RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 NYAP2Q9P242 653 aa19.6■□□□□ 0.73
NCKIPSD-208ENST00000454134 F5H6K3 240 aa19.59■□□□□ 0.73
NCKIPSD-208ENST00000454134 NDUFB10O96000 172 aa19.59■□□□□ 0.73
NCKIPSD-208ENST00000454134 ADORA2AP29274 412 aa19.59■□□□□ 0.73
NCKIPSD-208ENST00000454134 KLRC3Q07444 240 aa19.59■□□□□ 0.73
NCKIPSD-208ENST00000454134 TMEM132BQ14DG7 1078 aa19.59■□□□□ 0.73
NCKIPSD-208ENST00000454134 FAM47AQ5JRC9 791 aa19.59■□□□□ 0.73
NCKIPSD-208ENST00000454134 CHD1LQ86WJ1 897 aa19.59■□□□□ 0.73
NCKIPSD-208ENST00000454134 NCAPG2Q86XI2 1143 aa19.59■□□□□ 0.73
NCKIPSD-208ENST00000454134 SHCBP1Q8NEM2 672 aa19.59■□□□□ 0.73
NCKIPSD-208ENST00000454134 CEP95Q96GE4 821 aa19.59■□□□□ 0.73
NCKIPSD-208ENST00000454134 COL11A1P12107 1806 aaPredicted RBP19.58■□□□□ 0.73
NCKIPSD-208ENST00000454134 A0A0D9SFI3 127 aa19.58■□□□□ 0.72
NCKIPSD-208ENST00000454134 TRIM6-TRIM34B2RNG4 842 aa19.58■□□□□ 0.72
NCKIPSD-208ENST00000454134 SLC3A2P08195 630 aaKnown RBP19.58■□□□□ 0.72
NCKIPSD-208ENST00000454134 HOXC6P09630 235 aa19.58■□□□□ 0.72
NCKIPSD-208ENST00000454134 PDE4BQ07343 736 aa19.58■□□□□ 0.72
NCKIPSD-208ENST00000454134 MFSD14CQ5VZR4 134 aa19.58■□□□□ 0.72
NCKIPSD-208ENST00000454134 DPP9Q86TI2 863 aa19.58■□□□□ 0.72
NCKIPSD-208ENST00000454134 INCENPQ9NQS7 918 aa19.58■□□□□ 0.72
NCKIPSD-208ENST00000454134 MTMR4Q9NYA4 1195 aa19.58■□□□□ 0.72
NCKIPSD-208ENST00000454134 PPP1R9AQ9ULJ8 1098 aa19.58■□□□□ 0.72
NCKIPSD-208ENST00000454134 ADAMTS5Q9UNA0 930 aa19.58■□□□□ 0.72
NCKIPSD-208ENST00000454134 VWA5AO00534 786 aa19.57■□□□□ 0.72
NCKIPSD-208ENST00000454134 SLC34A2O95436 690 aa19.57■□□□□ 0.72
NCKIPSD-208ENST00000454134 TSPY3P0CV98 308 aa19.57■□□□□ 0.72
NCKIPSD-208ENST00000454134 TSPY8P0CW00 308 aa19.57■□□□□ 0.72
NCKIPSD-208ENST00000454134 CAPN2P17655 700 aa19.57■□□□□ 0.72
NCKIPSD-208ENST00000454134 CYP2C19P33261 490 aa19.57■□□□□ 0.72
NCKIPSD-208ENST00000454134 TFAP4Q01664 338 aa19.57■□□□□ 0.72
NCKIPSD-208ENST00000454134 NUCB1Q02818 461 aa19.57■□□□□ 0.72
NCKIPSD-208ENST00000454134 CTDSPL2Q05D32 466 aa19.57■□□□□ 0.72
NCKIPSD-208ENST00000454134 LRRC47Q8N1G4 583 aaKnown RBP19.57■□□□□ 0.72
NCKIPSD-208ENST00000454134 RILPL2Q969X0 211 aa19.57■□□□□ 0.72
NCKIPSD-208ENST00000454134 MROH8Q9H579 483 aa19.57■□□□□ 0.72
NCKIPSD-208ENST00000454134 HELLSQ9NRZ9 838 aa19.57■□□□□ 0.72
NCKIPSD-208ENST00000454134 OGDHLQ9ULD0 1010 aa19.57■□□□□ 0.72
NCKIPSD-208ENST00000454134 MYH4Q9Y623 1939 aa19.57■□□□□ 0.72
NCKIPSD-208ENST00000454134 STRNO43815 780 aa19.56■□□□□ 0.72
NCKIPSD-208ENST00000454134 COBLO75128 1261 aa19.56■□□□□ 0.72
NCKIPSD-208ENST00000454134 MNX1P50219 401 aaPredicted RBP19.56■□□□□ 0.72
NCKIPSD-208ENST00000454134 NMIQ13287 307 aaPredicted RBP19.56■□□□□ 0.72
NCKIPSD-208ENST00000454134 NECAB2Q7Z6G3 386 aa19.56■□□□□ 0.72
NCKIPSD-208ENST00000454134 PLEKHM2Q8IWE5 1019 aa19.56■□□□□ 0.72
NCKIPSD-208ENST00000454134 ANKLE1Q8NAG6 615 aa19.56■□□□□ 0.72
NCKIPSD-208ENST00000454134 NEDD1Q8NHV4 660 aa19.56■□□□□ 0.72
NCKIPSD-208ENST00000454134 ZNF236Q9UL36 1845 aa19.55■□□□□ 0.72
NCKIPSD-208ENST00000454134 TTLL1O95922 423 aa19.55■□□□□ 0.72
NCKIPSD-208ENST00000454134 MCMDC2Q4G0Z9 681 aa19.55■□□□□ 0.72
NCKIPSD-208ENST00000454134 HABP4Q5JVS0 413 aaKnown RBP19.55■□□□□ 0.72
NCKIPSD-208ENST00000454134 LHX8Q68G74 356 aa19.55■□□□□ 0.72
NCKIPSD-208ENST00000454134 REPS2Q8NFH8 660 aa19.55■□□□□ 0.72
NCKIPSD-208ENST00000454134 CHMP4CQ96CF2 233 aa19.55■□□□□ 0.72
NCKIPSD-208ENST00000454134 SLF1Q9BQI6 1058 aa19.55■□□□□ 0.72
NCKIPSD-208ENST00000454134 COLQQ9Y215 455 aaPredicted RBP19.55■□□□□ 0.72
NCKIPSD-208ENST00000454134 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.55■□□□□ 0.72
NCKIPSD-208ENST00000454134 TACC3Q9Y6A5 838 aa19.55■□□□□ 0.72
NCKIPSD-208ENST00000454134 PLIN4Q96Q06 1357 aa19.55■□□□□ 0.72
NCKIPSD-208ENST00000454134 FCER1AP12319 257 aa19.54■□□□□ 0.72
NCKIPSD-208ENST00000454134 CNGA1P29973 690 aa19.54■□□□□ 0.72
NCKIPSD-208ENST00000454134 STAT3P40763 770 aa19.54■□□□□ 0.72
NCKIPSD-208ENST00000454134 IRX6P78412 446 aaPredicted RBP19.54■□□□□ 0.72
NCKIPSD-208ENST00000454134 ZNF589Q86UQ0 364 aaPredicted RBP19.54■□□□□ 0.72
NCKIPSD-208ENST00000454134 RIOX2Q8IUF8 465 aa19.54■□□□□ 0.72
NCKIPSD-208ENST00000454134 TRPV1Q8NER1 839 aa19.54■□□□□ 0.72
NCKIPSD-208ENST00000454134 MKL1Q969V6 931 aa19.54■□□□□ 0.72
NCKIPSD-208ENST00000454134 NBPF3Q9H094 633 aa19.54■□□□□ 0.72
NCKIPSD-208ENST00000454134 ZNF214Q9UL59 606 aaPredicted RBP19.54■□□□□ 0.72
NCKIPSD-208ENST00000454134 CEP290O15078 2479 aa19.53■□□□□ 0.72
NCKIPSD-208ENST00000454134 EVI5O60447 810 aa19.53■□□□□ 0.72
NCKIPSD-208ENST00000454134 SLC25A27O95847 323 aa19.53■□□□□ 0.72
NCKIPSD-208ENST00000454134 MMP19Q99542 508 aa19.53■□□□□ 0.72
NCKIPSD-208ENST00000454134 NR2E3Q9Y5X4 410 aa19.53■□□□□ 0.72
NCKIPSD-208ENST00000454134 TSPY2A6NKD2 308 aa19.52■□□□□ 0.72
NCKIPSD-208ENST00000454134 NMT2O60551 498 aa19.52■□□□□ 0.72
NCKIPSD-208ENST00000454134 IGHA2P01877 340 aa19.52■□□□□ 0.72
NCKIPSD-208ENST00000454134 FGAP02671 866 aa19.52■□□□□ 0.72
NCKIPSD-208ENST00000454134 ALX1Q15699 326 aa19.52■□□□□ 0.72
NCKIPSD-208ENST00000454134 OLFML2BQ68BL8 750 aa19.52■□□□□ 0.72
NCKIPSD-208ENST00000454134 SLFN13Q68D06 897 aa19.52■□□□□ 0.72
NCKIPSD-208ENST00000454134 ABRAQ8N0Z2 381 aa19.52■□□□□ 0.72
NCKIPSD-208ENST00000454134 PRPF38AQ8NAV1 312 aaKnown RBP19.52■□□□□ 0.72
NCKIPSD-208ENST00000454134 GMCL1P1Q8NEA9 526 aa19.52■□□□□ 0.72
NCKIPSD-208ENST00000454134 KIFC2Q96AC6 838 aa19.52■□□□□ 0.72
NCKIPSD-208ENST00000454134 OSBPL3Q9H4L5 887 aa19.52■□□□□ 0.72
NCKIPSD-208ENST00000454134 C11orf49Q9H6J7 331 aa19.52■□□□□ 0.72
NCKIPSD-208ENST00000454134 ANAPC4Q9UJX5 808 aa19.52■□□□□ 0.72
NCKIPSD-208ENST00000454134 ALPK3Q96L96 1907 aa19.52■□□□□ 0.72
NCKIPSD-208ENST00000454134 RANBP6O60518 1105 aaKnown RBP19.51■□□□□ 0.71
NCKIPSD-208ENST00000454134 PGK2P07205 417 aa19.51■□□□□ 0.71
NCKIPSD-208ENST00000454134 HSPD1P10809 573 aaKnown RBP19.51■□□□□ 0.71
NCKIPSD-208ENST00000454134 SDSP20132 328 aa19.51■□□□□ 0.71
NCKIPSD-208ENST00000454134 SLC4A3P48751 1232 aa19.51■□□□□ 0.71
NCKIPSD-208ENST00000454134 CHRDL2Q6WN34 429 aa19.51■□□□□ 0.71
NCKIPSD-208ENST00000454134 CPXCR1Q8N123 301 aa19.51■□□□□ 0.71
NCKIPSD-208ENST00000454134 IL17RBQ9NRM6 502 aa19.51■□□□□ 0.71
NCKIPSD-208ENST00000454134 SLC5A4Q9NY91 659 aa19.51■□□□□ 0.71
NCKIPSD-208ENST00000454134 DDX20Q9UHI6 824 aaKnown RBP19.51■□□□□ 0.71
NCKIPSD-208ENST00000454134 ISY1Q9ULR0 285 aaKnown RBP19.51■□□□□ 0.71
NCKIPSD-208ENST00000454134 SYNPO2Q9UMS6 1093 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms