RNA–Protein interactions for RNA: ENST00000461370.1

CCT4-202, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2

Gene CCT4, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-202ENST00000461370 KREMEN1Q96MU8 473 aa6.57□□□□□ -1.36
CCT4-202ENST00000461370 TRIT1Q9H3H1 467 aaKnown RBP6.57□□□□□ -1.36
CCT4-202ENST00000461370 CARS2Q9HA77 564 aaKnown RBP6.57□□□□□ -1.36
CCT4-202ENST00000461370 LMCD1Q9NZU5 365 aa6.57□□□□□ -1.36
CCT4-202ENST00000461370 ZSWIM5Q9P217 1185 aa6.57□□□□□ -1.36
CCT4-202ENST00000461370 KIF21BO75037 1637 aa6.57□□□□□ -1.36
CCT4-202ENST00000461370 BIVM-ERCC5R4GMW8 1640 aa6.57□□□□□ -1.36
CCT4-202ENST00000461370 CUL7Q14999 1698 aa6.56□□□□□ -1.36
CCT4-202ENST00000461370 RGS13O14921 159 aa6.56□□□□□ -1.36
CCT4-202ENST00000461370 HSPA1LP34931 641 aa6.56□□□□□ -1.36
CCT4-202ENST00000461370 CLCQ05315 142 aa6.56□□□□□ -1.36
CCT4-202ENST00000461370 TMPRSS7Q7RTY8 843 aa6.56□□□□□ -1.36
CCT4-202ENST00000461370 ATG4DQ86TL0 474 aaPredicted RBP6.56□□□□□ -1.36
CCT4-202ENST00000461370 TMEM40Q8WWA1 233 aa6.56□□□□□ -1.36
CCT4-202ENST00000461370 UBE2FQ969M7 185 aa6.56□□□□□ -1.36
CCT4-202ENST00000461370 KRTAP4-8Q9BYQ9 185 aa6.56□□□□□ -1.36
CCT4-202ENST00000461370 KIAA1522Q9P206 1035 aaPredicted RBP6.56□□□□□ -1.36
CCT4-202ENST00000461370 DDX41Q9UJV9 622 aaKnown RBP6.56□□□□□ -1.36
CCT4-202ENST00000461370 MAP3K4Q9Y6R4 1608 aa6.56□□□□□ -1.36
CCT4-202ENST00000461370 AKNAQ7Z591 1439 aa6.56□□□□□ -1.36
CCT4-202ENST00000461370 PPRC1Q5VV67 1664 aaKnown RBP6.55□□□□□ -1.36
CCT4-202ENST00000461370 MEIS3P2A8K0S8 358 aa6.55□□□□□ -1.36
CCT4-202ENST00000461370 RBAK-RBAKDNI3L0D1 243 aa6.55□□□□□ -1.36
CCT4-202ENST00000461370 PAPLNO95428 1278 aa6.55□□□□□ -1.36
CCT4-202ENST00000461370 RACK1P63244 317 aaKnown RBP6.55□□□□□ -1.36
CCT4-202ENST00000461370 RNF4P78317 190 aa6.55□□□□□ -1.36
CCT4-202ENST00000461370 LRRFIP1Q32MZ4 808 aaKnown RBP6.55□□□□□ -1.36
CCT4-202ENST00000461370 CDCP2Q5VXM1 449 aa6.55□□□□□ -1.36
CCT4-202ENST00000461370 NLRC3Q7RTR2 1065 aa6.55□□□□□ -1.36
CCT4-202ENST00000461370 GPR62Q9BZJ7 368 aa6.55□□□□□ -1.36
CCT4-202ENST00000461370 GPATCH2Q9NW75 528 aa6.55□□□□□ -1.36
CCT4-202ENST00000461370 EEA1Q15075 1411 aa6.55□□□□□ -1.36
CCT4-202ENST00000461370 ARAP3Q8WWN8 1544 aa6.55□□□□□ -1.36
CCT4-202ENST00000461370 UHRF1BP1Q6BDS2 1440 aa6.54□□□□□ -1.36
CCT4-202ENST00000461370 UNCXA6NJT0 531 aa6.54□□□□□ -1.36
CCT4-202ENST00000461370 UBOX5O94941 541 aa6.54□□□□□ -1.36
CCT4-202ENST00000461370 POLR2BP30876 1174 aaKnown RBP6.54□□□□□ -1.36
CCT4-202ENST00000461370 METTL16Q86W50 562 aaKnown RBP6.54□□□□□ -1.36
CCT4-202ENST00000461370 ZNF654Q8IZM8 581 aa6.54□□□□□ -1.36
CCT4-202ENST00000461370 FLAD1Q8NFF5 587 aa6.54□□□□□ -1.36
CCT4-202ENST00000461370 ATG4CQ96DT6 458 aa6.54□□□□□ -1.36
CCT4-202ENST00000461370 ASIC4Q96FT7 647 aa6.54□□□□□ -1.36
CCT4-202ENST00000461370 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.54□□□□□ -1.36
CCT4-202ENST00000461370 CNNM2Q9H8M5 875 aa6.54□□□□□ -1.36
CCT4-202ENST00000461370 ZNRF3Q9ULT6 936 aa6.54□□□□□ -1.36
CCT4-202ENST00000461370 RNF114Q9Y508 228 aa6.54□□□□□ -1.36
CCT4-202ENST00000461370 FANCAO15360 1455 aa6.53□□□□□ -1.36
CCT4-202ENST00000461370 SRFP11831 508 aa6.53□□□□□ -1.36
CCT4-202ENST00000461370 IMPDH2P12268 514 aa6.53□□□□□ -1.36
CCT4-202ENST00000461370 TPP2P29144 1249 aaPredicted RBP6.53□□□□□ -1.36
CCT4-202ENST00000461370 CCNFP41002 786 aa6.53□□□□□ -1.36
CCT4-202ENST00000461370 RAD51AP2Q09MP3 1159 aa6.53□□□□□ -1.36
CCT4-202ENST00000461370 NT5DC4Q86YG4 428 aa6.53□□□□□ -1.36
CCT4-202ENST00000461370 FERD3LQ96RJ6 166 aa6.53□□□□□ -1.36
CCT4-202ENST00000461370 PCGF6Q9BYE7 350 aa6.53□□□□□ -1.36
CCT4-202ENST00000461370 DUSP15Q9H1R2 295 aaPredicted RBP6.53□□□□□ -1.36
CCT4-202ENST00000461370 DUSP13Q9UII6 198 aa6.53□□□□□ -1.36
CCT4-202ENST00000461370 DENND4BO75064 1496 aaPredicted RBP6.53□□□□□ -1.36
CCT4-202ENST00000461370 ZCCHC11Q5TAX3 1644 aaKnown RBP6.52□□□□□ -1.37
CCT4-202ENST00000461370 LRRN2O75325 713 aa6.52□□□□□ -1.37
CCT4-202ENST00000461370 NME1P15531 152 aaKnown RBP6.52□□□□□ -1.37
CCT4-202ENST00000461370 HDLBPQ00341 1268 aaKnown RBP6.52□□□□□ -1.37
CCT4-202ENST00000461370 GAB4Q2WGN9 574 aa6.52□□□□□ -1.37
CCT4-202ENST00000461370 TSPYL5Q86VY4 417 aaPredicted RBP6.52□□□□□ -1.37
CCT4-202ENST00000461370 CREG2Q8IUH2 290 aa6.52□□□□□ -1.37
CCT4-202ENST00000461370 CCDC120Q96HB5 630 aa6.52□□□□□ -1.37
CCT4-202ENST00000461370 FMNL2Q96PY5 1086 aa6.52□□□□□ -1.37
CCT4-202ENST00000461370 ALPK1Q96QP1 1244 aa6.52□□□□□ -1.37
CCT4-202ENST00000461370 ANTXR1Q9H6X2 564 aa6.52□□□□□ -1.37
CCT4-202ENST00000461370 IQGAP2Q13576 1575 aa6.52□□□□□ -1.37
CCT4-202ENST00000461370 WASH4PA8MWX3 477 aa6.51□□□□□ -1.37
CCT4-202ENST00000461370 TNFRSF10CO14798 259 aa6.51□□□□□ -1.37
CCT4-202ENST00000461370 CLEC3AO75596 197 aa6.51□□□□□ -1.37
CCT4-202ENST00000461370 ESR1P03372 595 aa6.51□□□□□ -1.37
CCT4-202ENST00000461370 LTKP29376 864 aa6.51□□□□□ -1.37
CCT4-202ENST00000461370 PAK2Q13177 524 aa6.51□□□□□ -1.37
CCT4-202ENST00000461370 CLEC16AQ2KHT3 1053 aa6.51□□□□□ -1.37
CCT4-202ENST00000461370 VWCEQ96DN2 955 aa6.51□□□□□ -1.37
CCT4-202ENST00000461370 SPATA32Q96LK8 384 aa6.51□□□□□ -1.37
CCT4-202ENST00000461370 ASCC2Q9H1I8 757 aaPredicted RBP6.51□□□□□ -1.37
CCT4-202ENST00000461370 SLAMF8Q9P0V8 285 aa6.51□□□□□ -1.37
CCT4-202ENST00000461370 CTNND2Q9UQB3 1225 aa6.51□□□□□ -1.37
CCT4-202ENST00000461370 GOLGA3Q08378 1498 aa6.51□□□□□ -1.37
CCT4-202ENST00000461370 ZNF335Q9H4Z2 1342 aaPredicted RBP6.5□□□□□ -1.37
CCT4-202ENST00000461370 PTPRTO14522 1441 aa6.5□□□□□ -1.37
CCT4-202ENST00000461370 DISP1Q96F81 1524 aa6.5□□□□□ -1.37
CCT4-202ENST00000461370 MADDQ8WXG6 1647 aa6.5□□□□□ -1.37
CCT4-202ENST00000461370 ADAMTSL3P82987 1691 aa6.5□□□□□ -1.37
CCT4-202ENST00000461370 NEO1Q92859 1461 aa6.5□□□□□ -1.37
CCT4-202ENST00000461370 COL9A2Q14055 689 aaPredicted RBP6.5□□□□□ -1.37
CCT4-202ENST00000461370 NBPF12Q5TAG4 269 aaPredicted RBP6.5□□□□□ -1.37
CCT4-202ENST00000461370 EFCAB2Q5VUJ9 269 aa6.5□□□□□ -1.37
CCT4-202ENST00000461370 FAM168AQ92567 244 aa6.5□□□□□ -1.37
CCT4-202ENST00000461370 SLC6A18Q96N87 628 aa6.5□□□□□ -1.37
CCT4-202ENST00000461370 PPT2Q9UMR5 302 aa6.5□□□□□ -1.37
CCT4-202ENST00000461370 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.5□□□□□ -1.37
CCT4-202ENST00000461370 RIMS1Q86UR5 1692 aaKnown RBP6.49□□□□□ -1.37
CCT4-202ENST00000461370 SHISA3A0PJX4 238 aa6.49□□□□□ -1.37
CCT4-202ENST00000461370 GDNFP39905 211 aa6.49□□□□□ -1.37
CCT4-202ENST00000461370 EGR3Q06889 387 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms