RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 GOPCQ9HD26 462 aa13.4□□□□□ -0.26
HDAC9-217ENST00000455069 RABGAP1Q9Y3P9 1069 aa13.4□□□□□ -0.26
HDAC9-217ENST00000455069 ZNFX1Q9P2E3 1918 aaKnown RBP13.4□□□□□ -0.26
HDAC9-217ENST00000455069 F5H6K3 240 aa13.39□□□□□ -0.27
HDAC9-217ENST00000455069 TTLL1O95922 423 aa13.39□□□□□ -0.27
HDAC9-217ENST00000455069 PRMT2P55345 433 aa13.39□□□□□ -0.27
HDAC9-217ENST00000455069 KLRC3Q07444 240 aa13.39□□□□□ -0.27
HDAC9-217ENST00000455069 COG2Q14746 738 aa13.39□□□□□ -0.27
HDAC9-217ENST00000455069 RRP12Q5JTH9 1297 aaKnown RBP13.39□□□□□ -0.27
HDAC9-217ENST00000455069 SH3TC2Q8TF17 1288 aa13.39□□□□□ -0.27
HDAC9-217ENST00000455069 GTF3C2Q8WUA4 911 aaPredicted RBP13.39□□□□□ -0.27
HDAC9-217ENST00000455069 ATG4CQ96DT6 458 aa13.39□□□□□ -0.27
HDAC9-217ENST00000455069 ZNF213O14771 459 aa13.38□□□□□ -0.27
HDAC9-217ENST00000455069 RAD21O60216 631 aa13.38□□□□□ -0.27
HDAC9-217ENST00000455069 FLOT1O75955 427 aa13.38□□□□□ -0.27
HDAC9-217ENST00000455069 HOXD10P28358 340 aa13.38□□□□□ -0.27
HDAC9-217ENST00000455069 FLT3LGP49771 235 aa13.38□□□□□ -0.27
HDAC9-217ENST00000455069 GMCL1P1Q8NEA9 526 aa13.38□□□□□ -0.27
HDAC9-217ENST00000455069 RUFY2Q8WXA3 655 aa13.38□□□□□ -0.27
HDAC9-217ENST00000455069 ZNF333Q96JL9 665 aa13.38□□□□□ -0.27
HDAC9-217ENST00000455069 TOMM22Q9NS69 142 aa13.38□□□□□ -0.27
HDAC9-217ENST00000455069 GJD2Q9UKL4 321 aa13.38□□□□□ -0.27
HDAC9-217ENST00000455069 SYNPO2Q9UMS6 1093 aa13.38□□□□□ -0.27
HDAC9-217ENST00000455069 ADAMTS5Q9UNA0 930 aa13.38□□□□□ -0.27
HDAC9-217ENST00000455069 TAF6LQ9Y6J9 622 aa13.38□□□□□ -0.27
HDAC9-217ENST00000455069 SMCHD1A6NHR9 2005 aa13.38□□□□□ -0.27
HDAC9-217ENST00000455069 PCP11498 1178 aaKnown RBP13.37□□□□□ -0.27
HDAC9-217ENST00000455069 SLC9C1Q4G0N8 1177 aa13.37□□□□□ -0.27
HDAC9-217ENST00000455069 RCSD1Q6JBY9 416 aa13.37□□□□□ -0.27
HDAC9-217ENST00000455069 MFSD6Q6ZSS7 791 aa13.37□□□□□ -0.27
HDAC9-217ENST00000455069 GPR142Q7Z601 462 aa13.37□□□□□ -0.27
HDAC9-217ENST00000455069 REPS2Q8NFH8 660 aa13.37□□□□□ -0.27
HDAC9-217ENST00000455069 ESYT1Q9BSJ8 1104 aa13.37□□□□□ -0.27
HDAC9-217ENST00000455069 TCP11L1Q9NUJ3 509 aa13.37□□□□□ -0.27
HDAC9-217ENST00000455069 PPP1R9AQ9ULJ8 1098 aa13.37□□□□□ -0.27
HDAC9-217ENST00000455069 STX8Q9UNK0 236 aa13.37□□□□□ -0.27
HDAC9-217ENST00000455069 PLXNA1Q9UIW2 1896 aa13.37□□□□□ -0.27
HDAC9-217ENST00000455069 B4E1Z4 1266 aa13.36□□□□□ -0.27
HDAC9-217ENST00000455069 ABCB7O75027 752 aa13.36□□□□□ -0.27
HDAC9-217ENST00000455069 CYP21A2P08686 494 aa13.36□□□□□ -0.27
HDAC9-217ENST00000455069 ELNP15502 786 aa13.36□□□□□ -0.27
HDAC9-217ENST00000455069 GRK4P32298 578 aa13.36□□□□□ -0.27
HDAC9-217ENST00000455069 IRF5Q13568 498 aa13.36□□□□□ -0.27
HDAC9-217ENST00000455069 TMEM132BQ14DG7 1078 aa13.36□□□□□ -0.27
HDAC9-217ENST00000455069 IMMTQ16891 758 aaKnown RBP13.36□□□□□ -0.27
HDAC9-217ENST00000455069 SLFN13Q68D06 897 aa13.36□□□□□ -0.27
HDAC9-217ENST00000455069 RAET1EQ8TD07 263 aa13.36□□□□□ -0.27
HDAC9-217ENST00000455069 COA7Q96BR5 231 aa13.36□□□□□ -0.27
HDAC9-217ENST00000455069 CHMP4CQ96CF2 233 aa13.36□□□□□ -0.27
HDAC9-217ENST00000455069 MOV10L1Q9BXT6 1211 aaKnown RBP13.36□□□□□ -0.27
HDAC9-217ENST00000455069 RNF41Q9H4P4 317 aaPredicted RBP13.36□□□□□ -0.27
HDAC9-217ENST00000455069 HOXC10Q9NYD6 342 aa13.36□□□□□ -0.27
HDAC9-217ENST00000455069 FRMPD3Q5JV73 1810 aa13.35□□□□□ -0.27
HDAC9-217ENST00000455069 VWA5AO00534 786 aa13.35□□□□□ -0.27
HDAC9-217ENST00000455069 KDM4AO75164 1064 aa13.35□□□□□ -0.27
HDAC9-217ENST00000455069 EN2P19622 333 aaPredicted RBP13.35□□□□□ -0.27
HDAC9-217ENST00000455069 MAPK4P31152 587 aa13.35□□□□□ -0.27
HDAC9-217ENST00000455069 MORN1Q5T089 497 aa13.35□□□□□ -0.27
HDAC9-217ENST00000455069 MB21D1Q8N884 522 aa13.35□□□□□ -0.27
HDAC9-217ENST00000455069 USP6NLQ92738 828 aa13.35□□□□□ -0.27
HDAC9-217ENST00000455069 SLF1Q9BQI6 1058 aa13.35□□□□□ -0.27
HDAC9-217ENST00000455069 ZKSCAN3Q9BRR0 538 aa13.35□□□□□ -0.27
HDAC9-217ENST00000455069 LSG1Q9H089 658 aaKnown RBP13.35□□□□□ -0.27
HDAC9-217ENST00000455069 SPATC1LQ9H0A9 340 aa13.35□□□□□ -0.27
HDAC9-217ENST00000455069 PPP4R2Q9NY27 417 aa13.35□□□□□ -0.27
HDAC9-217ENST00000455069 CTNNA3Q9UI47 895 aa13.35□□□□□ -0.27
HDAC9-217ENST00000455069 ZNF214Q9UL59 606 aaPredicted RBP13.35□□□□□ -0.27
HDAC9-217ENST00000455069 ADCY3O60266 1144 aa13.34□□□□□ -0.27
HDAC9-217ENST00000455069 MYCP01106 439 aaPredicted RBP13.34□□□□□ -0.27
HDAC9-217ENST00000455069 MTFR1Q15390 333 aa13.34□□□□□ -0.27
HDAC9-217ENST00000455069 ERICH6BQ5W0A0 696 aa13.34□□□□□ -0.27
HDAC9-217ENST00000455069 STOX1Q6ZVD7 989 aa13.34□□□□□ -0.27
HDAC9-217ENST00000455069 PLEKHH3Q7Z736 793 aa13.34□□□□□ -0.27
HDAC9-217ENST00000455069 NBPF11Q86T75 865 aa13.34□□□□□ -0.27
HDAC9-217ENST00000455069 SLAIN1Q8ND83 568 aa13.34□□□□□ -0.27
HDAC9-217ENST00000455069 ESR2Q92731 530 aa13.34□□□□□ -0.27
HDAC9-217ENST00000455069 MAP4K1Q92918 833 aa13.34□□□□□ -0.27
HDAC9-217ENST00000455069 GMCL1Q96IK5 515 aa13.34□□□□□ -0.27
HDAC9-217ENST00000455069 TMEM47Q9BQJ4 181 aa13.34□□□□□ -0.27
HDAC9-217ENST00000455069 RBM8AQ9Y5S9 174 aaKnown RBP13.34□□□□□ -0.27
HDAC9-217ENST00000455069 LCTP09848 1927 aa13.33□□□□□ -0.28
HDAC9-217ENST00000455069 TOP1P11387 765 aaKnown RBP13.33□□□□□ -0.28
HDAC9-217ENST00000455069 BMP3P12645 472 aa13.33□□□□□ -0.28
HDAC9-217ENST00000455069 ERCC3P19447 782 aa13.33□□□□□ -0.28
HDAC9-217ENST00000455069 MCCP23508 829 aa13.33□□□□□ -0.28
HDAC9-217ENST00000455069 CCNA1P78396 465 aa13.33□□□□□ -0.28
HDAC9-217ENST00000455069 PPP4R3BQ5MIZ7 849 aa13.33□□□□□ -0.28
HDAC9-217ENST00000455069 CYB5R4Q7L1T6 521 aa13.33□□□□□ -0.28
HDAC9-217ENST00000455069 PXYLP1Q8TE99 480 aa13.33□□□□□ -0.28
HDAC9-217ENST00000455069 SOCS4Q8WXH5 440 aa13.33□□□□□ -0.28
HDAC9-217ENST00000455069 TRIB2Q92519 343 aa13.33□□□□□ -0.28
HDAC9-217ENST00000455069 ZSWIM5Q9P217 1185 aa13.33□□□□□ -0.28
HDAC9-217ENST00000455069 MTMR7Q9Y216 660 aa13.33□□□□□ -0.28
HDAC9-217ENST00000455069 MYH6P13533 1939 aa13.33□□□□□ -0.28
HDAC9-217ENST00000455069 INHAP05111 366 aa13.32□□□□□ -0.28
HDAC9-217ENST00000455069 CYP2B6P20813 491 aa13.32□□□□□ -0.28
HDAC9-217ENST00000455069 PTPREP23469 700 aa13.32□□□□□ -0.28
HDAC9-217ENST00000455069 SLC1A4P43007 532 aa13.32□□□□□ -0.28
HDAC9-217ENST00000455069 TRIM32Q13049 653 aa13.32□□□□□ -0.28
HDAC9-217ENST00000455069 COL9A3Q14050 684 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms