RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 CDK8P49336 464 aa12.57□□□□□ -0.4
HDLBP-227ENST00000458564 PLS1Q14651 629 aa12.57□□□□□ -0.4
HDLBP-227ENST00000458564 UBE3CQ15386 1083 aa12.57□□□□□ -0.4
HDLBP-227ENST00000458564 ZNF697Q5TEC3 545 aa12.57□□□□□ -0.4
HDLBP-227ENST00000458564 ANO1Q5XXA6 986 aa12.57□□□□□ -0.4
HDLBP-227ENST00000458564 RIOX2Q8IUF8 465 aa12.57□□□□□ -0.4
HDLBP-227ENST00000458564 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.57□□□□□ -0.4
HDLBP-227ENST00000458564 SIRT2Q8IXJ6 389 aa12.57□□□□□ -0.4
HDLBP-227ENST00000458564 AMOTL1Q8IY63 956 aa12.57□□□□□ -0.4
HDLBP-227ENST00000458564 HAUS7Q99871 368 aa12.57□□□□□ -0.4
HDLBP-227ENST00000458564 KANSL2Q9H9L4 492 aa12.57□□□□□ -0.4
HDLBP-227ENST00000458564 ZBTB40Q9NUA8 1239 aa12.57□□□□□ -0.4
HDLBP-227ENST00000458564 PHF24Q9UPV7 400 aa12.57□□□□□ -0.4
HDLBP-227ENST00000458564 MYH8P13535 1937 aa12.56□□□□□ -0.4
HDLBP-227ENST00000458564 USP17L12C9JPN9 530 aa12.56□□□□□ -0.4
HDLBP-227ENST00000458564 USP17L21D6R901 530 aa12.56□□□□□ -0.4
HDLBP-227ENST00000458564 RARBP10826 455 aa12.56□□□□□ -0.4
HDLBP-227ENST00000458564 COPB2P35606 906 aa12.56□□□□□ -0.4
HDLBP-227ENST00000458564 ADCYAP1R1P41586 468 aa12.56□□□□□ -0.4
HDLBP-227ENST00000458564 SMAD3P84022 425 aaKnown RBP12.56□□□□□ -0.4
HDLBP-227ENST00000458564 SHHQ15465 462 aa12.56□□□□□ -0.4
HDLBP-227ENST00000458564 PRAMEF19Q5SWL8 479 aa12.56□□□□□ -0.4
HDLBP-227ENST00000458564 REPS2Q8NFH8 660 aa12.56□□□□□ -0.4
HDLBP-227ENST00000458564 PRDM5Q9NQX1 630 aaPredicted RBP12.56□□□□□ -0.4
HDLBP-227ENST00000458564 ZNF214Q9UL59 606 aaPredicted RBP12.56□□□□□ -0.4
HDLBP-227ENST00000458564 PPP1R9AQ9ULJ8 1098 aa12.56□□□□□ -0.4
HDLBP-227ENST00000458564 DDX19BQ9UMR2 479 aa12.56□□□□□ -0.4
HDLBP-227ENST00000458564 MUC3AQ02505 3323 aa12.55□□□□□ -0.4
HDLBP-227ENST00000458564 BAZ2AQ9UIF9 1905 aaKnown RBP12.55□□□□□ -0.4
HDLBP-227ENST00000458564 TRIM43BA6NCK2 446 aa12.55□□□□□ -0.4
HDLBP-227ENST00000458564 SMIM22K7EJ46 135 aa12.55□□□□□ -0.4
HDLBP-227ENST00000458564 APBB1O00213 710 aa12.55□□□□□ -0.4
HDLBP-227ENST00000458564 VWA5AO00534 786 aa12.55□□□□□ -0.4
HDLBP-227ENST00000458564 EEF2P13639 858 aaKnown RBP12.55□□□□□ -0.4
HDLBP-227ENST00000458564 ZNF792Q3KQV3 632 aa12.55□□□□□ -0.4
HDLBP-227ENST00000458564 SLFNL1Q499Z3 407 aa12.55□□□□□ -0.4
HDLBP-227ENST00000458564 C9orf50Q5SZB4 431 aa12.55□□□□□ -0.4
HDLBP-227ENST00000458564 BADQ92934 168 aa12.55□□□□□ -0.4
HDLBP-227ENST00000458564 TRIM43Q96BQ3 446 aaPredicted RBP12.55□□□□□ -0.4
HDLBP-227ENST00000458564 DDRGK1Q96HY6 314 aa12.55□□□□□ -0.4
HDLBP-227ENST00000458564 MMP19Q99542 508 aa12.55□□□□□ -0.4
HDLBP-227ENST00000458564 TINF2Q9BSI4 451 aa12.55□□□□□ -0.4
HDLBP-227ENST00000458564 COL25A1Q9BXS0 654 aaPredicted RBP12.55□□□□□ -0.4
HDLBP-227ENST00000458564 BOLA2Q9H3K6 86 aa12.55□□□□□ -0.4
HDLBP-227ENST00000458564 GOPCQ9HD26 462 aa12.55□□□□□ -0.4
HDLBP-227ENST00000458564 XPNPEP3Q9NQH7 507 aa12.55□□□□□ -0.4
HDLBP-227ENST00000458564 FBXO28Q9NVF7 368 aa12.55□□□□□ -0.4
HDLBP-227ENST00000458564 GREB1LQ9C091 1923 aaPredicted RBP12.54□□□□□ -0.4
HDLBP-227ENST00000458564 CYP2D7A0A087X1C5 515 aa12.54□□□□□ -0.4
HDLBP-227ENST00000458564 ZNF865P0CJ78 1059 aaPredicted RBP12.54□□□□□ -0.4
HDLBP-227ENST00000458564 STAT3P40763 770 aa12.54□□□□□ -0.4
HDLBP-227ENST00000458564 TLE2Q04725 743 aa12.54□□□□□ -0.4
HDLBP-227ENST00000458564 KCTD2Q14681 263 aa12.54□□□□□ -0.4
HDLBP-227ENST00000458564 CTR9Q6PD62 1173 aa12.54□□□□□ -0.4
HDLBP-227ENST00000458564 SH3RF1Q7Z6J0 888 aa12.54□□□□□ -0.4
HDLBP-227ENST00000458564 RNF180Q86T96 592 aa12.54□□□□□ -0.4
HDLBP-227ENST00000458564 MSL3Q8N5Y2 521 aaKnown RBP12.54□□□□□ -0.4
HDLBP-227ENST00000458564 FAM161BQ96MY7 647 aa12.54□□□□□ -0.4
HDLBP-227ENST00000458564 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.54□□□□□ -0.4
HDLBP-227ENST00000458564 ARPP21Q9UBL0 812 aaPredicted RBP12.54□□□□□ -0.4
HDLBP-227ENST00000458564 TACC3Q9Y6A5 838 aa12.54□□□□□ -0.4
HDLBP-227ENST00000458564 COL11A1P12107 1806 aaPredicted RBP12.53□□□□□ -0.4
HDLBP-227ENST00000458564 TMEM265A0A087WTH1 108 aa12.53□□□□□ -0.4
HDLBP-227ENST00000458564 KIAA0355O15063 1070 aa12.53□□□□□ -0.4
HDLBP-227ENST00000458564 ADAMTS4O75173 837 aa12.53□□□□□ -0.4
HDLBP-227ENST00000458564 MYCNP04198 464 aaPredicted RBP12.53□□□□□ -0.4
HDLBP-227ENST00000458564 CHGBP05060 677 aa12.53□□□□□ -0.4
HDLBP-227ENST00000458564 PGK2P07205 417 aa12.53□□□□□ -0.4
HDLBP-227ENST00000458564 CLTBP09497 229 aa12.53□□□□□ -0.4
HDLBP-227ENST00000458564 AKR1A1P14550 325 aa12.53□□□□□ -0.4
HDLBP-227ENST00000458564 ZSCAN25Q6NSZ9 544 aa12.53□□□□□ -0.4
HDLBP-227ENST00000458564 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.53□□□□□ -0.4
HDLBP-227ENST00000458564 FERMT2Q96AC1 680 aa12.53□□□□□ -0.4
HDLBP-227ENST00000458564 CDX2Q99626 313 aaPredicted RBP12.53□□□□□ -0.4
HDLBP-227ENST00000458564 SEMA6BQ9H3T3 888 aa12.53□□□□□ -0.4
HDLBP-227ENST00000458564 CHMP4BQ9H444 224 aaKnown RBP12.53□□□□□ -0.4
HDLBP-227ENST00000458564 SLC4A4Q9Y6R1 1079 aa12.53□□□□□ -0.4
HDLBP-227ENST00000458564 MYH7P12883 1935 aa12.52□□□□□ -0.4
HDLBP-227ENST00000458564 DNAJC25-GNG10A0A024R161 153 aa12.52□□□□□ -0.41
HDLBP-227ENST00000458564 A0A1W2PQ45 241 aaPredicted RBP12.52□□□□□ -0.41
HDLBP-227ENST00000458564 A0A1W2PQY0 241 aa12.52□□□□□ -0.41
HDLBP-227ENST00000458564 ATP2A1O14983 1001 aa12.52□□□□□ -0.41
HDLBP-227ENST00000458564 PGK1P00558 417 aa12.52□□□□□ -0.41
HDLBP-227ENST00000458564 TAL1P17542 331 aaPredicted RBP12.52□□□□□ -0.41
HDLBP-227ENST00000458564 ITGB8P26012 769 aa12.52□□□□□ -0.41
HDLBP-227ENST00000458564 SBK1Q52WX2 424 aa12.52□□□□□ -0.41
HDLBP-227ENST00000458564 FAM83BQ5T0W9 1011 aa12.52□□□□□ -0.41
HDLBP-227ENST00000458564 GIMAP6Q6P9H5 292 aa12.52□□□□□ -0.41
HDLBP-227ENST00000458564 SAMD1Q6SPF0 538 aaPredicted RBP12.52□□□□□ -0.41
HDLBP-227ENST00000458564 MAMDC4Q6UXC1 1216 aa12.52□□□□□ -0.41
HDLBP-227ENST00000458564 ANKRD33Q7Z3H0 272 aa12.52□□□□□ -0.41
HDLBP-227ENST00000458564 TOX2Q96NM4 488 aa12.52□□□□□ -0.41
HDLBP-227ENST00000458564 TSEN34Q9BSV6 310 aaKnown RBP12.52□□□□□ -0.41
HDLBP-227ENST00000458564 TEX13BQ9BXU2 312 aa12.52□□□□□ -0.41
HDLBP-227ENST00000458564 PUS7LQ9H0K6 701 aaKnown RBP12.52□□□□□ -0.41
HDLBP-227ENST00000458564 TTYH1Q9H313 450 aaPredicted RBP12.52□□□□□ -0.41
HDLBP-227ENST00000458564 CNPY2Q9Y2B0 182 aa12.52□□□□□ -0.41
HDLBP-227ENST00000458564 COG6Q9Y2V7 657 aa12.52□□□□□ -0.41
HDLBP-227ENST00000458564 SYNGAP1Q96PV0 1343 aa12.52□□□□□ -0.41
HDLBP-227ENST00000458564 ZNFX1Q9P2E3 1918 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms