RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 AKAP17AQ02040 695 aaKnown RBP5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 STK38Q15208 465 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 JMYQ8N9B5 988 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 GLIS3Q8NEA6 775 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 NSMCE1Q8WV22 266 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 MKRN1Q9UHC7 482 aaKnown RBP5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 TMEM131LA2VDJ0 1609 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 KLF18A0A0U1RQI7 1052 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 NDUFAB1O14561 156 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 INPP5BP32019 993 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 CTDSPL2Q05D32 466 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 KRT31Q15323 416 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 NFRKBQ6P4R8 1299 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 LEKR1Q6ZMV7 388 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 MB21D2Q8IYB1 491 aaPredicted RBP5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 SPATA4Q8NEY3 305 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 EPB41L4BQ9H329 900 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 ABHD10Q9NUJ1 306 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 HAUS2Q9NVX0 235 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 MYO6Q9UM54 1294 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 PACSIN2Q9UNF0 486 aaPredicted RBP5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 ARHGEF10O15013 1369 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 MATR3P43243 847 aaKnown RBP eCLIP5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 MYO1EQ12965 1108 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 STIM1Q13586 685 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 NAALADL2Q58DX5 795 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 PAPD7Q5XG87 772 aaKnown RBP5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 SH3RF1Q7Z6J0 888 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 CEP57Q86XR8 500 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 TBC1D10CQ8IV04 446 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 KBTBD3Q8NAB2 608 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 AFAP1L1Q8TED9 768 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 CABS1Q96KC9 395 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 SYT15Q9BQS2 421 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 RBM12Q9NTZ6 932 aaKnown RBP5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 AXIN2Q9Y2T1 843 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 C3P01024 1663 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 PRRC2BQ5JSZ5 2229 aaKnown RBP5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 ATP5JP18859 108 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 FOXB2Q5VYV0 432 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 RESP18Q5W5W9 173 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 UBE3BQ7Z3V4 1068 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 MLXIPQ9HAP2 919 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 SLC39A2Q9NP94 309 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 ARHGAP20Q9P2F6 1191 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 TRIM33Q9UPN9 1127 aa5.12□□□□□ -1.59
DEPDC1-202ENST00000456315 PHF20L1A8MW92 1017 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 EBAG9O00559 213 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 CHUKO15111 745 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 NEBLO76041 1014 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 IVLP07476 585 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 ITGA6P23229 1130 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 PTPREP23469 700 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 RNASE9P60153 205 aaKnown RBP5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 SPDYE1Q8NFV5 336 aaPredicted RBP5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 CCT6BQ92526 530 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 PRRC2CQ9Y520 2896 aaKnown RBP5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 NDUFA10O95299 355 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 ZBTB48P10074 688 aaPredicted RBP5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 AFMP43652 599 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 NAP1L1P55209 391 aaKnown RBP5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 C8orf76Q96K31 380 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 EPN1Q9Y6I3 576 aaPredicted RBP5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 PP2D1A8MPX8 630 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 RBAK-RBAKDNI3L0D1 243 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 ATP2C2O75185 946 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 PPP1R37O75864 691 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 CCDC175P0C221 793 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 YY1P25490 414 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 SMTNP53814 917 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 MKRN4PQ13434 485 aaPredicted RBP5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 TCIRG1Q13488 830 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 TNNI3KQ59H18 835 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 RNF20Q5VTR2 975 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 APOA5Q6Q788 366 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 DNAJC14Q6Y2X3 702 aaPredicted RBP5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 CCDC91Q7Z6B0 441 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 FCHSD1Q86WN1 690 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 MARCH10Q8NA82 808 aaPredicted RBP5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 OR8K1Q8NGG5 319 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 AGAP11Q8TF27 550 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 CAPS2Q9BXY5 557 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 TRIM6Q9C030 488 aaPredicted RBP5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 TAB2Q9NYJ8 693 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 FPGT-TNNI3KV9GXZ4 949 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 RFX7Q2KHR2 1363 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 GOLGA6CA6NDK9 693 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 TLR2O60603 784 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 GOLGA6DP0CG33 693 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 EIF5P55010 431 aaKnown RBP5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 ZC2HC1CQ53FD0 456 aaPredicted RBP5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 ZDHHC14Q8IZN3 488 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 LMBR1Q8WVP7 490 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 SMARCC1Q92922 1105 aaPredicted RBP5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 ZNF622Q969S3 477 aaKnown RBP eCLIP5.11□□□□□ -1.593e-8■□□□□ 8.8
DEPDC1-202ENST00000456315 CCDC85AQ96PX6 553 aaPredicted RBP5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 GOLGA6AQ9NYA3 693 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 ANKARQ7Z5J8 1434 aa5.11□□□□□ -1.59
DEPDC1-202ENST00000456315 MYH3P11055 1940 aa5.1□□□□□ -1.59
DEPDC1-202ENST00000456315 MYH4Q9Y623 1939 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms