RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 MOV10L1Q9BXT6 1211 aaKnown RBP16.42■□□□□ 0.22
SCAMP4-206ENST00000460767 RPAP3Q9H6T3 665 aaPredicted RBP16.42■□□□□ 0.22
SCAMP4-206ENST00000460767 LAMA2P24043 3122 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-206ENST00000460767 DNAH12Q6ZR08 3092 aa16.41■□□□□ 0.22
SCAMP4-206ENST00000460767 CDH23Q9H251 3354 aa16.41■□□□□ 0.22
SCAMP4-206ENST00000460767 ERC2O15083 957 aa16.41■□□□□ 0.22
SCAMP4-206ENST00000460767 COL9A1P20849 921 aa16.41■□□□□ 0.22
SCAMP4-206ENST00000460767 ZYXQ15942 572 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-206ENST00000460767 TTC6Q86TZ1 520 aa16.41■□□□□ 0.22
SCAMP4-206ENST00000460767 LCORLQ8N3X6 602 aa16.41■□□□□ 0.22
SCAMP4-206ENST00000460767 LNPKQ9C0E8 428 aa16.41■□□□□ 0.22
SCAMP4-206ENST00000460767 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.41■□□□□ 0.22
SCAMP4-206ENST00000460767 SAP30BPQ9UHR5 308 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-206ENST00000460767 MAGEB6P1A0A0J9YX57 407 aa16.4■□□□□ 0.22
SCAMP4-206ENST00000460767 CLTBP09497 229 aa16.4■□□□□ 0.22
SCAMP4-206ENST00000460767 ADCYAP1R1P41586 468 aa16.4■□□□□ 0.22
SCAMP4-206ENST00000460767 COG2Q14746 738 aa16.4■□□□□ 0.22
SCAMP4-206ENST00000460767 ABCB5Q2M3G0 1257 aa16.4■□□□□ 0.22
SCAMP4-206ENST00000460767 CERKLQ49MI3 558 aaPredicted RBP16.4■□□□□ 0.22
SCAMP4-206ENST00000460767 FAM47AQ5JRC9 791 aa16.4■□□□□ 0.22
SCAMP4-206ENST00000460767 TICAM2Q86XR7 235 aa16.4■□□□□ 0.22
SCAMP4-206ENST00000460767 PLEKHM2Q8IWE5 1019 aa16.4■□□□□ 0.22
SCAMP4-206ENST00000460767 ACER1Q8TDN7 264 aa16.4■□□□□ 0.22
SCAMP4-206ENST00000460767 SPATC1LQ9H0A9 340 aa16.4■□□□□ 0.22
SCAMP4-206ENST00000460767 PUS7LQ9H0K6 701 aaKnown RBP16.4■□□□□ 0.22
SCAMP4-206ENST00000460767 MROH8Q9H579 483 aa16.4■□□□□ 0.22
SCAMP4-206ENST00000460767 HOXC10Q9NYD6 342 aa16.4■□□□□ 0.22
SCAMP4-206ENST00000460767 BAZ2AQ9UIF9 1905 aaKnown RBP16.4■□□□□ 0.22
SCAMP4-206ENST00000460767 TTC28Q96AY4 2481 aa16.4■□□□□ 0.22
SCAMP4-206ENST00000460767 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.39■□□□□ 0.21
SCAMP4-206ENST00000460767 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.39■□□□□ 0.21
SCAMP4-206ENST00000460767 COBLO75128 1261 aa16.39■□□□□ 0.21
SCAMP4-206ENST00000460767 ERCC3P19447 782 aa16.39■□□□□ 0.21
SCAMP4-206ENST00000460767 DNAJB2P25686 324 aa16.39■□□□□ 0.21
SCAMP4-206ENST00000460767 ITGB8P26012 769 aa16.39■□□□□ 0.21
SCAMP4-206ENST00000460767 GUCY1A2P33402 732 aa16.39■□□□□ 0.21
SCAMP4-206ENST00000460767 TLE2Q04725 743 aa16.39■□□□□ 0.21
SCAMP4-206ENST00000460767 GABPAQ06546 454 aa16.39■□□□□ 0.21
SCAMP4-206ENST00000460767 RAB3GAP1Q15042 981 aa16.39■□□□□ 0.21
SCAMP4-206ENST00000460767 USP38Q8NB14 1042 aa16.39■□□□□ 0.21
SCAMP4-206ENST00000460767 MAML3Q96JK9 1138 aa16.39■□□□□ 0.21
SCAMP4-206ENST00000460767 TOX2Q96NM4 488 aa16.39■□□□□ 0.21
SCAMP4-206ENST00000460767 BCL11AQ9H165 835 aa16.39■□□□□ 0.21
SCAMP4-206ENST00000460767 CABP5Q9NP86 173 aa16.39■□□□□ 0.21
SCAMP4-206ENST00000460767 DCP1AQ9NPI6 582 aaPredicted RBP16.39■□□□□ 0.21
SCAMP4-206ENST00000460767 PRUNE2Q8WUY3 3088 aa16.38■□□□□ 0.21
SCAMP4-206ENST00000460767 SHMT1P34896 483 aa16.38■□□□□ 0.21
SCAMP4-206ENST00000460767 EPHB4P54760 987 aa16.38■□□□□ 0.21
SCAMP4-206ENST00000460767 FPGSQ05932 587 aa16.38■□□□□ 0.21
SCAMP4-206ENST00000460767 GRIN2CQ14957 1233 aa16.38■□□□□ 0.21
SCAMP4-206ENST00000460767 ZSCAN25Q6NSZ9 544 aa16.38■□□□□ 0.21
SCAMP4-206ENST00000460767 ANKRD33Q7Z3H0 272 aa16.38■□□□□ 0.21
SCAMP4-206ENST00000460767 ATXN2LQ8WWM7 1075 aaKnown RBP16.38■□□□□ 0.21
SCAMP4-206ENST00000460767 OSBP2Q969R2 916 aa16.38■□□□□ 0.21
SCAMP4-206ENST00000460767 RNF113AO15541 343 aaKnown RBP16.37■□□□□ 0.21
SCAMP4-206ENST00000460767 MBD4O95243 580 aa16.37■□□□□ 0.21
SCAMP4-206ENST00000460767 ZFYP08048 801 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-206ENST00000460767 PDE4AP27815 886 aa16.37■□□□□ 0.21
SCAMP4-206ENST00000460767 AKNAD1Q5T1N1 836 aa16.37■□□□□ 0.21
SCAMP4-206ENST00000460767 B4GALNT3Q6L9W6 998 aa16.37■□□□□ 0.21
SCAMP4-206ENST00000460767 APPBP2Q92624 585 aa16.37■□□□□ 0.21
SCAMP4-206ENST00000460767 STRBPQ96SI9 672 aaKnown RBP16.37■□□□□ 0.21
SCAMP4-206ENST00000460767 ARMT1Q9H993 441 aa16.37■□□□□ 0.21
SCAMP4-206ENST00000460767 XPNPEP3Q9NQH7 507 aa16.37■□□□□ 0.21
SCAMP4-206ENST00000460767 PLXNA1Q9UIW2 1896 aa16.36■□□□□ 0.21
SCAMP4-206ENST00000460767 PRKAB2O43741 272 aa16.36■□□□□ 0.21
SCAMP4-206ENST00000460767 RARBP10826 455 aa16.36■□□□□ 0.21
SCAMP4-206ENST00000460767 RAG1P15918 1043 aa16.36■□□□□ 0.21
SCAMP4-206ENST00000460767 USP5P45974 858 aa16.36■□□□□ 0.21
SCAMP4-206ENST00000460767 PLCD1P51178 756 aa16.36■□□□□ 0.21
SCAMP4-206ENST00000460767 ZMYM1Q5SVZ6 1142 aa16.36■□□□□ 0.21
SCAMP4-206ENST00000460767 ANO1Q5XXA6 986 aa16.36■□□□□ 0.21
SCAMP4-206ENST00000460767 RNF180Q86T96 592 aa16.36■□□□□ 0.21
SCAMP4-206ENST00000460767 SDR42E1Q8WUS8 393 aa16.36■□□□□ 0.21
SCAMP4-206ENST00000460767 CRNKL1Q9BZJ0 848 aaKnown RBP16.36■□□□□ 0.21
SCAMP4-206ENST00000460767 ZNF576Q9H609 170 aa16.36■□□□□ 0.21
SCAMP4-206ENST00000460767 ATP8A2Q9NTI2 1148 aa16.36■□□□□ 0.21
SCAMP4-206ENST00000460767 DIS3Q9Y2L1 958 aaKnown RBP16.36■□□□□ 0.21
SCAMP4-206ENST00000460767 ZNFX1Q9P2E3 1918 aaKnown RBP16.35■□□□□ 0.21
SCAMP4-206ENST00000460767 MUC3AQ02505 3323 aa16.35■□□□□ 0.21
SCAMP4-206ENST00000460767 A0A1W2PQ45 241 aaPredicted RBP16.35■□□□□ 0.21
SCAMP4-206ENST00000460767 A0A1W2PQY0 241 aa16.35■□□□□ 0.21
SCAMP4-206ENST00000460767 A0A1W2PRG0 241 aa16.35■□□□□ 0.21
SCAMP4-206ENST00000460767 FOXP2O15409 715 aa16.35■□□□□ 0.21
SCAMP4-206ENST00000460767 DSG3P32926 999 aa16.35■□□□□ 0.21
SCAMP4-206ENST00000460767 EVX2Q03828 476 aa16.35■□□□□ 0.21
SCAMP4-206ENST00000460767 FERMT2Q96AC1 680 aa16.35■□□□□ 0.21
SCAMP4-206ENST00000460767 EVI5LQ96CN4 794 aa16.35■□□□□ 0.21
SCAMP4-206ENST00000460767 TSEN34Q9BSV6 310 aaKnown RBP16.35■□□□□ 0.21
SCAMP4-206ENST00000460767 M0R2C6 588 aa16.34■□□□□ 0.21
SCAMP4-206ENST00000460767 SLC25A27O95847 323 aa16.34■□□□□ 0.21
SCAMP4-206ENST00000460767 PLA2G5P39877 138 aa16.34■□□□□ 0.21
SCAMP4-206ENST00000460767 SEPT2Q15019 361 aa16.34■□□□□ 0.21
SCAMP4-206ENST00000460767 RASIP1Q5U651 963 aa16.34■□□□□ 0.21
SCAMP4-206ENST00000460767 GIMAP6Q6P9H5 292 aa16.34■□□□□ 0.21
SCAMP4-206ENST00000460767 TIFAQ96CG3 184 aa16.34■□□□□ 0.21
SCAMP4-206ENST00000460767 GREB1LQ9C091 1923 aaPredicted RBP16.34■□□□□ 0.21
SCAMP4-206ENST00000460767 COL11A1P12107 1806 aaPredicted RBP16.33■□□□□ 0.21
SCAMP4-206ENST00000460767 MOXD2PA6NHM9 499 aa16.33■□□□□ 0.2
SCAMP4-206ENST00000460767 GSG1L2A8MUP6 293 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms