RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 ZNF654Q8IZM8 581 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 ACER1Q8TDN7 264 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 UPF3BQ9BZI7 483 aaKnown RBP5.83□□□□□ -1.48
RIF1-207ENST00000454583 ZMYND12Q9H0C1 365 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 SH2B1Q9NRF2 756 aaPredicted RBP5.83□□□□□ -1.48
RIF1-207ENST00000454583 PDRG1Q9NUG6 133 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 GGA3Q9NZ52 723 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 ABCF2Q9UG63 623 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 FZD1Q9UP38 647 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 CLEC11AQ9Y240 323 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 EDNRBP24530 442 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 VGLL4Q14135 290 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 PPP2R5BQ15173 497 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 CHST3Q7LGC8 479 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 LDHDQ86WU2 507 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 CEP89Q96ST8 783 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 RNF26Q9BY78 433 aaPredicted RBP5.83□□□□□ -1.48
RIF1-207ENST00000454583 FAM196BA6NMK8 535 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 EEF2P13639 858 aaKnown RBP5.83□□□□□ -1.48
RIF1-207ENST00000454583 PRKAR2AP13861 404 aaKnown RBP5.83□□□□□ -1.48
RIF1-207ENST00000454583 FKBP1BP68106 108 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 FAM47AQ5JRC9 791 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 RASAL3Q86YV0 1011 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 DCAF4Q8WV16 495 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 CCDC17Q96LX7 622 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 TCEANC2Q96MN5 208 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 PPP1R9BQ96SB3 815 aa5.83□□□□□ -1.48
RIF1-207ENST00000454583 IGLV3-22A0A075B6J6 115 aa5.82□□□□□ -1.48
RIF1-207ENST00000454583 RASSF10A6NK89 507 aa5.82□□□□□ -1.48
RIF1-207ENST00000454583 USP17L5A8MUK1 530 aa5.82□□□□□ -1.48
RIF1-207ENST00000454583 KCNJ4P48050 445 aa5.82□□□□□ -1.48
RIF1-207ENST00000454583 NASPP49321 788 aaPredicted RBP5.82□□□□□ -1.48
RIF1-207ENST00000454583 TBC1D10BQ4KMP7 808 aaPredicted RBP5.82□□□□□ -1.48
RIF1-207ENST00000454583 DNAJC5GQ8N7S2 189 aa5.82□□□□□ -1.48
RIF1-207ENST00000454583 FANCBQ8NB91 859 aa5.82□□□□□ -1.48
RIF1-207ENST00000454583 ZCCHC17Q9NP64 241 aaKnown RBP5.82□□□□□ -1.48
RIF1-207ENST00000454583 MCM9Q9NXL9 1143 aa5.82□□□□□ -1.48
RIF1-207ENST00000454583 SAP30BPQ9UHR5 308 aaKnown RBP5.82□□□□□ -1.48
RIF1-207ENST00000454583 ISY1Q9ULR0 285 aaKnown RBP5.82□□□□□ -1.48
RIF1-207ENST00000454583 ELP1O95163 1332 aa5.82□□□□□ -1.48
RIF1-207ENST00000454583 BAZ2BQ9UIF8 2168 aaKnown RBP5.82□□□□□ -1.48
RIF1-207ENST00000454583 XRCC6P12956 609 aaKnown RBP eCLIP5.82□□□□□ -1.48
RIF1-207ENST00000454583 INPP5BP32019 993 aa5.82□□□□□ -1.48
RIF1-207ENST00000454583 CATSPERGQ6ZRH7 1159 aa5.82□□□□□ -1.48
RIF1-207ENST00000454583 ARHGAP27Q6ZUM4 889 aa5.82□□□□□ -1.48
RIF1-207ENST00000454583 ZSCAN31Q96LW9 406 aaPredicted RBP5.82□□□□□ -1.48
RIF1-207ENST00000454583 NAPBQ9H115 298 aa5.82□□□□□ -1.48
RIF1-207ENST00000454583 SLC38A10Q9HBR0 1119 aa5.82□□□□□ -1.48
RIF1-207ENST00000454583 NMRK2Q9NPI5 230 aa5.82□□□□□ -1.48
RIF1-207ENST00000454583 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.82□□□□□ -1.48
RIF1-207ENST00000454583 HPSEQ9Y251 543 aa5.82□□□□□ -1.48
RIF1-207ENST00000454583 STBD1O95210 358 aa5.82□□□□□ -1.48
RIF1-207ENST00000454583 SLC10A3P09131 477 aa5.82□□□□□ -1.48
RIF1-207ENST00000454583 TM4SF4P48230 202 aa5.82□□□□□ -1.48
RIF1-207ENST00000454583 TFAP4Q01664 338 aa5.82□□□□□ -1.48
RIF1-207ENST00000454583 AXDND1Q5T1B0 1012 aaPredicted RBP5.82□□□□□ -1.48
RIF1-207ENST00000454583 DCAF8Q5TAQ9 597 aa5.82□□□□□ -1.48
RIF1-207ENST00000454583 WWC2Q6AWC2 1192 aa5.82□□□□□ -1.48
RIF1-207ENST00000454583 MFSD6Q6ZSS7 791 aa5.82□□□□□ -1.48
RIF1-207ENST00000454583 ENGASEQ8NFI3 743 aa5.82□□□□□ -1.48
RIF1-207ENST00000454583 RBM46Q8TBY0 533 aaKnown RBP5.82□□□□□ -1.48
RIF1-207ENST00000454583 AIFM3Q96NN9 605 aa5.82□□□□□ -1.48
RIF1-207ENST00000454583 SCAF8Q9UPN6 1271 aaKnown RBP5.82□□□□□ -1.48
RIF1-207ENST00000454583 CYP46A1Q9Y6A2 500 aa5.82□□□□□ -1.48
RIF1-207ENST00000454583 MYH9P35579 1960 aaKnown RBP5.82□□□□□ -1.48
RIF1-207ENST00000454583 RGS20O76081 388 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 TTLL1O95922 423 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 TOP1P11387 765 aaKnown RBP5.81□□□□□ -1.48
RIF1-207ENST00000454583 SYT1P21579 422 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 KIF23Q02241 960 aaPredicted RBP5.81□□□□□ -1.48
RIF1-207ENST00000454583 PPATQ06203 517 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 PPIL2Q13356 520 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 SEPT2Q15019 361 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 DLGAP5Q15398 846 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 TREML2Q5T2D2 321 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 SAPCD2Q86UD0 394 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 BRF1Q92994 677 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 CHAMP1Q96JM3 812 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 MTMR9Q96QG7 549 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 LRRC2Q9BYS8 371 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 NCOA5Q9HCD5 579 aaKnown RBP5.81□□□□□ -1.48
RIF1-207ENST00000454583 GJB4Q9NTQ9 266 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 BARHL2Q9NY43 387 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 COL20A1Q9P218 1284 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 MORF4L1Q9UBU8 362 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 CLRN2A0PK11 232 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 NDUFB10O96000 172 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 MMP1P03956 469 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 CYP3A4P08684 503 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 PSMA5P28066 241 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 MDM2Q00987 491 aaPredicted RBP5.81□□□□□ -1.48
RIF1-207ENST00000454583 PPP1R18Q6NYC8 613 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 BLOC1S2Q6QNY1 142 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 CDC37L1Q7L3B6 337 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 KIF12Q96FN5 646 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 VCPKMTQ9H867 229 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 PTPRDP23468 1912 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 TRAF5O00463 557 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 PRDM1O75626 825 aa5.81□□□□□ -1.48
RIF1-207ENST00000454583 HOXD8P13378 290 aaPredicted RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms