RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 DRAXINQ8NBI3 349 aaPredicted RBP9.63□□□□□ -0.87
HDAC9-219ENST00000461159 ZSCAN16Q9H4T2 348 aaPredicted RBP9.63□□□□□ -0.87
HDAC9-219ENST00000461159 BLOC1S6Q9UL45 172 aa9.63□□□□□ -0.87
HDAC9-219ENST00000461159 LTBP1Q14766 1721 aa9.63□□□□□ -0.87
HDAC9-219ENST00000461159 BECN2A8MW95 431 aa9.63□□□□□ -0.87
HDAC9-219ENST00000461159 H3BQV1 296 aa9.63□□□□□ -0.87
HDAC9-219ENST00000461159 RAD17O75943 681 aa9.63□□□□□ -0.87
HDAC9-219ENST00000461159 PEX19P40855 299 aa9.63□□□□□ -0.87
HDAC9-219ENST00000461159 MCM6Q14566 821 aa9.63□□□□□ -0.87
HDAC9-219ENST00000461159 TBC1D25Q3MII6 688 aa9.63□□□□□ -0.87
HDAC9-219ENST00000461159 CCDC144BQ3MJ40 725 aa9.63□□□□□ -0.87
HDAC9-219ENST00000461159 IFFO2Q5TF58 517 aa9.63□□□□□ -0.87
HDAC9-219ENST00000461159 NCAPG2Q86XI2 1143 aa9.63□□□□□ -0.87
HDAC9-219ENST00000461159 CCDC144CPQ8IYA2 1237 aa9.63□□□□□ -0.87
HDAC9-219ENST00000461159 OGFOD1Q8N543 542 aa9.63□□□□□ -0.87
HDAC9-219ENST00000461159 IQUBQ8NA54 791 aa9.63□□□□□ -0.87
HDAC9-219ENST00000461159 SH3RF3Q8TEJ3 882 aaPredicted RBP9.63□□□□□ -0.87
HDAC9-219ENST00000461159 ERO1AQ96HE7 468 aa9.63□□□□□ -0.87
HDAC9-219ENST00000461159 SGIP1Q9BQI5 828 aa9.63□□□□□ -0.87
HDAC9-219ENST00000461159 PIM2Q9P1W9 311 aa9.63□□□□□ -0.87
HDAC9-219ENST00000461159 LCMT1Q9UIC8 334 aa9.63□□□□□ -0.87
HDAC9-219ENST00000461159 BAZ2AQ9UIF9 1905 aaKnown RBP9.63□□□□□ -0.87
HDAC9-219ENST00000461159 B4E1Z4 1266 aa9.62□□□□□ -0.87
HDAC9-219ENST00000461159 CDKL5O76039 1030 aa9.62□□□□□ -0.87
HDAC9-219ENST00000461159 OATP04181 439 aa9.62□□□□□ -0.87
HDAC9-219ENST00000461159 CYP2D6P10635 497 aa9.62□□□□□ -0.87
HDAC9-219ENST00000461159 RPS6KA3P51812 740 aa9.62□□□□□ -0.87
HDAC9-219ENST00000461159 PSMD2Q13200 908 aa9.62□□□□□ -0.87
HDAC9-219ENST00000461159 BRF1Q92994 677 aa9.62□□□□□ -0.87
HDAC9-219ENST00000461159 PGBD1Q96JS3 809 aa9.62□□□□□ -0.87
HDAC9-219ENST00000461159 ZKSCAN3Q9BRR0 538 aa9.62□□□□□ -0.87
HDAC9-219ENST00000461159 COA1Q9GZY4 146 aa9.62□□□□□ -0.87
HDAC9-219ENST00000461159 TTF2Q9UNY4 1162 aaKnown RBP9.62□□□□□ -0.87
HDAC9-219ENST00000461159 RBM47A0AV96 593 aaKnown RBP9.62□□□□□ -0.87
HDAC9-219ENST00000461159 YDJCA8MPS7 323 aa9.62□□□□□ -0.87
HDAC9-219ENST00000461159 USP17L12C9JPN9 530 aa9.62□□□□□ -0.87
HDAC9-219ENST00000461159 USP17L21D6R901 530 aa9.62□□□□□ -0.87
HDAC9-219ENST00000461159 SLURP2P0DP57 97 aa9.62□□□□□ -0.87
HDAC9-219ENST00000461159 ANTXR2P58335 489 aa9.62□□□□□ -0.87
HDAC9-219ENST00000461159 EXOSC10Q01780 885 aaKnown RBP9.62□□□□□ -0.87
HDAC9-219ENST00000461159 GRIK3Q13003 919 aa9.62□□□□□ -0.87
HDAC9-219ENST00000461159 IQCB1Q15051 598 aa9.62□□□□□ -0.87
HDAC9-219ENST00000461159 C15orf52Q6ZUT6 534 aaKnown RBP9.62□□□□□ -0.87
HDAC9-219ENST00000461159 TGFBRAP1Q8WUH2 860 aa9.62□□□□□ -0.87
HDAC9-219ENST00000461159 SENP2Q9HC62 589 aa9.62□□□□□ -0.87
HDAC9-219ENST00000461159 SAP30BPQ9UHR5 308 aaKnown RBP9.62□□□□□ -0.87
HDAC9-219ENST00000461159 SCN9AQ15858 1988 aa9.62□□□□□ -0.87
HDAC9-219ENST00000461159 TMCO5BA8MYB1 307 aa9.61□□□□□ -0.87
HDAC9-219ENST00000461159 USP17L8P0C7I0 530 aa9.61□□□□□ -0.87
HDAC9-219ENST00000461159 CACNB3P54284 484 aa9.61□□□□□ -0.87
HDAC9-219ENST00000461159 GSDMDP57764 484 aa9.61□□□□□ -0.87
HDAC9-219ENST00000461159 APOBRQ0VD83 1088 aa9.61□□□□□ -0.87
HDAC9-219ENST00000461159 RESTQ13127 1097 aa9.61□□□□□ -0.87
HDAC9-219ENST00000461159 RBBP5Q15291 538 aaKnown RBP9.61□□□□□ -0.87
HDAC9-219ENST00000461159 NYAP1Q6ZVC0 841 aa9.61□□□□□ -0.87
HDAC9-219ENST00000461159 MAPKAPK5Q8IW41 473 aa9.61□□□□□ -0.87
HDAC9-219ENST00000461159 RBM12BQ8IXT5 1001 aaKnown RBP9.61□□□□□ -0.87
HDAC9-219ENST00000461159 LARGE2Q8N3Y3 721 aa9.61□□□□□ -0.87
HDAC9-219ENST00000461159 EYA3Q99504 573 aa9.61□□□□□ -0.87
HDAC9-219ENST00000461159 UBA5Q9GZZ9 404 aa9.61□□□□□ -0.87
HDAC9-219ENST00000461159 IQCGQ9H095 443 aaKnown RBP9.61□□□□□ -0.87
HDAC9-219ENST00000461159 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.61□□□□□ -0.87
HDAC9-219ENST00000461159 LRRC37AA6NMS7 1700 aa9.61□□□□□ -0.87
HDAC9-219ENST00000461159 NEDD4P46934 1319 aa9.61□□□□□ -0.87
HDAC9-219ENST00000461159 NEBLO76041 1014 aa9.61□□□□□ -0.87
HDAC9-219ENST00000461159 RXRAP19793 462 aa9.61□□□□□ -0.87
HDAC9-219ENST00000461159 BTDP43251 543 aa9.61□□□□□ -0.87
HDAC9-219ENST00000461159 TBC1D8BQ0IIM8 1120 aa9.61□□□□□ -0.87
HDAC9-219ENST00000461159 GPS2Q13227 327 aa9.61□□□□□ -0.87
HDAC9-219ENST00000461159 PICALMQ13492 652 aa9.61□□□□□ -0.87
HDAC9-219ENST00000461159 NAA30Q147X3 362 aaPredicted RBP9.61□□□□□ -0.87
HDAC9-219ENST00000461159 DALRD3Q5D0E6 543 aaKnown RBP9.61□□□□□ -0.87
HDAC9-219ENST00000461159 LEKR1Q6ZMV7 388 aa9.61□□□□□ -0.87
HDAC9-219ENST00000461159 NFXL1Q6ZNB6 911 aa9.61□□□□□ -0.87
HDAC9-219ENST00000461159 CCDC73Q6ZRK6 1079 aa9.61□□□□□ -0.87
HDAC9-219ENST00000461159 CYB5R4Q7L1T6 521 aa9.61□□□□□ -0.87
HDAC9-219ENST00000461159 DHX32Q7L7V1 743 aaKnown RBP9.61□□□□□ -0.87
HDAC9-219ENST00000461159 GTF3C6Q969F1 213 aa9.61□□□□□ -0.87
HDAC9-219ENST00000461159 THOC1Q96FV9 657 aaKnown RBP9.61□□□□□ -0.87
HDAC9-219ENST00000461159 ANO10Q9NW15 660 aa9.61□□□□□ -0.87
HDAC9-219ENST00000461159 ZNF215Q9UL58 517 aaPredicted RBP9.61□□□□□ -0.87
HDAC9-219ENST00000461159 SCAF8Q9UPN6 1271 aaKnown RBP9.61□□□□□ -0.87
HDAC9-219ENST00000461159 QSER1Q2KHR3 1735 aa9.6□□□□□ -0.87
HDAC9-219ENST00000461159 CCDC69A6NI79 296 aa9.6□□□□□ -0.87
HDAC9-219ENST00000461159 SLU7O95391 586 aaKnown RBP9.6□□□□□ -0.87
HDAC9-219ENST00000461159 PDIA5Q14554 519 aa9.6□□□□□ -0.87
HDAC9-219ENST00000461159 CCDC93Q567U6 631 aa9.6□□□□□ -0.87
HDAC9-219ENST00000461159 TEX11Q8IYF3 940 aa9.6□□□□□ -0.87
HDAC9-219ENST00000461159 FBXO18Q8NFZ0 1043 aa9.6□□□□□ -0.87
HDAC9-219ENST00000461159 GOLGA5Q8TBA6 731 aa9.6□□□□□ -0.87
HDAC9-219ENST00000461159 NAT10Q9H0A0 1025 aaKnown RBP9.6□□□□□ -0.87
HDAC9-219ENST00000461159 NCOA5Q9HCD5 579 aaKnown RBP9.6□□□□□ -0.87
HDAC9-219ENST00000461159 DCP1AQ9NPI6 582 aaPredicted RBP9.6□□□□□ -0.87
HDAC9-219ENST00000461159 KCND1Q9NSA2 647 aa9.6□□□□□ -0.87
HDAC9-219ENST00000461159 SPATS2LQ9NUQ6 558 aaKnown RBP9.6□□□□□ -0.87
HDAC9-219ENST00000461159 MCM9Q9NXL9 1143 aa9.6□□□□□ -0.87
HDAC9-219ENST00000461159 FAM200BP0CF97 657 aa9.6□□□□□ -0.87
HDAC9-219ENST00000461159 USP5P45974 858 aa9.6□□□□□ -0.87
HDAC9-219ENST00000461159 RASSF7Q02833 373 aa9.6□□□□□ -0.87
HDAC9-219ENST00000461159 DHX8Q14562 1220 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms