RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 PLIN4Q96Q06 1357 aa29.45■■■□□ 2.31
MSH2-203ENST00000454849 ORC4O43929 436 aa29.45■■■□□ 2.31
MSH2-203ENST00000454849 CCL5P13501 91 aa29.45■■■□□ 2.31
MSH2-203ENST00000454849 CHMLP26374 656 aa29.45■■■□□ 2.31
MSH2-203ENST00000454849 TRIM32Q13049 653 aa29.45■■■□□ 2.31
MSH2-203ENST00000454849 MKL1Q969V6 931 aa29.45■■■□□ 2.31
MSH2-203ENST00000454849 NUDT12Q9BQG2 462 aa29.45■■■□□ 2.31
MSH2-203ENST00000454849 UNC93B1Q9H1C4 597 aa29.45■■■□□ 2.31
MSH2-203ENST00000454849 RLFQ13129 1914 aa29.45■■■□□ 2.3
MSH2-203ENST00000454849 SLFN13Q68D06 897 aa29.44■■■□□ 2.3
MSH2-203ENST00000454849 SPATC1LQ9H0A9 340 aa29.44■■■□□ 2.3
MSH2-203ENST00000454849 RNF208Q9H0X6 261 aa29.44■■■□□ 2.3
MSH2-203ENST00000454849 ZMYM6O95789 1325 aa29.44■■■□□ 2.3
MSH2-203ENST00000454849 ZNF213O14771 459 aa29.43■■■□□ 2.3
MSH2-203ENST00000454849 FGRP09769 529 aa29.43■■■□□ 2.3
MSH2-203ENST00000454849 UBXN2AP68543 259 aa29.43■■■□□ 2.3
MSH2-203ENST00000454849 AKNAD1Q5T1N1 836 aa29.43■■■□□ 2.3
MSH2-203ENST00000454849 MFSD6Q6ZSS7 791 aa29.43■■■□□ 2.3
MSH2-203ENST00000454849 PXYLP1Q8TE99 480 aa29.43■■■□□ 2.3
MSH2-203ENST00000454849 MYH4Q9Y623 1939 aa29.42■■■□□ 2.3
MSH2-203ENST00000454849 TMEM132BQ14DG7 1078 aa29.42■■■□□ 2.3
MSH2-203ENST00000454849 MORN1Q5T089 497 aa29.42■■■□□ 2.3
MSH2-203ENST00000454849 RASGRP2Q7LDG7 609 aa29.42■■■□□ 2.3
MSH2-203ENST00000454849 PPP1R9AQ9ULJ8 1098 aa29.42■■■□□ 2.3
MSH2-203ENST00000454849 PLXNB2O15031 1838 aa29.42■■■□□ 2.3
MSH2-203ENST00000454849 ERCC3P19447 782 aa29.41■■■□□ 2.3
MSH2-203ENST00000454849 CCL14Q16627 93 aa29.41■■■□□ 2.3
MSH2-203ENST00000454849 CCDC136Q96JN2 1154 aa29.41■■■□□ 2.3
MSH2-203ENST00000454849 SLF1Q9BQI6 1058 aa29.41■■■□□ 2.3
MSH2-203ENST00000454849 DSCC1Q9BVC3 393 aa29.41■■■□□ 2.3
MSH2-203ENST00000454849 NEDD4P46934 1319 aa29.41■■■□□ 2.3
MSH2-203ENST00000454849 VWA5AO00534 786 aa29.4■■■□□ 2.3
MSH2-203ENST00000454849 MCCP23508 829 aa29.4■■■□□ 2.3
MSH2-203ENST00000454849 SLC4A3P48751 1232 aa29.4■■■□□ 2.3
MSH2-203ENST00000454849 NCAPG2Q86XI2 1143 aa29.4■■■□□ 2.3
MSH2-203ENST00000454849 MB21D1Q8N884 522 aa29.4■■■□□ 2.3
MSH2-203ENST00000454849 STAG1Q8WVM7 1258 aa29.4■■■□□ 2.3
MSH2-203ENST00000454849 TRIB2Q92519 343 aa29.4■■■□□ 2.3
MSH2-203ENST00000454849 USP6NLQ92738 828 aa29.4■■■□□ 2.3
MSH2-203ENST00000454849 KIFC2Q96AC6 838 aa29.4■■■□□ 2.3
MSH2-203ENST00000454849 PTPREP23469 700 aa29.39■■■□□ 2.3
MSH2-203ENST00000454849 PTH1RQ03431 593 aa29.39■■■□□ 2.3
MSH2-203ENST00000454849 GMCL1P1Q8NEA9 526 aa29.39■■■□□ 2.3
MSH2-203ENST00000454849 SOCS4Q8WXH5 440 aa29.39■■■□□ 2.3
MSH2-203ENST00000454849 ZKSCAN3Q9BRR0 538 aa29.39■■■□□ 2.3
MSH2-203ENST00000454849 ADAMTS5Q9UNA0 930 aa29.39■■■□□ 2.3
MSH2-203ENST00000454849 IVNS1ABPQ9Y6Y0 642 aa29.39■■■□□ 2.3
MSH2-203ENST00000454849 RGS2P41220 211 aa29.38■■■□□ 2.29
MSH2-203ENST00000454849 RUFY2Q8WXA3 655 aa29.38■■■□□ 2.29
MSH2-203ENST00000454849 SLC15A5A6NIM6 579 aa29.37■■■□□ 2.29
MSH2-203ENST00000454849 HMGCRP04035 888 aa29.37■■■□□ 2.29
MSH2-203ENST00000454849 BMP3P12645 472 aa29.37■■■□□ 2.29
MSH2-203ENST00000454849 MAP2K5Q13163 448 aa29.37■■■□□ 2.29
MSH2-203ENST00000454849 BRCA2P51587 3418 aa29.36■■■□□ 2.29
MSH2-203ENST00000454849 TMEM232C9JQI7 657 aa29.36■■■□□ 2.29
MSH2-203ENST00000454849 NEFLP07196 543 aa29.36■■■□□ 2.29
MSH2-203ENST00000454849 IMMTQ16891 758 aaKnown RBP29.36■■■□□ 2.29
MSH2-203ENST00000454849 KCTD1Q719H9 257 aa29.36■■■□□ 2.29
MSH2-203ENST00000454849 REPS2Q8NFH8 660 aa29.36■■■□□ 2.29
MSH2-203ENST00000454849 RNF41Q9H4P4 317 aaPredicted RBP29.36■■■□□ 2.29
MSH2-203ENST00000454849 CTNNA3Q9UI47 895 aa29.36■■■□□ 2.29
MSH2-203ENST00000454849 ZKSCAN1P17029 563 aaPredicted RBP29.35■■■□□ 2.29
MSH2-203ENST00000454849 STAT3P40763 770 aa29.35■■■□□ 2.29
MSH2-203ENST00000454849 SLC1A4P43007 532 aa29.35■■■□□ 2.29
MSH2-203ENST00000454849 IKQ13123 557 aaPredicted RBP29.35■■■□□ 2.29
MSH2-203ENST00000454849 CPXCR1Q8N123 301 aa29.35■■■□□ 2.29
MSH2-203ENST00000454849 PRPF38AQ8NAV1 312 aaKnown RBP29.35■■■□□ 2.29
MSH2-203ENST00000454849 NPLOC4Q8TAT6 608 aa29.35■■■□□ 2.29
MSH2-203ENST00000454849 TMEM47Q9BQJ4 181 aa29.35■■■□□ 2.29
MSH2-203ENST00000454849 FLRT1Q9NZU1 646 aa29.35■■■□□ 2.29
MSH2-203ENST00000454849 FEM1BQ9UK73 627 aa29.35■■■□□ 2.29
MSH2-203ENST00000454849 PARP14Q460N5 1801 aa29.35■■■□□ 2.29
MSH2-203ENST00000454849 A0A0G2JMZ2 1700 aa29.34■■■□□ 2.29
MSH2-203ENST00000454849 B4E1Z4 1266 aa29.34■■■□□ 2.29
MSH2-203ENST00000454849 KDM4AO75164 1064 aa29.34■■■□□ 2.29
MSH2-203ENST00000454849 XRCC5P13010 732 aaKnown RBP29.34■■■□□ 2.29
MSH2-203ENST00000454849 SNAP25P60880 206 aa29.34■■■□□ 2.29
MSH2-203ENST00000454849 GRB14Q14449 540 aa29.34■■■□□ 2.29
MSH2-203ENST00000454849 SHISA4Q96DD7 197 aa29.34■■■□□ 2.29
MSH2-203ENST00000454849 DEFB118Q96PH6 123 aa29.34■■■□□ 2.29
MSH2-203ENST00000454849 APBA2Q99767 749 aa29.34■■■□□ 2.29
MSH2-203ENST00000454849 ZNF214Q9UL59 606 aaPredicted RBP29.34■■■□□ 2.29
MSH2-203ENST00000454849 SYNPO2Q9UMS6 1093 aa29.34■■■□□ 2.29
MSH2-203ENST00000454849 COL11A1P12107 1806 aaPredicted RBP29.34■■■□□ 2.29
MSH2-203ENST00000454849 SGSM2O43147 1006 aa29.33■■■□□ 2.29
MSH2-203ENST00000454849 GJB1P08034 283 aa29.33■■■□□ 2.29
MSH2-203ENST00000454849 ADORA2AP29274 412 aa29.33■■■□□ 2.29
MSH2-203ENST00000454849 PPP4R3BQ5MIZ7 849 aa29.33■■■□□ 2.29
MSH2-203ENST00000454849 SHCBP1Q8NEM2 672 aa29.33■■■□□ 2.29
MSH2-203ENST00000454849 ESR2Q92731 530 aa29.33■■■□□ 2.29
MSH2-203ENST00000454849 MROH8Q9H579 483 aa29.33■■■□□ 2.29
MSH2-203ENST00000454849 RAVER2Q9HCJ3 691 aaKnown RBP29.33■■■□□ 2.29
MSH2-203ENST00000454849 CTDP1Q9Y5B0 961 aaPredicted RBP29.33■■■□□ 2.29
MSH2-203ENST00000454849 RAD50Q92878 1312 aa29.33■■■□□ 2.29
MSH2-203ENST00000454849 ZBED4O75132 1171 aa29.32■■■□□ 2.28
MSH2-203ENST00000454849 PRKAR2AP13861 404 aaKnown RBP29.32■■■□□ 2.28
MSH2-203ENST00000454849 CCDC96Q2M329 555 aa29.32■■■□□ 2.28
MSH2-203ENST00000454849 DPP9Q86TI2 863 aa29.32■■■□□ 2.28
MSH2-203ENST00000454849 U2AF1L4Q8WU68 220 aaKnown RBP29.32■■■□□ 2.28
MSH2-203ENST00000454849 GMCL1Q96IK5 515 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms