RNA–Protein interactions for RNA: ENST00000455586.6

VSIG4-204, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSIG4, Length 2,190 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-204ENST00000455586 CLIP2Q9UDT6 1046 aa10.67□□□□□ -0.7
VSIG4-204ENST00000455586 CEP131Q9UPN4 1083 aa10.67□□□□□ -0.7
VSIG4-204ENST00000455586 GJA3Q9Y6H8 435 aa10.67□□□□□ -0.7
VSIG4-204ENST00000455586 FRMPD2Q68DX3 1309 aaPredicted RBP10.67□□□□□ -0.7
VSIG4-204ENST00000455586 USP17L5A8MUK1 530 aa10.67□□□□□ -0.7
VSIG4-204ENST00000455586 CYTH3O43739 400 aa10.67□□□□□ -0.7
VSIG4-204ENST00000455586 RAD21O60216 631 aa10.67□□□□□ -0.7
VSIG4-204ENST00000455586 PTMAP06454 111 aaKnown RBP10.67□□□□□ -0.7
VSIG4-204ENST00000455586 ATP2B1P20020 1258 aa10.67□□□□□ -0.7
VSIG4-204ENST00000455586 ZNF165P49910 485 aa10.67□□□□□ -0.7
VSIG4-204ENST00000455586 GNAQP50148 359 aa10.67□□□□□ -0.7
VSIG4-204ENST00000455586 TOB1P50616 345 aaPredicted RBP10.67□□□□□ -0.7
VSIG4-204ENST00000455586 GRIPAP1Q4V328 841 aa10.67□□□□□ -0.7
VSIG4-204ENST00000455586 SOGA3Q5TF21 947 aa10.67□□□□□ -0.7
VSIG4-204ENST00000455586 CIAPIN1Q6FI81 312 aa10.67□□□□□ -0.7
VSIG4-204ENST00000455586 TIGD1Q96MW7 591 aa10.67□□□□□ -0.7
VSIG4-204ENST00000455586 UBA5Q9GZZ9 404 aa10.67□□□□□ -0.7
VSIG4-204ENST00000455586 DNAJC25Q9H1X3 360 aa10.67□□□□□ -0.7
VSIG4-204ENST00000455586 VAT1LQ9HCJ6 419 aa10.67□□□□□ -0.7
VSIG4-204ENST00000455586 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.67□□□□□ -0.7
VSIG4-204ENST00000455586 ASTN2O75129 1339 aaPredicted RBP10.67□□□□□ -0.7
VSIG4-204ENST00000455586 FAM237AA0A1B0GTK4 181 aa10.66□□□□□ -0.7
VSIG4-204ENST00000455586 ZNF202O95125 648 aa10.66□□□□□ -0.7
VSIG4-204ENST00000455586 SCG2P13521 617 aa10.66□□□□□ -0.7
VSIG4-204ENST00000455586 MSNP26038 577 aaKnown RBP10.66□□□□□ -0.7
VSIG4-204ENST00000455586 GRM4Q14833 912 aa10.66□□□□□ -0.7
VSIG4-204ENST00000455586 EARS2Q5JPH6 523 aaKnown RBP10.66□□□□□ -0.7
VSIG4-204ENST00000455586 RESP18Q5W5W9 173 aa10.66□□□□□ -0.7
VSIG4-204ENST00000455586 LUZP1Q86V48 1076 aa10.66□□□□□ -0.7
VSIG4-204ENST00000455586 KRI1Q8N9T8 703 aaKnown RBP10.66□□□□□ -0.7
VSIG4-204ENST00000455586 FHDC1Q9C0D6 1143 aaPredicted RBP10.66□□□□□ -0.7
VSIG4-204ENST00000455586 TMEM39BQ9GZU3 492 aa10.66□□□□□ -0.7
VSIG4-204ENST00000455586 ANO10Q9NW15 660 aa10.66□□□□□ -0.7
VSIG4-204ENST00000455586 MTMR4Q9NYA4 1195 aa10.66□□□□□ -0.7
VSIG4-204ENST00000455586 ZNF70Q9UC06 446 aaPredicted RBP10.66□□□□□ -0.7
VSIG4-204ENST00000455586 NOL7Q9UMY1 257 aaKnown RBP10.66□□□□□ -0.7
VSIG4-204ENST00000455586 HPSEQ9Y251 543 aa10.66□□□□□ -0.7
VSIG4-204ENST00000455586 MORC2Q9Y6X9 1032 aaPredicted RBP10.66□□□□□ -0.7
VSIG4-204ENST00000455586 SYKP43405 635 aa10.66□□□□□ -0.7
VSIG4-204ENST00000455586 PFKFB3Q16875 520 aaPredicted RBP10.66□□□□□ -0.7
VSIG4-204ENST00000455586 SHC4Q6S5L8 630 aa10.66□□□□□ -0.7
VSIG4-204ENST00000455586 MIGA2Q7L4E1 593 aa10.66□□□□□ -0.7
VSIG4-204ENST00000455586 SAMD7Q7Z3H4 446 aa10.66□□□□□ -0.7
VSIG4-204ENST00000455586 CSRNP1Q96S65 589 aa10.66□□□□□ -0.7
VSIG4-204ENST00000455586 PI4KBQ9UBF8 816 aa10.66□□□□□ -0.7
VSIG4-204ENST00000455586 BRCA1P38398 1863 aaKnown RBP10.66□□□□□ -0.7
VSIG4-204ENST00000455586 PLIN4Q96Q06 1357 aa10.65□□□□□ -0.7
VSIG4-204ENST00000455586 WNT10BO00744 389 aa10.65□□□□□ -0.7
VSIG4-204ENST00000455586 PLCB2Q00722 1185 aa10.65□□□□□ -0.7
VSIG4-204ENST00000455586 ZRSR1Q15695 479 aaKnown RBP10.65□□□□□ -0.7
VSIG4-204ENST00000455586 TYW1BQ6NUM6 668 aa10.65□□□□□ -0.7
VSIG4-204ENST00000455586 HOMER1Q86YM7 354 aa10.65□□□□□ -0.7
VSIG4-204ENST00000455586 CEP57L1Q8IYX8 460 aa10.65□□□□□ -0.7
VSIG4-204ENST00000455586 NAT10Q9H0A0 1025 aaKnown RBP10.65□□□□□ -0.7
VSIG4-204ENST00000455586 CABP5Q9NP86 173 aa10.65□□□□□ -0.7
VSIG4-204ENST00000455586 HDAC9Q9UKV0 1011 aa10.65□□□□□ -0.7
VSIG4-204ENST00000455586 KLRF2D3W0D1 207 aa10.65□□□□□ -0.71
VSIG4-204ENST00000455586 BMP15O95972 392 aa10.65□□□□□ -0.71
VSIG4-204ENST00000455586 SEPT2Q15019 361 aa10.65□□□□□ -0.71
VSIG4-204ENST00000455586 CERKLQ49MI3 558 aaPredicted RBP10.65□□□□□ -0.71
VSIG4-204ENST00000455586 TBC1D10BQ4KMP7 808 aaPredicted RBP10.65□□□□□ -0.71
VSIG4-204ENST00000455586 ARHGAP27Q6ZUM4 889 aa10.65□□□□□ -0.71
VSIG4-204ENST00000455586 ILDR2Q71H61 639 aa10.65□□□□□ -0.71
VSIG4-204ENST00000455586 LZTS2Q9BRK4 669 aa10.65□□□□□ -0.71
VSIG4-204ENST00000455586 TRIM34Q9BYJ4 488 aa10.65□□□□□ -0.71
VSIG4-204ENST00000455586 GPCPD1Q9NPB8 672 aa10.65□□□□□ -0.71
VSIG4-204ENST00000455586 SH3GLB2Q9NR46 395 aa10.65□□□□□ -0.71
VSIG4-204ENST00000455586 KIAA1468Q9P260 1216 aa10.65□□□□□ -0.71
VSIG4-204ENST00000455586 ZKSCAN5Q9Y2L8 839 aa10.65□□□□□ -0.71
VSIG4-204ENST00000455586 MYO3BQ8WXR4 1341 aa10.64□□□□□ -0.71
VSIG4-204ENST00000455586 ZNF541Q9H0D2 1346 aa10.64□□□□□ -0.71
VSIG4-204ENST00000455586 SIPA1L1O43166 1804 aa10.64□□□□□ -0.71
VSIG4-204ENST00000455586 FER1L6Q2WGJ9 1857 aa10.64□□□□□ -0.71
VSIG4-204ENST00000455586 MYH8P13535 1937 aa10.64□□□□□ -0.71
VSIG4-204ENST00000455586 IGKV6D-41A0A0C4DH26 115 aa10.64□□□□□ -0.71
VSIG4-204ENST00000455586 PALM3A6NDB9 673 aaPredicted RBP10.64□□□□□ -0.71
VSIG4-204ENST00000455586 TRIM75PA6NK02 468 aa10.64□□□□□ -0.71
VSIG4-204ENST00000455586 WNT7AO00755 349 aa10.64□□□□□ -0.71
VSIG4-204ENST00000455586 TOP1P11387 765 aaKnown RBP10.64□□□□□ -0.71
VSIG4-204ENST00000455586 PTPREP23469 700 aa10.64□□□□□ -0.71
VSIG4-204ENST00000455586 CALML3P27482 149 aa10.64□□□□□ -0.71
VSIG4-204ENST00000455586 GMPSP49915 693 aaPredicted RBP10.64□□□□□ -0.71
VSIG4-204ENST00000455586 NPY5RQ15761 445 aa10.64□□□□□ -0.71
VSIG4-204ENST00000455586 TTBK2Q6IQ55 1244 aa10.64□□□□□ -0.71
VSIG4-204ENST00000455586 C11orf57Q6ZUT1 292 aaPredicted RBP10.64□□□□□ -0.71
VSIG4-204ENST00000455586 ZNF579Q8NAF0 562 aaKnown RBP10.64□□□□□ -0.71
VSIG4-204ENST00000455586 SPON1Q9HCB6 807 aa10.64□□□□□ -0.71
VSIG4-204ENST00000455586 MYOZ2Q9NPC6 264 aa10.64□□□□□ -0.71
VSIG4-204ENST00000455586 SWAP70Q9UH65 585 aa10.64□□□□□ -0.71
VSIG4-204ENST00000455586 FBXO2Q9UK22 296 aaPredicted RBP10.64□□□□□ -0.71
VSIG4-204ENST00000455586 PCDHB6Q9Y5E3 794 aa10.64□□□□□ -0.71
VSIG4-204ENST00000455586 CNTNAP1P78357 1384 aa10.64□□□□□ -0.71
VSIG4-204ENST00000455586 GOLGA6L19H0YKK7 550 aa10.63□□□□□ -0.71
VSIG4-204ENST00000455586 PDHBP11177 359 aa10.63□□□□□ -0.71
VSIG4-204ENST00000455586 SLC16A2P36021 539 aa10.63□□□□□ -0.71
VSIG4-204ENST00000455586 NLRP5P59047 1200 aa10.63□□□□□ -0.71
VSIG4-204ENST00000455586 KCTD1Q719H9 257 aa10.63□□□□□ -0.71
VSIG4-204ENST00000455586 CCDC84Q86UT8 332 aaPredicted RBP10.63□□□□□ -0.71
VSIG4-204ENST00000455586 FAM177A1Q8N128 213 aaPredicted RBP10.63□□□□□ -0.71
VSIG4-204ENST00000455586 AGBL3Q8NEM8 1001 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms