□ 0.54
NUP50-213ENST00000461437 NBPF3Q9H094 633 aa18.44■□□□□ 0.54
NUP50-213ENST00000461437 MROH8Q9H579 483 aa18.44■□□□□ 0.54
NUP50-213ENST00000461437 HELLSQ9NRZ9 838 aa18.44■□□□□ 0.54
NUP50-213ENST00000461437 ISY1Q9ULR0 285 aaKnown RBP18.44■□□□□ 0.54
NUP50-213ENST00000461437 MTMR7Q9Y216 660 aa18.44■□□□□ 0.54
NUP50-213ENST00000461437 RIPK3Q9Y572 518 aa18.44■□□□□ 0.54
NUP50-213ENST00000461437 TTLL1O95922 423 aa18.43■□□□□ 0.54
NUP50-213ENST00000461437 IGHA2P01877 340 aa18.43■□□□□ 0.54
NUP50-213ENST00000461437 CYBAP13498 195 aa18.43■□□□□ 0.54
NUP50-213ENST00000461437 STAT3P40763 770 aa18.43■□□□□ 0.54
NUP50-213ENST00000461437 NUCB1Q02818 461 aa18.43■□□□□ 0.54
NUP50-213ENST00000461437 RIOX2Q8IUF8 465 aa18.43■□□□□ 0.54
NUP50-213ENST00000461437 CPXCR1Q8N123 301 aa18.43■□□□□ 0.54
NUP50-213ENST00000461437 ANKLE1Q8NAG6 615 aa18.43■□□□□ 0.54
NUP50-213ENST00000461437 MMP19Q99542 508 aa18.43■□□□□ 0.54
NUP50-213ENST00000461437 ZNF287Q9HBT7 754 aa18.43■□□□□ 0.54
NUP50-213ENST00000461437 RBM27Q9P2N5 1060 aaKnown RBP18.43■□□□□ 0.54
NUP50-213ENST00000461437 ZMYND8Q9ULU4 1186 aaPredicted RBP18.43■□□□□ 0.54
NUP50-213ENST00000461437 STRNO43815 780 aa18.42■□□□□ 0.54
NUP50-213ENST00000461437 SLC3A2P08195 630 aaKnown RBP18.42■□□□□ 0.54
NUP50-213ENST00000461437 FCER1AP12319 257 aa18.42■□□□□ 0.54
NUP50-213ENST00000461437 SYN1P17600 705 aa18.42■□□□□ 0.54
NUP50-213ENST00000461437 FXR1P51114 621 aaKnown RBP eCLIP18.42■□□□□ 0.54
NUP50-213ENST00000461437 HAND2P61296 217 aa18.42■□□□□ 0.54
NUP50-213ENST00000461437 MCMDC2Q4G0Z9 681 aa18.42■□□□□ 0.54
NUP50-213ENST00000461437 SLFN13Q68D06 897 aa18.42■□□□□ 0.54
NUP50-213ENST00000461437 SNRNP48Q6IEG0 339 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms