RNA–Protein interactions for RNA: ENST00000453996.6

CTU2-202, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-202ENST00000453996 TMEM39BQ9GZU3 492 aa24.57■■□□□ 1.52
CTU2-202ENST00000453996 FRMPD2Q68DX3 1309 aaPredicted RBP24.57■■□□□ 1.52
CTU2-202ENST00000453996 EEF2P13639 858 aaKnown RBP24.57■■□□□ 1.52
CTU2-202ENST00000453996 NLRP5P59047 1200 aa24.57■■□□□ 1.52
CTU2-202ENST00000453996 L1TD1Q5T7N2 865 aaKnown RBP24.57■■□□□ 1.52
CTU2-202ENST00000453996 GPKOWQ92917 476 aaPredicted RBP eCLIP24.57■■□□□ 1.52
CTU2-202ENST00000453996 RRP36Q96EU6 259 aaKnown RBP24.57■■□□□ 1.52
CTU2-202ENST00000453996 CABP5Q9NP86 173 aa24.57■■□□□ 1.52
CTU2-202ENST00000453996 LETM1O95202 739 aaPredicted RBP24.56■■□□□ 1.52
CTU2-202ENST00000453996 VEGFAP15692 232 aaPredicted RBP24.56■■□□□ 1.52
CTU2-202ENST00000453996 LMNB1P20700 586 aa24.56■■□□□ 1.52
CTU2-202ENST00000453996 CALML3P27482 149 aa24.56■■□□□ 1.52
CTU2-202ENST00000453996 SLC39A14Q15043 492 aa24.56■■□□□ 1.52
CTU2-202ENST00000453996 NPY5RQ15761 445 aa24.56■■□□□ 1.52
CTU2-202ENST00000453996 GAS2L3Q86XJ1 694 aa24.56■■□□□ 1.52
CTU2-202ENST00000453996 FAM177A1Q8N128 213 aaPredicted RBP24.56■■□□□ 1.52
CTU2-202ENST00000453996 CPVLQ9H3G5 476 aa24.56■■□□□ 1.52
CTU2-202ENST00000453996 CNOT7Q9UIV1 285 aaKnown RBP24.56■■□□□ 1.52
CTU2-202ENST00000453996 PCDHA7Q9UN72 937 aa24.56■■□□□ 1.52
CTU2-202ENST00000453996 ZNF543Q08ER8 600 aa24.55■■□□□ 1.52
CTU2-202ENST00000453996 GPATCH4Q5T3I0 446 aaKnown RBP24.55■■□□□ 1.52
CTU2-202ENST00000453996 WWC2Q6AWC2 1192 aa24.55■■□□□ 1.52
CTU2-202ENST00000453996 LRSAM1Q6UWE0 723 aa24.55■■□□□ 1.52
CTU2-202ENST00000453996 CCDC148Q8NFR7 591 aa24.55■■□□□ 1.52
CTU2-202ENST00000453996 SEC63Q9UGP8 760 aaKnown RBP24.55■■□□□ 1.52
CTU2-202ENST00000453996 TBC1D12O60347 775 aa24.54■■□□□ 1.52
CTU2-202ENST00000453996 EGFRP00533 1210 aa24.54■■□□□ 1.52
CTU2-202ENST00000453996 GH2P01242 217 aa24.54■■□□□ 1.52
CTU2-202ENST00000453996 TNFAIP1Q13829 316 aa24.54■■□□□ 1.52
CTU2-202ENST00000453996 HEATR3Q7Z4Q2 680 aa24.54■■□□□ 1.52
CTU2-202ENST00000453996 RIOX1Q9H6W3 641 aa24.54■■□□□ 1.52
CTU2-202ENST00000453996 BARHL2Q9NY43 387 aa24.54■■□□□ 1.52
CTU2-202ENST00000453996 TOB1P50616 345 aaPredicted RBP24.54■■□□□ 1.52
CTU2-202ENST00000453996 ADALQ6DHV7 355 aa24.54■■□□□ 1.52
CTU2-202ENST00000453996 CCAR1Q8IX12 1150 aaKnown RBP24.54■■□□□ 1.52
CTU2-202ENST00000453996 JMYQ8N9B5 988 aa24.54■■□□□ 1.52
CTU2-202ENST00000453996 DDX19AQ9NUU7 478 aaKnown RBP24.54■■□□□ 1.52
CTU2-202ENST00000453996 DACT1Q9NYF0 836 aa24.54■■□□□ 1.52
CTU2-202ENST00000453996 STXBP3O00186 592 aa24.53■■□□□ 1.52
CTU2-202ENST00000453996 RRP1BQ14684 758 aaKnown RBP24.53■■□□□ 1.52
CTU2-202ENST00000453996 PTPAQ15257 358 aa24.53■■□□□ 1.52
CTU2-202ENST00000453996 CCDC96Q2M329 555 aa24.53■■□□□ 1.52
CTU2-202ENST00000453996 TNFRSF25Q93038 417 aa24.53■■□□□ 1.52
CTU2-202ENST00000453996 UBA5Q9GZZ9 404 aa24.53■■□□□ 1.52
CTU2-202ENST00000453996 GPCPD1Q9NPB8 672 aa24.53■■□□□ 1.52
CTU2-202ENST00000453996 PGAP2Q9UHJ9 254 aa24.53■■□□□ 1.52
CTU2-202ENST00000453996 A0A1W2PQ27 194 aa24.52■■□□□ 1.52
CTU2-202ENST00000453996 A0A1W2PQ64 194 aa24.52■■□□□ 1.52
CTU2-202ENST00000453996 A0A1W2PQD8 194 aa24.52■■□□□ 1.52
CTU2-202ENST00000453996 PPP6R2O75170 966 aa24.52■■□□□ 1.52
CTU2-202ENST00000453996 TBC1D10BQ4KMP7 808 aaPredicted RBP24.52■■□□□ 1.52
CTU2-202ENST00000453996 CCDC73Q6ZRK6 1079 aa24.52■■□□□ 1.52
CTU2-202ENST00000453996 SAMD7Q7Z3H4 446 aa24.52■■□□□ 1.52
CTU2-202ENST00000453996 HOMER1Q86YM7 354 aa24.52■■□□□ 1.52
CTU2-202ENST00000453996 CDAN1Q8IWY9 1227 aa24.52■■□□□ 1.52
CTU2-202ENST00000453996 DCAF4Q8WV16 495 aa24.52■■□□□ 1.52
CTU2-202ENST00000453996 NR1I2O75469 434 aa24.52■■□□□ 1.52
CTU2-202ENST00000453996 JAG1P78504 1218 aa24.52■■□□□ 1.52
CTU2-202ENST00000453996 KIF4BQ2VIQ3 1234 aa24.52■■□□□ 1.52
CTU2-202ENST00000453996 GALNT17Q6IS24 598 aa24.52■■□□□ 1.52
CTU2-202ENST00000453996 SIAH1Q8IUQ4 282 aa24.52■■□□□ 1.52
CTU2-202ENST00000453996 CCDC12Q8WUD4 166 aaPredicted RBP24.52■■□□□ 1.52
CTU2-202ENST00000453996 PIGSQ96S52 555 aa24.52■■□□□ 1.52
CTU2-202ENST00000453996 NUP62CLQ9H1M0 184 aa24.52■■□□□ 1.52
CTU2-202ENST00000453996 VAT1LQ9HCJ6 419 aa24.52■■□□□ 1.52
CTU2-202ENST00000453996 PCDHA4Q9UN74 947 aa24.52■■□□□ 1.52
CTU2-202ENST00000453996 MRE11P49959 708 aa24.51■■□□□ 1.51
CTU2-202ENST00000453996 RASA3Q14644 834 aa24.51■■□□□ 1.51
CTU2-202ENST00000453996 TYW1BQ6NUM6 668 aa24.51■■□□□ 1.51
CTU2-202ENST00000453996 BLIDQ8IZY5 108 aa24.51■■□□□ 1.51
CTU2-202ENST00000453996 FSIP1Q8NA03 581 aa24.51■■□□□ 1.51
CTU2-202ENST00000453996 MRPS27Q92552 414 aaKnown RBP24.51■■□□□ 1.51
CTU2-202ENST00000453996 SYT17Q9BSW7 474 aa24.51■■□□□ 1.51
CTU2-202ENST00000453996 NOL7Q9UMY1 257 aaKnown RBP24.51■■□□□ 1.51
CTU2-202ENST00000453996 H7C1D1 291 aa24.5■■□□□ 1.51
CTU2-202ENST00000453996 hCG_1984214I3L0E3 225 aa24.5■■□□□ 1.51
CTU2-202ENST00000453996 SLFN13Q68D06 897 aa24.5■■□□□ 1.51
CTU2-202ENST00000453996 ZNF713Q8N859 430 aaPredicted RBP24.5■■□□□ 1.51
CTU2-202ENST00000453996 DAGLBQ8NCG7 672 aa24.5■■□□□ 1.51
CTU2-202ENST00000453996 GMCL1P1Q8NEA9 526 aa24.5■■□□□ 1.51
CTU2-202ENST00000453996 GOLPH3LQ9H4A5 285 aa24.5■■□□□ 1.51
CTU2-202ENST00000453996 GRPEL1Q9HAV7 217 aa24.5■■□□□ 1.51
CTU2-202ENST00000453996 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.5■■□□□ 1.51
CTU2-202ENST00000453996 SYNPO2Q9UMS6 1093 aa24.5■■□□□ 1.51
CTU2-202ENST00000453996 CEP131Q9UPN4 1083 aa24.5■■□□□ 1.51
CTU2-202ENST00000453996 ATAD5Q96QE3 1844 aa24.49■■□□□ 1.51
CTU2-202ENST00000453996 FAM205CA6NFA0 338 aa24.49■■□□□ 1.51
CTU2-202ENST00000453996 MARCKSP29966 332 aaPredicted RBP24.49■■□□□ 1.51
CTU2-202ENST00000453996 EARS2Q5JPH6 523 aaKnown RBP24.49■■□□□ 1.51
CTU2-202ENST00000453996 GPC2Q8N158 579 aa24.49■■□□□ 1.51
CTU2-202ENST00000453996 RAD21O60216 631 aa24.49■■□□□ 1.51
CTU2-202ENST00000453996 SLC1A4P43007 532 aa24.49■■□□□ 1.51
CTU2-202ENST00000453996 NAPAP54920 295 aa24.49■■□□□ 1.51
CTU2-202ENST00000453996 MAP3K10Q02779 954 aa24.49■■□□□ 1.51
CTU2-202ENST00000453996 FAM160A1Q05DH4 1040 aa24.49■■□□□ 1.51
CTU2-202ENST00000453996 KCTD1Q719H9 257 aa24.49■■□□□ 1.51
CTU2-202ENST00000453996 MIGA2Q7L4E1 593 aa24.49■■□□□ 1.51
CTU2-202ENST00000453996 CLSTN2Q9H4D0 955 aa24.49■■□□□ 1.51
CTU2-202ENST00000453996 HACL1Q9UJ83 578 aa24.49■■□□□ 1.51
CTU2-202ENST00000453996 ZBTB21Q9ULJ3 1066 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms