RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 GRB14Q14449 540 aa16.82■□□□□ 0.28
RFTN1-207ENST00000453536 CCAR1Q8IX12 1150 aaKnown RBP16.82■□□□□ 0.28
RFTN1-207ENST00000453536 APBA2Q99767 749 aa16.82■□□□□ 0.28
RFTN1-207ENST00000453536 CWC22Q9HCG8 908 aaKnown RBP16.82■□□□□ 0.28
RFTN1-207ENST00000453536 CLIP2Q9UDT6 1046 aa16.82■□□□□ 0.28
RFTN1-207ENST00000453536 LAMA4Q16363 1823 aa16.82■□□□□ 0.28
RFTN1-207ENST00000453536 RPTORQ8N122 1335 aa16.81■□□□□ 0.28
RFTN1-207ENST00000453536 WDR46O15213 610 aaKnown RBP16.81■□□□□ 0.28
RFTN1-207ENST00000453536 PDE4AP27815 886 aa16.81■□□□□ 0.28
RFTN1-207ENST00000453536 ADORA2AP29274 412 aa16.81■□□□□ 0.28
RFTN1-207ENST00000453536 RGS2P41220 211 aa16.81■□□□□ 0.28
RFTN1-207ENST00000453536 ANO1Q5XXA6 986 aa16.81■□□□□ 0.28
RFTN1-207ENST00000453536 GIMAP6Q6P9H5 292 aa16.81■□□□□ 0.28
RFTN1-207ENST00000453536 PLEKHM2Q8IWE5 1019 aa16.81■□□□□ 0.28
RFTN1-207ENST00000453536 REPS2Q8NFH8 660 aa16.81■□□□□ 0.28
RFTN1-207ENST00000453536 SOCS4Q8WXH5 440 aa16.81■□□□□ 0.28
RFTN1-207ENST00000453536 DPF3Q92784 378 aa16.81■□□□□ 0.28
RFTN1-207ENST00000453536 NAPBQ9H115 298 aa16.81■□□□□ 0.28
RFTN1-207ENST00000453536 IL25Q9H293 177 aa16.81■□□□□ 0.28
RFTN1-207ENST00000453536 KANSL2Q9H9L4 492 aa16.81■□□□□ 0.28
RFTN1-207ENST00000453536 COLQQ9Y215 455 aaPredicted RBP16.81■□□□□ 0.28
RFTN1-207ENST00000453536 LCTP09848 1927 aa16.8■□□□□ 0.28
RFTN1-207ENST00000453536 PGK2P07205 417 aa16.8■□□□□ 0.28
RFTN1-207ENST00000453536 PRAMEF19Q5SWL8 479 aa16.8■□□□□ 0.28
RFTN1-207ENST00000453536 NCAPG2Q86XI2 1143 aa16.8■□□□□ 0.28
RFTN1-207ENST00000453536 GTF3C2Q8WUA4 911 aaPredicted RBP16.8■□□□□ 0.28
RFTN1-207ENST00000453536 RILPL2Q969X0 211 aa16.8■□□□□ 0.28
RFTN1-207ENST00000453536 EVI5LQ96CN4 794 aa16.8■□□□□ 0.28
RFTN1-207ENST00000453536 NBPF3Q9H094 633 aa16.8■□□□□ 0.28
RFTN1-207ENST00000453536 HMX1Q9NP08 348 aaPredicted RBP16.8■□□□□ 0.28
RFTN1-207ENST00000453536 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.8■□□□□ 0.28
RFTN1-207ENST00000453536 LAMA3Q16787 3333 aa16.8■□□□□ 0.28
RFTN1-207ENST00000453536 PFASO15067 1338 aa16.79■□□□□ 0.28
RFTN1-207ENST00000453536 TRIM6-TRIM34B2RNG4 842 aa16.79■□□□□ 0.28
RFTN1-207ENST00000453536 XRCC5P13010 732 aaKnown RBP16.79■□□□□ 0.28
RFTN1-207ENST00000453536 SNAP25P60880 206 aa16.79■□□□□ 0.28
RFTN1-207ENST00000453536 HAND2P61296 217 aa16.79■□□□□ 0.28
RFTN1-207ENST00000453536 NUCB1Q02818 461 aa16.79■□□□□ 0.28
RFTN1-207ENST00000453536 LHX8Q68G74 356 aa16.79■□□□□ 0.28
RFTN1-207ENST00000453536 CHD1LQ86WJ1 897 aa16.79■□□□□ 0.28
RFTN1-207ENST00000453536 LPAR1Q92633 364 aa16.79■□□□□ 0.28
RFTN1-207ENST00000453536 RIPK3Q9Y572 518 aa16.79■□□□□ 0.28
RFTN1-207ENST00000453536 SLC15A5A6NIM6 579 aa16.78■□□□□ 0.28
RFTN1-207ENST00000453536 F5H6K3 240 aa16.78■□□□□ 0.28
RFTN1-207ENST00000453536 SLC34A2O95436 690 aa16.78■□□□□ 0.28
RFTN1-207ENST00000453536 IGHA2P01877 340 aa16.78■□□□□ 0.28
RFTN1-207ENST00000453536 GNAT2P19087 354 aa16.78■□□□□ 0.28
RFTN1-207ENST00000453536 SLC4A3P48751 1232 aa16.78■□□□□ 0.28
RFTN1-207ENST00000453536 CCNA1P78396 465 aa16.78■□□□□ 0.28
RFTN1-207ENST00000453536 TFAP4Q01664 338 aa16.78■□□□□ 0.28
RFTN1-207ENST00000453536 KLRC3Q07444 240 aa16.78■□□□□ 0.28
RFTN1-207ENST00000453536 CHRDL2Q6WN34 429 aa16.78■□□□□ 0.28
RFTN1-207ENST00000453536 IL17RBQ9NRM6 502 aa16.78■□□□□ 0.28
RFTN1-207ENST00000453536 MTMR4Q9NYA4 1195 aa16.78■□□□□ 0.28
RFTN1-207ENST00000453536 NYAP2Q9P242 653 aa16.78■□□□□ 0.28
RFTN1-207ENST00000453536 ZNF214Q9UL59 606 aaPredicted RBP16.78■□□□□ 0.28
RFTN1-207ENST00000453536 PPP1R9AQ9ULJ8 1098 aa16.78■□□□□ 0.28
RFTN1-207ENST00000453536 MTMR7Q9Y216 660 aa16.78■□□□□ 0.28
RFTN1-207ENST00000453536 PLIN4Q96Q06 1357 aa16.77■□□□□ 0.28
RFTN1-207ENST00000453536 VWA5AO00534 786 aa16.77■□□□□ 0.28
RFTN1-207ENST00000453536 HABP4Q5JVS0 413 aaKnown RBP16.77■□□□□ 0.28
RFTN1-207ENST00000453536 SKAP1Q86WV1 359 aa16.77■□□□□ 0.28
RFTN1-207ENST00000453536 LENG1Q96BZ8 264 aaPredicted RBP16.77■□□□□ 0.28
RFTN1-207ENST00000453536 RWDD1Q9H446 243 aaPredicted RBP16.77■□□□□ 0.28
RFTN1-207ENST00000453536 GOPCQ9HD26 462 aa16.77■□□□□ 0.28
RFTN1-207ENST00000453536 HOXC10Q9NYD6 342 aa16.77■□□□□ 0.28
RFTN1-207ENST00000453536 ZBTB47Q9UFB7 747 aaPredicted RBP16.77■□□□□ 0.28
RFTN1-207ENST00000453536 ADAMTS5Q9UNA0 930 aa16.77■□□□□ 0.28
RFTN1-207ENST00000453536 DDX49Q9Y6V7 483 aaKnown RBP16.77■□□□□ 0.28
RFTN1-207ENST00000453536 TSPY3P0CV98 308 aa16.76■□□□□ 0.27
RFTN1-207ENST00000453536 TSPY8P0CW00 308 aa16.76■□□□□ 0.27
RFTN1-207ENST00000453536 TBC1D10CQ8IV04 446 aa16.76■□□□□ 0.27
RFTN1-207ENST00000453536 ZNF444Q8N0Y2 327 aaPredicted RBP16.76■□□□□ 0.27
RFTN1-207ENST00000453536 NEDD1Q8NHV4 660 aa16.76■□□□□ 0.27
RFTN1-207ENST00000453536 KIFC2Q96AC6 838 aa16.76■□□□□ 0.27
RFTN1-207ENST00000453536 SH2D4AQ9H788 454 aa16.76■□□□□ 0.27
RFTN1-207ENST00000453536 OGDHLQ9ULD0 1010 aa16.76■□□□□ 0.27
RFTN1-207ENST00000453536 IVNS1ABPQ9Y6Y0 642 aa16.76■□□□□ 0.27
RFTN1-207ENST00000453536 FGAP02671 866 aa16.75■□□□□ 0.27
RFTN1-207ENST00000453536 HOXC6P09630 235 aa16.75■□□□□ 0.27
RFTN1-207ENST00000453536 HSPD1P10809 573 aaKnown RBP16.75■□□□□ 0.27
RFTN1-207ENST00000453536 CYBAP13498 195 aa16.75■□□□□ 0.27
RFTN1-207ENST00000453536 SYN1P17600 705 aa16.75■□□□□ 0.27
RFTN1-207ENST00000453536 CNGA1P29973 690 aa16.75■□□□□ 0.27
RFTN1-207ENST00000453536 DPP9Q86TI2 863 aa16.75■□□□□ 0.27
RFTN1-207ENST00000453536 C7orf61Q8IZ16 206 aa16.75■□□□□ 0.27
RFTN1-207ENST00000453536 CPXCR1Q8N123 301 aa16.75■□□□□ 0.27
RFTN1-207ENST00000453536 SLF1Q9BQI6 1058 aa16.75■□□□□ 0.27
RFTN1-207ENST00000453536 NACAP1Q9BZK3 213 aa16.75■□□□□ 0.27
RFTN1-207ENST00000453536 RAVER2Q9HCJ3 691 aaKnown RBP16.75■□□□□ 0.27
RFTN1-207ENST00000453536 ZMYND8Q9ULU4 1186 aaPredicted RBP16.75■□□□□ 0.27
RFTN1-207ENST00000453536 GSPT1P15170 499 aaKnown RBP16.74■□□□□ 0.27
RFTN1-207ENST00000453536 SDSP20132 328 aa16.74■□□□□ 0.27
RFTN1-207ENST00000453536 RRP12Q5JTH9 1297 aaKnown RBP16.74■□□□□ 0.27
RFTN1-207ENST00000453536 SHCBP1Q8NEM2 672 aa16.74■□□□□ 0.27
RFTN1-207ENST00000453536 HELLSQ9NRZ9 838 aa16.74■□□□□ 0.27
RFTN1-207ENST00000453536 RBM27Q9P2N5 1060 aaKnown RBP16.74■□□□□ 0.27
RFTN1-207ENST00000453536 ISY1Q9ULR0 285 aaKnown RBP16.74■□□□□ 0.27
RFTN1-207ENST00000453536 LRRC37A2A6NM11 1700 aa16.73■□□□□ 0.27
RFTN1-207ENST00000453536 NEDD4P46934 1319 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms