RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 TM4SF1P30408 202 aa5.15□□□□□ -1.59
RBM39-220ENST00000455343 CHRNA5P30532 468 aa5.15□□□□□ -1.59
RBM39-220ENST00000455343 RFC4P35249 363 aa5.15□□□□□ -1.59
RBM39-220ENST00000455343 SGO2Q562F6 1265 aa5.15□□□□□ -1.59
RBM39-220ENST00000455343 IFNL2Q8IZJ0 200 aa5.15□□□□□ -1.59
RBM39-220ENST00000455343 SMG8Q8ND04 991 aaKnown RBP5.15□□□□□ -1.59
RBM39-220ENST00000455343 SUGCTQ9HAC7 445 aa5.15□□□□□ -1.59
RBM39-220ENST00000455343 EGFL7Q9UHF1 273 aa5.15□□□□□ -1.59
RBM39-220ENST00000455343 USTQ9Y2C2 406 aa5.15□□□□□ -1.59
RBM39-220ENST00000455343 MAP2P11137 1827 aaKnown RBP5.15□□□□□ -1.59
RBM39-220ENST00000455343 TAF1LQ8IZX4 1826 aa5.14□□□□□ -1.59
RBM39-220ENST00000455343 KIF13BQ9NQT8 1826 aa5.14□□□□□ -1.59
RBM39-220ENST00000455343 METTL12A8MUP2 240 aa5.14□□□□□ -1.59
RBM39-220ENST00000455343 ERVV-2B6SEH9 535 aa5.14□□□□□ -1.59
RBM39-220ENST00000455343 POLRMTO00411 1230 aaKnown RBP5.14□□□□□ -1.59
RBM39-220ENST00000455343 DLGAP3O95886 979 aa5.14□□□□□ -1.59
RBM39-220ENST00000455343 POLR3DP05423 398 aaPredicted RBP5.14□□□□□ -1.59
RBM39-220ENST00000455343 LMNB1P20700 586 aa5.14□□□□□ -1.59
RBM39-220ENST00000455343 MAP4P27816 1152 aaKnown RBP5.14□□□□□ -1.59
RBM39-220ENST00000455343 RGS19P49795 217 aa5.14□□□□□ -1.59
RBM39-220ENST00000455343 DTX1Q86Y01 620 aa5.14□□□□□ -1.59
RBM39-220ENST00000455343 NRSN2Q9GZP1 204 aa5.14□□□□□ -1.59
RBM39-220ENST00000455343 CYP4F12Q9HCS2 524 aa5.14□□□□□ -1.59
RBM39-220ENST00000455343 WASHC2AQ641Q2 1341 aa5.14□□□□□ -1.59
RBM39-220ENST00000455343 USP42Q9H9J4 1324 aaKnown RBP5.14□□□□□ -1.59
RBM39-220ENST00000455343 KAT6BQ8WYB5 2073 aa5.14□□□□□ -1.59
RBM39-220ENST00000455343 ST20-MTHFSA0A0A6YYL1 179 aa5.13□□□□□ -1.59
RBM39-220ENST00000455343 ICMTO60725 284 aa5.13□□□□□ -1.59
RBM39-220ENST00000455343 ADAMTS4O75173 837 aa5.13□□□□□ -1.59
RBM39-220ENST00000455343 GP2P55259 537 aaKnown RBP5.13□□□□□ -1.59
RBM39-220ENST00000455343 CCNJLQ8IV13 435 aa5.13□□□□□ -1.59
RBM39-220ENST00000455343 GALNT12Q8IXK2 581 aa5.13□□□□□ -1.59
RBM39-220ENST00000455343 C12orf50Q8NA57 414 aaPredicted RBP5.13□□□□□ -1.59
RBM39-220ENST00000455343 SRP68Q9UHB9 627 aaKnown RBP5.13□□□□□ -1.59
RBM39-220ENST00000455343 OAS3Q9Y6K5 1087 aaKnown RBP5.13□□□□□ -1.59
RBM39-220ENST00000455343 PASKQ96RG2 1323 aa5.13□□□□□ -1.59
RBM39-220ENST00000455343 CNTNAP1P78357 1384 aa5.13□□□□□ -1.59
RBM39-220ENST00000455343 C4AP0C0L4 1744 aa5.12□□□□□ -1.59
RBM39-220ENST00000455343 A0A096LPE4 126 aa5.12□□□□□ -1.59
RBM39-220ENST00000455343 A0A1W2PP55 124 aa5.12□□□□□ -1.59
RBM39-220ENST00000455343 A0A1W2PPZ6 126 aa5.12□□□□□ -1.59
RBM39-220ENST00000455343 WDR64B1ANS9 1081 aa5.12□□□□□ -1.59
RBM39-220ENST00000455343 H3BRB1 525 aa5.12□□□□□ -1.59
RBM39-220ENST00000455343 CRKLP46109 303 aaKnown RBP5.12□□□□□ -1.59
RBM39-220ENST00000455343 CTCFP49711 727 aaPredicted RBP5.12□□□□□ -1.59
RBM39-220ENST00000455343 GSTM4Q03013 218 aa5.12□□□□□ -1.59
RBM39-220ENST00000455343 B4GALNT3Q6L9W6 998 aa5.12□□□□□ -1.59
RBM39-220ENST00000455343 ABHD8Q96I13 439 aa5.12□□□□□ -1.59
RBM39-220ENST00000455343 MFSD14AQ96MC6 490 aa5.12□□□□□ -1.59
RBM39-220ENST00000455343 TCF12Q99081 682 aa5.12□□□□□ -1.59
RBM39-220ENST00000455343 TUT1Q9H6E5 874 aaKnown RBP5.12□□□□□ -1.59
RBM39-220ENST00000455343 EIF4EBP3O60516 100 aaPredicted RBP5.11□□□□□ -1.59
RBM39-220ENST00000455343 F13BP05160 661 aa5.11□□□□□ -1.59
RBM39-220ENST00000455343 HSP90AB1P08238 724 aaKnown RBP5.11□□□□□ -1.59
RBM39-220ENST00000455343 HOXA10P31260 410 aaPredicted RBP5.11□□□□□ -1.59
RBM39-220ENST00000455343 GRIA4P48058 902 aa5.11□□□□□ -1.59
RBM39-220ENST00000455343 SERPINB4P48594 390 aa5.11□□□□□ -1.59
RBM39-220ENST00000455343 IRAK1P51617 712 aa5.11□□□□□ -1.59
RBM39-220ENST00000455343 LBX1P52954 281 aa5.11□□□□□ -1.59
RBM39-220ENST00000455343 PCDH1Q08174 1060 aa5.11□□□□□ -1.59
RBM39-220ENST00000455343 NFIXQ14938 502 aa5.11□□□□□ -1.59
RBM39-220ENST00000455343 ECM1Q16610 540 aa5.11□□□□□ -1.59
RBM39-220ENST00000455343 EXOSC6Q5RKV6 272 aaKnown RBP5.11□□□□□ -1.59
RBM39-220ENST00000455343 KRTAP1-3Q8IUG1 177 aa5.11□□□□□ -1.59
RBM39-220ENST00000455343 GLYCTKQ8IVS8 523 aa5.11□□□□□ -1.59
RBM39-220ENST00000455343 TTLL6Q8N841 843 aa5.11□□□□□ -1.59
RBM39-220ENST00000455343 C2CD4AQ8NCU7 369 aaPredicted RBP5.11□□□□□ -1.59
RBM39-220ENST00000455343 CLEC4MQ9H2X3 399 aaPredicted RBP5.11□□□□□ -1.59
RBM39-220ENST00000455343 LIN7BQ9HAP6 207 aa5.11□□□□□ -1.59
RBM39-220ENST00000455343 BRPF3Q9ULD4 1205 aa5.11□□□□□ -1.59
RBM39-220ENST00000455343 PKD1L3Q7Z443 1732 aa5.11□□□□□ -1.59
RBM39-220ENST00000455343 N4BP2Q86UW6 1770 aaPredicted RBP5.11□□□□□ -1.59
RBM39-220ENST00000455343 FAM95CA0A1B0GW59 222 aa5.1□□□□□ -1.59
RBM39-220ENST00000455343 RASSF10A6NK89 507 aa5.1□□□□□ -1.59
RBM39-220ENST00000455343 SERPINB2P05120 415 aa5.1□□□□□ -1.59
RBM39-220ENST00000455343 RGPD2P0DJD1 1756 aa5.1□□□□□ -1.59
RBM39-220ENST00000455343 HSPA8P11142 646 aaKnown RBP5.1□□□□□ -1.59
RBM39-220ENST00000455343 ADH5P11766 374 aa5.1□□□□□ -1.59
RBM39-220ENST00000455343 DRD2P14416 443 aa5.1□□□□□ -1.59
RBM39-220ENST00000455343 BRCA1P38398 1863 aaKnown RBP5.1□□□□□ -1.59
RBM39-220ENST00000455343 SOX4Q06945 474 aaPredicted RBP5.1□□□□□ -1.59
RBM39-220ENST00000455343 SOS1Q07889 1333 aaPredicted RBP5.1□□□□□ -1.59
RBM39-220ENST00000455343 EIF4A2Q14240 407 aaKnown RBP5.1□□□□□ -1.59
RBM39-220ENST00000455343 CPSF6Q16630 551 aaKnown RBP eCLIP5.1□□□□□ -1.59
RBM39-220ENST00000455343 ZNF423Q2M1K9 1284 aa5.1□□□□□ -1.59
RBM39-220ENST00000455343 SPRED3Q2MJR0 410 aa5.1□□□□□ -1.59
RBM39-220ENST00000455343 ZNF831Q5JPB2 1677 aa5.1□□□□□ -1.59
RBM39-220ENST00000455343 KIAA0319Q5VV43 1072 aa5.1□□□□□ -1.59
RBM39-220ENST00000455343 USPL1Q5W0Q7 1092 aa5.1□□□□□ -1.59
RBM39-220ENST00000455343 CDPF1Q6NVV7 123 aa5.1□□□□□ -1.59
RBM39-220ENST00000455343 GIMAP7Q8NHV1 300 aa5.1□□□□□ -1.59
RBM39-220ENST00000455343 TNRC6CQ9HCJ0 1690 aaKnown RBP5.1□□□□□ -1.59
RBM39-220ENST00000455343 LTBP3Q9NS15 1303 aa5.1□□□□□ -1.59
RBM39-220ENST00000455343 POLKQ9UBT6 870 aa5.1□□□□□ -1.59
RBM39-220ENST00000455343 NARFQ9UHQ1 456 aa5.1□□□□□ -1.59
RBM39-220ENST00000455343 ARFGEF1Q9Y6D6 1849 aa5.09□□□□□ -1.59
RBM39-220ENST00000455343 H0YIN7 160 aa5.09□□□□□ -1.59
RBM39-220ENST00000455343 PPM1GO15355 546 aaPredicted RBP5.09□□□□□ -1.59
RBM39-220ENST00000455343 DDNO94850 711 aaPredicted RBP5.09□□□□□ -1.59
RBM39-220ENST00000455343 CTSBP07858 339 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms