RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 PRDM5Q9NQX1 630 aaPredicted RBP28.53■■■□□ 2.16
LYSMD2-202ENST00000454181 TMEM132BQ14DG7 1078 aa28.52■■■□□ 2.16
LYSMD2-202ENST00000454181 DIEXFQ68CQ4 756 aaKnown RBP28.52■■■□□ 2.16
LYSMD2-202ENST00000454181 ZNF236Q9UL36 1845 aa28.51■■■□□ 2.15
LYSMD2-202ENST00000454181 KCTD2Q14681 263 aa28.51■■■□□ 2.15
LYSMD2-202ENST00000454181 ADCYAP1R1P41586 468 aa28.5■■■□□ 2.15
LYSMD2-202ENST00000454181 LRRCC1Q9C099 1032 aa28.5■■■□□ 2.15
LYSMD2-202ENST00000454181 RARBP10826 455 aa28.49■■■□□ 2.15
LYSMD2-202ENST00000454181 STAT3P40763 770 aa28.49■■■□□ 2.15
LYSMD2-202ENST00000454181 LRRC41Q15345 812 aa28.49■■■□□ 2.15
LYSMD2-202ENST00000454181 FAM109BQ6ICB4 259 aaPredicted RBP28.49■■■□□ 2.15
LYSMD2-202ENST00000454181 RIOX2Q8IUF8 465 aa28.49■■■□□ 2.15
LYSMD2-202ENST00000454181 FERMT2Q96AC1 680 aa28.49■■■□□ 2.15
LYSMD2-202ENST00000454181 NRBP1Q9UHY1 535 aa28.49■■■□□ 2.15
LYSMD2-202ENST00000454181 COL6A3P12111 3177 aa28.49■■■□□ 2.15
LYSMD2-202ENST00000454181 SMIM22K7EJ46 135 aa28.48■■■□□ 2.15
LYSMD2-202ENST00000454181 COPB2P35606 906 aa28.48■■■□□ 2.15
LYSMD2-202ENST00000454181 TRIM60Q495X7 471 aa28.48■■■□□ 2.15
LYSMD2-202ENST00000454181 CTR9Q6PD62 1173 aa28.48■■■□□ 2.15
LYSMD2-202ENST00000454181 FBXO28Q9NVF7 368 aa28.48■■■□□ 2.15
LYSMD2-202ENST00000454181 ARPP21Q9UBL0 812 aaPredicted RBP28.48■■■□□ 2.15
LYSMD2-202ENST00000454181 ADAMTS5Q9UNA0 930 aa28.48■■■□□ 2.15
LYSMD2-202ENST00000454181 A0A0G2JMZ2 1700 aa28.47■■■□□ 2.15
LYSMD2-202ENST00000454181 CHGBP05060 677 aa28.47■■■□□ 2.15
LYSMD2-202ENST00000454181 FAM47AQ5JRC9 791 aa28.47■■■□□ 2.15
LYSMD2-202ENST00000454181 XPNPEP3Q9NQH7 507 aa28.47■■■□□ 2.15
LYSMD2-202ENST00000454181 PPP1R9AQ9ULJ8 1098 aa28.47■■■□□ 2.15
LYSMD2-202ENST00000454181 MYH8P13535 1937 aa28.47■■■□□ 2.15
LYSMD2-202ENST00000454181 RLFQ13129 1914 aa28.46■■■□□ 2.15
LYSMD2-202ENST00000454181 POTEB2H3BUK9 544 aa28.46■■■□□ 2.15
LYSMD2-202ENST00000454181 VWA5AO00534 786 aa28.46■■■□□ 2.15
LYSMD2-202ENST00000454181 PGK2P07205 417 aa28.46■■■□□ 2.15
LYSMD2-202ENST00000454181 FAM83BQ5T0W9 1011 aa28.46■■■□□ 2.15
LYSMD2-202ENST00000454181 ZNF697Q5TEC3 545 aa28.46■■■□□ 2.15
LYSMD2-202ENST00000454181 RNF180Q86T96 592 aa28.46■■■□□ 2.15
LYSMD2-202ENST00000454181 TINF2Q9BSI4 451 aa28.46■■■□□ 2.15
LYSMD2-202ENST00000454181 PUS7LQ9H0K6 701 aaKnown RBP28.46■■■□□ 2.15
LYSMD2-202ENST00000454181 MKNK2Q9HBH9 465 aa28.46■■■□□ 2.15
LYSMD2-202ENST00000454181 DIS3Q9Y2L1 958 aaKnown RBP28.46■■■□□ 2.15
LYSMD2-202ENST00000454181 FAM161BQ96MY7 647 aa28.45■■■□□ 2.14
LYSMD2-202ENST00000454181 BAZ2AQ9UIF9 1905 aaKnown RBP28.45■■■□□ 2.14
LYSMD2-202ENST00000454181 SNX17Q15036 470 aa28.44■■■□□ 2.14
LYSMD2-202ENST00000454181 BADQ92934 168 aa28.44■■■□□ 2.14
LYSMD2-202ENST00000454181 CNPY2Q9Y2B0 182 aa28.44■■■□□ 2.14
LYSMD2-202ENST00000454181 SHHQ15465 462 aa28.43■■■□□ 2.14
LYSMD2-202ENST00000454181 STK11IPQ8N1F8 1099 aa28.43■■■□□ 2.14
LYSMD2-202ENST00000454181 RCAN3Q9UKA8 241 aa28.43■■■□□ 2.14
LYSMD2-202ENST00000454181 CTDP1Q9Y5B0 961 aaPredicted RBP28.43■■■□□ 2.14
LYSMD2-202ENST00000454181 DNAH12Q6ZR08 3092 aa28.42■■■□□ 2.14
LYSMD2-202ENST00000454181 MINDY4BA8MYZ0 360 aa28.42■■■□□ 2.14
LYSMD2-202ENST00000454181 SMARCA5O60264 1052 aaPredicted RBP28.42■■■□□ 2.14
LYSMD2-202ENST00000454181 ZNF792Q3KQV3 632 aa28.42■■■□□ 2.14
LYSMD2-202ENST00000454181 C1orf53Q5VUE5 145 aa28.42■■■□□ 2.14
LYSMD2-202ENST00000454181 GPATCH3Q96I76 525 aa28.42■■■□□ 2.14
LYSMD2-202ENST00000454181 STRBPQ96SI9 672 aaKnown RBP28.42■■■□□ 2.14
LYSMD2-202ENST00000454181 SLF1Q9BQI6 1058 aa28.42■■■□□ 2.14
LYSMD2-202ENST00000454181 PDLIM7Q9NR12 457 aa28.42■■■□□ 2.14
LYSMD2-202ENST00000454181 ECHDC1Q9NTX5 307 aa28.42■■■□□ 2.14
LYSMD2-202ENST00000454181 ZNF214Q9UL59 606 aaPredicted RBP28.42■■■□□ 2.14
LYSMD2-202ENST00000454181 PHF24Q9UPV7 400 aa28.42■■■□□ 2.14
LYSMD2-202ENST00000454181 TACC3Q9Y6A5 838 aa28.42■■■□□ 2.14
LYSMD2-202ENST00000454181 PGK1P00558 417 aa28.41■■■□□ 2.14
LYSMD2-202ENST00000454181 AKR1A1P14550 325 aa28.41■■■□□ 2.14
LYSMD2-202ENST00000454181 TLE2Q04725 743 aa28.41■■■□□ 2.14
LYSMD2-202ENST00000454181 SBK1Q52WX2 424 aa28.41■■■□□ 2.14
LYSMD2-202ENST00000454181 DDX11Q96FC9 970 aa28.41■■■□□ 2.14
LYSMD2-202ENST00000454181 TEX13BQ9BXU2 312 aa28.41■■■□□ 2.14
LYSMD2-202ENST00000454181 GIMAP6Q6P9H5 292 aa28.4■■■□□ 2.14
LYSMD2-202ENST00000454181 A0A0C4DFX4 3053 aa28.39■■■□□ 2.14
LYSMD2-202ENST00000454181 SLC4A3P48751 1232 aa28.39■■■□□ 2.14
LYSMD2-202ENST00000454181 C9orf50Q5SZB4 431 aa28.39■■■□□ 2.14
LYSMD2-202ENST00000454181 SNRNP48Q6IEG0 339 aaKnown RBP28.39■■■□□ 2.14
LYSMD2-202ENST00000454181 GUCD1Q96NT3 240 aa28.39■■■□□ 2.14
LYSMD2-202ENST00000454181 NUP88Q99567 741 aaPredicted RBP28.39■■■□□ 2.14
LYSMD2-202ENST00000454181 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.39■■■□□ 2.14
LYSMD2-202ENST00000454181 ZNF287Q9HBT7 754 aa28.39■■■□□ 2.14
LYSMD2-202ENST00000454181 NYAP2Q9P242 653 aa28.39■■■□□ 2.14
LYSMD2-202ENST00000454181 F5H6K3 240 aa28.38■■■□□ 2.13
LYSMD2-202ENST00000454181 TAL1P17542 331 aaPredicted RBP28.38■■■□□ 2.13
LYSMD2-202ENST00000454181 RASA1P20936 1047 aa28.38■■■□□ 2.13
LYSMD2-202ENST00000454181 KLRC3Q07444 240 aa28.38■■■□□ 2.13
LYSMD2-202ENST00000454181 SH3RF1Q7Z6J0 888 aa28.38■■■□□ 2.13
LYSMD2-202ENST00000454181 ZNF444Q8N0Y2 327 aaPredicted RBP28.38■■■□□ 2.13
LYSMD2-202ENST00000454181 KBTBD3Q8NAB2 608 aa28.38■■■□□ 2.13
LYSMD2-202ENST00000454181 PRPF38AQ8NAV1 312 aaKnown RBP28.38■■■□□ 2.13
LYSMD2-202ENST00000454181 REPS2Q8NFH8 660 aa28.38■■■□□ 2.13
LYSMD2-202ENST00000454181 CUL9Q8IWT3 2517 aa28.37■■■□□ 2.13
LYSMD2-202ENST00000454181 TRIM43BA6NCK2 446 aa28.37■■■□□ 2.13
LYSMD2-202ENST00000454181 GSG1L2A8MUP6 293 aa28.37■■■□□ 2.13
LYSMD2-202ENST00000454181 ZBED4O75132 1171 aa28.37■■■□□ 2.13
LYSMD2-202ENST00000454181 CLTBP09497 229 aa28.37■■■□□ 2.13
LYSMD2-202ENST00000454181 MSL3Q8N5Y2 521 aaKnown RBP28.37■■■□□ 2.13
LYSMD2-202ENST00000454181 TRIM43Q96BQ3 446 aaPredicted RBP28.37■■■□□ 2.13
LYSMD2-202ENST00000454181 PQBP1O60828 265 aaKnown RBP28.36■■■□□ 2.13
LYSMD2-202ENST00000454181 APPP05067 770 aa28.36■■■□□ 2.13
LYSMD2-202ENST00000454181 ZNF865P0CJ78 1059 aaPredicted RBP28.36■■■□□ 2.13
LYSMD2-202ENST00000454181 TDO2P48775 406 aa28.36■■■□□ 2.13
LYSMD2-202ENST00000454181 CPXCR1Q8N123 301 aa28.36■■■□□ 2.13
LYSMD2-202ENST00000454181 APPBP2Q92624 585 aa28.36■■■□□ 2.13
LYSMD2-202ENST00000454181 CLIP2Q9UDT6 1046 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms