RNA–Protein interactions for RNA: ENST00000461043.6

ERGIC3-211, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-211ENST00000461043 ARHGAP39Q9C0H5 1083 aa14.28□□□□□ -0.12
ERGIC3-211ENST00000461043 HOXC10Q9NYD6 342 aa14.28□□□□□ -0.12
ERGIC3-211ENST00000461043 TNKSO95271 1327 aa14.27□□□□□ -0.12
ERGIC3-211ENST00000461043 PEX10O60683 326 aa14.27□□□□□ -0.13
ERGIC3-211ENST00000461043 SNHG28P0DPA3 235 aa14.27□□□□□ -0.13
ERGIC3-211ENST00000461043 HSPA4P34932 840 aa14.27□□□□□ -0.13
ERGIC3-211ENST00000461043 RASGRP2Q7LDG7 609 aa14.27□□□□□ -0.13
ERGIC3-211ENST00000461043 CTU1Q7Z7A3 348 aaKnown RBP14.27□□□□□ -0.13
ERGIC3-211ENST00000461043 TRIM47Q96LD4 638 aa14.27□□□□□ -0.13
ERGIC3-211ENST00000461043 FBXO28Q9NVF7 368 aa14.27□□□□□ -0.13
ERGIC3-211ENST00000461043 PPP1R9AQ9ULJ8 1098 aa14.27□□□□□ -0.13
ERGIC3-211ENST00000461043 RABGAP1Q9Y3P9 1069 aa14.27□□□□□ -0.13
ERGIC3-211ENST00000461043 ZSWIM8A7E2V4 1837 aa14.27□□□□□ -0.13
ERGIC3-211ENST00000461043 PLA2G6O60733 806 aa14.26□□□□□ -0.13
ERGIC3-211ENST00000461043 FLOT1O75955 427 aa14.26□□□□□ -0.13
ERGIC3-211ENST00000461043 BMP3P12645 472 aa14.26□□□□□ -0.13
ERGIC3-211ENST00000461043 ERVK-9P63128 1117 aa14.26□□□□□ -0.13
ERGIC3-211ENST00000461043 ERVK-24P63145 666 aa14.26□□□□□ -0.13
ERGIC3-211ENST00000461043 Q3C1V9 767 aa14.26□□□□□ -0.13
ERGIC3-211ENST00000461043 RNF20Q5VTR2 975 aa14.26□□□□□ -0.13
ERGIC3-211ENST00000461043 OTOP1Q7RTM1 612 aa14.26□□□□□ -0.13
ERGIC3-211ENST00000461043 RALYLQ86SE5 291 aaKnown RBP14.26□□□□□ -0.13
ERGIC3-211ENST00000461043 REPS2Q8NFH8 660 aa14.26□□□□□ -0.13
ERGIC3-211ENST00000461043 GPRC5AQ8NFJ5 357 aa14.26□□□□□ -0.13
ERGIC3-211ENST00000461043 DCAF4Q8WV16 495 aa14.26□□□□□ -0.13
ERGIC3-211ENST00000461043 ATG4CQ96DT6 458 aa14.26□□□□□ -0.13
ERGIC3-211ENST00000461043 BTBD7Q9P203 1132 aa14.26□□□□□ -0.13
ERGIC3-211ENST00000461043 GTF3C3Q9Y5Q9 886 aa14.26□□□□□ -0.13
ERGIC3-211ENST00000461043 RAD21O60216 631 aa14.25□□□□□ -0.13
ERGIC3-211ENST00000461043 PDHBP11177 359 aa14.25□□□□□ -0.13
ERGIC3-211ENST00000461043 MCCP23508 829 aa14.25□□□□□ -0.13
ERGIC3-211ENST00000461043 MB21D1Q8N884 522 aa14.25□□□□□ -0.13
ERGIC3-211ENST00000461043 SLF1Q9BQI6 1058 aa14.25□□□□□ -0.13
ERGIC3-211ENST00000461043 UBAC1Q9BSL1 405 aa14.25□□□□□ -0.13
ERGIC3-211ENST00000461043 MTA3Q9BTC8 594 aa14.25□□□□□ -0.13
ERGIC3-211ENST00000461043 USP26Q9BXU7 913 aa14.25□□□□□ -0.13
ERGIC3-211ENST00000461043 FEM1BQ9UK73 627 aa14.25□□□□□ -0.13
ERGIC3-211ENST00000461043 VWA5AO00534 786 aa14.24□□□□□ -0.13
ERGIC3-211ENST00000461043 GNRH1P01148 92 aa14.24□□□□□ -0.13
ERGIC3-211ENST00000461043 SLC1A4P43007 532 aa14.24□□□□□ -0.13
ERGIC3-211ENST00000461043 PSMC4P43686 418 aa14.24□□□□□ -0.13
ERGIC3-211ENST00000461043 ADCK5Q3MIX3 580 aa14.24□□□□□ -0.13
ERGIC3-211ENST00000461043 CHST3Q7LGC8 479 aa14.24□□□□□ -0.13
ERGIC3-211ENST00000461043 PRPF38AQ8NAV1 312 aaKnown RBP14.24□□□□□ -0.13
ERGIC3-211ENST00000461043 PNMA1Q8ND90 353 aa14.24□□□□□ -0.13
ERGIC3-211ENST00000461043 IGDCC4Q8TDY8 1250 aa14.24□□□□□ -0.13
ERGIC3-211ENST00000461043 PAGR1Q9BTK6 254 aa14.24□□□□□ -0.13
ERGIC3-211ENST00000461043 EFCC1Q9HA90 598 aa14.24□□□□□ -0.13
ERGIC3-211ENST00000461043 SENP2Q9HC62 589 aa14.24□□□□□ -0.13
ERGIC3-211ENST00000461043 SNX14Q9Y5W7 946 aa14.24□□□□□ -0.13
ERGIC3-211ENST00000461043 PRC1O43663 620 aa14.23□□□□□ -0.13
ERGIC3-211ENST00000461043 ZKSCAN1P17029 563 aaPredicted RBP14.23□□□□□ -0.13
ERGIC3-211ENST00000461043 MCM5P33992 734 aa14.23□□□□□ -0.13
ERGIC3-211ENST00000461043 FCGRTP55899 365 aa14.23□□□□□ -0.13
ERGIC3-211ENST00000461043 KRT32Q14532 448 aa14.23□□□□□ -0.13
ERGIC3-211ENST00000461043 KIF22Q14807 665 aa14.23□□□□□ -0.13
ERGIC3-211ENST00000461043 TMEM132BQ14DG7 1078 aa14.23□□□□□ -0.13
ERGIC3-211ENST00000461043 PKN2Q16513 984 aaKnown RBP14.23□□□□□ -0.13
ERGIC3-211ENST00000461043 IFIT1BQ5T764 474 aaKnown RBP14.23□□□□□ -0.13
ERGIC3-211ENST00000461043 BTNL9Q6UXG8 535 aa14.23□□□□□ -0.13
ERGIC3-211ENST00000461043 KCTD1Q719H9 257 aa14.23□□□□□ -0.13
ERGIC3-211ENST00000461043 MCOLN1Q9GZU1 580 aa14.23□□□□□ -0.13
ERGIC3-211ENST00000461043 SPATC1LQ9H0A9 340 aa14.23□□□□□ -0.13
ERGIC3-211ENST00000461043 PORCNQ9H237 461 aa14.23□□□□□ -0.13
ERGIC3-211ENST00000461043 KAT14Q9H8E8 782 aa14.23□□□□□ -0.13
ERGIC3-211ENST00000461043 SLC38A10Q9HBR0 1119 aa14.23□□□□□ -0.13
ERGIC3-211ENST00000461043 ZNF214Q9UL59 606 aaPredicted RBP14.23□□□□□ -0.13
ERGIC3-211ENST00000461043 TRIM17Q9Y577 477 aa14.23□□□□□ -0.13
ERGIC3-211ENST00000461043 WDR19Q8NEZ3 1342 aa14.22□□□□□ -0.13
ERGIC3-211ENST00000461043 TMEM232C9JQI7 657 aa14.22□□□□□ -0.13
ERGIC3-211ENST00000461043 SH2B2O14492 632 aaPredicted RBP14.22□□□□□ -0.13
ERGIC3-211ENST00000461043 IFIT3O14879 490 aaKnown RBP14.22□□□□□ -0.13
ERGIC3-211ENST00000461043 STAT2P52630 851 aa14.22□□□□□ -0.13
ERGIC3-211ENST00000461043 EXOSC10Q01780 885 aaKnown RBP14.22□□□□□ -0.13
ERGIC3-211ENST00000461043 ZNF543Q08ER8 600 aa14.22□□□□□ -0.13
ERGIC3-211ENST00000461043 ARHGEF6Q15052 776 aa14.22□□□□□ -0.13
ERGIC3-211ENST00000461043 C8orf34Q49A92 452 aa14.22□□□□□ -0.13
ERGIC3-211ENST00000461043 FAM160B2Q86V87 743 aa14.22□□□□□ -0.13
ERGIC3-211ENST00000461043 NEK1Q96PY6 1258 aa14.22□□□□□ -0.13
ERGIC3-211ENST00000461043 MOV10L1Q9BXT6 1211 aaKnown RBP14.22□□□□□ -0.13
ERGIC3-211ENST00000461043 LY9Q9HBG7 655 aa14.22□□□□□ -0.13
ERGIC3-211ENST00000461043 GPHNQ9NQX3 736 aaPredicted RBP14.22□□□□□ -0.13
ERGIC3-211ENST00000461043 SRRDQ9UH36 339 aa14.22□□□□□ -0.13
ERGIC3-211ENST00000461043 PTPN22Q9Y2R2 807 aa14.22□□□□□ -0.13
ERGIC3-211ENST00000461043 MGAMO43451 1857 aa14.22□□□□□ -0.13
ERGIC3-211ENST00000461043 ATP2A1O14983 1001 aa14.21□□□□□ -0.13
ERGIC3-211ENST00000461043 FMNL1O95466 1100 aaPredicted RBP14.21□□□□□ -0.13
ERGIC3-211ENST00000461043 MAPK4P31152 587 aa14.21□□□□□ -0.13
ERGIC3-211ENST00000461043 PRMT2P55345 433 aa14.21□□□□□ -0.13
ERGIC3-211ENST00000461043 CCNA1P78396 465 aa14.21□□□□□ -0.13
ERGIC3-211ENST00000461043 TROAPQ12815 778 aa14.21□□□□□ -0.13
ERGIC3-211ENST00000461043 WTAPQ15007 396 aa14.21□□□□□ -0.13
ERGIC3-211ENST00000461043 SART3Q15020 963 aaKnown RBP14.21□□□□□ -0.13
ERGIC3-211ENST00000461043 TMEM67Q5HYA8 995 aa14.21□□□□□ -0.13
ERGIC3-211ENST00000461043 TTBK2Q6IQ55 1244 aa14.21□□□□□ -0.13
ERGIC3-211ENST00000461043 FBXO46Q6PJ61 603 aaPredicted RBP14.21□□□□□ -0.13
ERGIC3-211ENST00000461043 SHCBP1Q8NEM2 672 aa14.21□□□□□ -0.13
ERGIC3-211ENST00000461043 CHURC1Q8WUH1 139 aa14.21□□□□□ -0.13
ERGIC3-211ENST00000461043 KIFC2Q96AC6 838 aa14.21□□□□□ -0.13
ERGIC3-211ENST00000461043 CHMP4CQ96CF2 233 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms