RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 STK24Q9Y6E0 443 aa12.52□□□□□ -0.41
IFT88-204ENST00000461115 MRVI1Q9Y6F6 885 aa12.52□□□□□ -0.41
IFT88-204ENST00000461115 ATRNL1Q5VV63 1379 aa12.51□□□□□ -0.41
IFT88-204ENST00000461115 PTPREP23469 700 aa12.51□□□□□ -0.41
IFT88-204ENST00000461115 TRAPPC10P48553 1259 aa12.51□□□□□ -0.41
IFT88-204ENST00000461115 TYRO3Q06418 890 aa12.51□□□□□ -0.41
IFT88-204ENST00000461115 SLC35G1Q2M3R5 365 aa12.51□□□□□ -0.41
IFT88-204ENST00000461115 CCDC93Q567U6 631 aa12.51□□□□□ -0.41
IFT88-204ENST00000461115 RESP18Q5W5W9 173 aa12.51□□□□□ -0.41
IFT88-204ENST00000461115 GALNT17Q6IS24 598 aa12.51□□□□□ -0.41
IFT88-204ENST00000461115 DEFB132Q7Z7B7 95 aa12.51□□□□□ -0.41
IFT88-204ENST00000461115 FSIP1Q8NA03 581 aa12.51□□□□□ -0.41
IFT88-204ENST00000461115 FAM200AQ8TCP9 573 aa12.51□□□□□ -0.41
IFT88-204ENST00000461115 CCDC17Q96LX7 622 aa12.51□□□□□ -0.41
IFT88-204ENST00000461115 MXD3Q9BW11 206 aa12.51□□□□□ -0.41
IFT88-204ENST00000461115 PDGFDQ9GZP0 370 aaPredicted RBP12.51□□□□□ -0.41
IFT88-204ENST00000461115 KCNQ5Q9NR82 932 aa12.51□□□□□ -0.41
IFT88-204ENST00000461115 SERPINB13Q9UIV8 391 aa12.51□□□□□ -0.41
IFT88-204ENST00000461115 YDJCA8MPS7 323 aa12.5□□□□□ -0.41
IFT88-204ENST00000461115 M0R2N6 131 aa12.5□□□□□ -0.41
IFT88-204ENST00000461115 STK25O00506 426 aa12.5□□□□□ -0.41
IFT88-204ENST00000461115 KINO60870 393 aaKnown RBP12.5□□□□□ -0.41
IFT88-204ENST00000461115 BMP15O95972 392 aa12.5□□□□□ -0.41
IFT88-204ENST00000461115 SHMT1P34896 483 aa12.5□□□□□ -0.41
IFT88-204ENST00000461115 KRT2P35908 639 aa12.5□□□□□ -0.41
IFT88-204ENST00000461115 TGFB2P61812 414 aa12.5□□□□□ -0.41
IFT88-204ENST00000461115 GNL2Q13823 731 aaKnown RBP12.5□□□□□ -0.41
IFT88-204ENST00000461115 PPP4R3BQ5MIZ7 849 aa12.5□□□□□ -0.41
IFT88-204ENST00000461115 SOGA3Q5TF21 947 aa12.5□□□□□ -0.41
IFT88-204ENST00000461115 OXER1Q8TDS5 423 aa12.5□□□□□ -0.41
IFT88-204ENST00000461115 GMLQ99445 158 aa12.5□□□□□ -0.41
IFT88-204ENST00000461115 PLSCR2Q9NRY7 297 aa12.5□□□□□ -0.41
IFT88-204ENST00000461115 MTMR4Q9NYA4 1195 aa12.5□□□□□ -0.41
IFT88-204ENST00000461115 VPS54Q9P1Q0 977 aa12.5□□□□□ -0.41
IFT88-204ENST00000461115 CYTH3O43739 400 aa12.49□□□□□ -0.41
IFT88-204ENST00000461115 ENTPD3O75355 529 aa12.49□□□□□ -0.41
IFT88-204ENST00000461115 VIL1P09327 827 aaKnown RBP12.49□□□□□ -0.41
IFT88-204ENST00000461115 NDUFA8P51970 172 aa12.49□□□□□ -0.41
IFT88-204ENST00000461115 NR5A1Q13285 461 aa12.49□□□□□ -0.41
IFT88-204ENST00000461115 AOC3Q16853 763 aa12.49□□□□□ -0.41
IFT88-204ENST00000461115 SHC4Q6S5L8 630 aa12.49□□□□□ -0.41
IFT88-204ENST00000461115 STAG2Q8N3U4 1231 aa12.49□□□□□ -0.41
IFT88-204ENST00000461115 CCDC82Q8N4S0 544 aa12.49□□□□□ -0.41
IFT88-204ENST00000461115 CEP95Q96GE4 821 aa12.49□□□□□ -0.41
IFT88-204ENST00000461115 FBXO2Q9UK22 296 aaPredicted RBP12.49□□□□□ -0.41
IFT88-204ENST00000461115 CEP131Q9UPN4 1083 aa12.49□□□□□ -0.41
IFT88-204ENST00000461115 SRPRBQ9Y5M8 271 aaKnown RBP12.49□□□□□ -0.41
IFT88-204ENST00000461115 COL4A5P29400 1685 aa12.48□□□□□ -0.41
IFT88-204ENST00000461115 ARFGEF1Q9Y6D6 1849 aa12.48□□□□□ -0.41
IFT88-204ENST00000461115 hCG_1984214I3L0E3 225 aa12.48□□□□□ -0.41
IFT88-204ENST00000461115 ZNF202O95125 648 aa12.48□□□□□ -0.41
IFT88-204ENST00000461115 PFKFB1P16118 471 aa12.48□□□□□ -0.41
IFT88-204ENST00000461115 CALML3P27482 149 aa12.48□□□□□ -0.41
IFT88-204ENST00000461115 SCNN1DP51172 638 aa12.48□□□□□ -0.41
IFT88-204ENST00000461115 NFIAQ12857 509 aa12.48□□□□□ -0.41
IFT88-204ENST00000461115 CAMK4Q16566 473 aa12.48□□□□□ -0.41
IFT88-204ENST00000461115 TATDN1Q6P1N9 297 aa12.48□□□□□ -0.41
IFT88-204ENST00000461115 FOXP4Q8IVH2 680 aaPredicted RBP12.48□□□□□ -0.41
IFT88-204ENST00000461115 ZNF713Q8N859 430 aaPredicted RBP12.48□□□□□ -0.41
IFT88-204ENST00000461115 KRI1Q8N9T8 703 aaKnown RBP12.48□□□□□ -0.41
IFT88-204ENST00000461115 MKL1Q969V6 931 aa12.48□□□□□ -0.41
IFT88-204ENST00000461115 RIOX1Q9H6W3 641 aa12.48□□□□□ -0.41
IFT88-204ENST00000461115 BRMS1Q9HCU9 246 aa12.48□□□□□ -0.41
IFT88-204ENST00000461115 PCDH10Q9P2E7 1040 aa12.48□□□□□ -0.41
IFT88-204ENST00000461115 FAM198AQ9UFP1 575 aa12.48□□□□□ -0.41
IFT88-204ENST00000461115 A0A1B0GVL5 298 aa12.47□□□□□ -0.41
IFT88-204ENST00000461115 F8W031 263 aaPredicted RBP12.47□□□□□ -0.41
IFT88-204ENST00000461115 C21orf2O43822 256 aa12.47□□□□□ -0.41
IFT88-204ENST00000461115 HLA-DOAP06340 250 aa12.47□□□□□ -0.41
IFT88-204ENST00000461115 DPEP1P16444 411 aa12.47□□□□□ -0.41
IFT88-204ENST00000461115 MMP14P50281 582 aa12.47□□□□□ -0.41
IFT88-204ENST00000461115 ASPRV1Q53RT3 343 aa12.47□□□□□ -0.41
IFT88-204ENST00000461115 SASS6Q6UVJ0 657 aa12.47□□□□□ -0.41
IFT88-204ENST00000461115 KIAA0825Q8IV33 1275 aa12.47□□□□□ -0.41
IFT88-204ENST00000461115 FAM43AQ8N2R8 423 aa12.47□□□□□ -0.41
IFT88-204ENST00000461115 MTMR14Q8NCE2 650 aa12.47□□□□□ -0.41
IFT88-204ENST00000461115 DNAJC18Q9H819 358 aa12.47□□□□□ -0.41
IFT88-204ENST00000461115 BARHL2Q9NY43 387 aa12.47□□□□□ -0.41
IFT88-204ENST00000461115 PI4KBQ9UBF8 816 aa12.47□□□□□ -0.41
IFT88-204ENST00000461115 TUBE1Q9UJT0 475 aa12.47□□□□□ -0.41
IFT88-204ENST00000461115 STX8Q9UNK0 236 aa12.47□□□□□ -0.41
IFT88-204ENST00000461115 ESYT2A0FGR8 921 aa12.46□□□□□ -0.41
IFT88-204ENST00000461115 TRIM75PA6NK02 468 aa12.46□□□□□ -0.41
IFT88-204ENST00000461115 KLRF2D3W0D1 207 aa12.46□□□□□ -0.41
IFT88-204ENST00000461115 PPIP5K2O43314 1243 aa12.46□□□□□ -0.41
IFT88-204ENST00000461115 AKR1B1P15121 316 aa12.46□□□□□ -0.41
IFT88-204ENST00000461115 VEGFAP15692 232 aaPredicted RBP12.46□□□□□ -0.41
IFT88-204ENST00000461115 PICALMQ13492 652 aa12.46□□□□□ -0.41
IFT88-204ENST00000461115 SLC4A8Q2Y0W8 1093 aa12.46□□□□□ -0.41
IFT88-204ENST00000461115 EARS2Q5JPH6 523 aaKnown RBP12.46□□□□□ -0.41
IFT88-204ENST00000461115 FKBP1CQ5VVH2 108 aa12.46□□□□□ -0.41
IFT88-204ENST00000461115 SH3BP5LQ7L8J4 393 aa12.46□□□□□ -0.41
IFT88-204ENST00000461115 CKAP2LQ8IYA6 745 aa12.46□□□□□ -0.41
IFT88-204ENST00000461115 RNF214Q8ND24 703 aa12.46□□□□□ -0.41
IFT88-204ENST00000461115 CCDC148Q8NFR7 591 aa12.46□□□□□ -0.41
IFT88-204ENST00000461115 FBXW7Q969H0 707 aa12.46□□□□□ -0.41
IFT88-204ENST00000461115 CABP5Q9NP86 173 aa12.46□□□□□ -0.41
IFT88-204ENST00000461115 KIAA1468Q9P260 1216 aa12.46□□□□□ -0.41
IFT88-204ENST00000461115 SYNPO2Q9UMS6 1093 aa12.46□□□□□ -0.41
IFT88-204ENST00000461115 PCDHA4Q9UN74 947 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms